메뉴 건너뛰기




Volumn 77, Issue 4, 1996, Pages 783-792

Consistent risk group-associated differences in human immunodeficiency virus type 1 vpr, vpu and V3 sequences despite independent evolution

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CLINICAL ARTICLE; EVOLUTION; GENE MUTATION; GENE SEQUENCE; HIGH RISK POPULATION; HOMOSEXUALITY; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS 1; HUMAN IMMUNODEFICIENCY VIRUS INFECTION; INTRAVENOUS DRUG ABUSE; MALE; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL; VIRUS GENE;

EID: 0029925230     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/0022-1317-77-4-783     Document Type: Article
Times cited : (28)

References (50)
  • 1
    • 0028031329 scopus 로고
    • Analysis of a rape case by direct sequencing of the human immunodeficiency virus type 1 pol and gag genes
    • ALBERT, J., WAHLBERG, J., LEITNER, T., ESCANILLA, D. & UHLEN, M. (1994). Analysis of a rape case by direct sequencing of the human immunodeficiency virus type 1 pol and gag genes. Journal of Virology 68, 5918-5924.
    • (1994) Journal of Virology , vol.68 , pp. 5918-5924
    • Albert, J.1    Wahlberg, J.2    Leitner, T.3    Escanilla, D.4    Uhlen, M.5
  • 2
    • 0028297360 scopus 로고
    • Distinct effect in primary macrophages and lymphocytes of the human immunodeficiency virus type 1 accessory genes vpr, vpu and nef: Mutational analysis of a primary HIV-1 isolate
    • BALLIET, J. W., KOLSON, D. L., EIGER, G., KIM, F. M., MCGANN, K. A., SRINIVASAN, A. & COLLMAN, R. (1994). Distinct effect in primary macrophages and lymphocytes of the human immunodeficiency virus type 1 accessory genes vpr, vpu and nef: mutational analysis of a primary HIV-1 isolate. Virology 200, 623-631.
    • (1994) Virology , vol.200 , pp. 623-631
    • Balliet, J.W.1    Kolson, D.L.2    Eiger, G.3    Kim, F.M.4    Mcgann, K.A.5    Srinivasan, A.6    Collman, R.7
  • 3
    • 0027299295 scopus 로고
    • Antisense phosphorothioate oligodeoxynucleotides targeted to the vpr gene inhibit human immunodeficiency virus type 1 replication in primary human macrophages
    • BALOTTA, C., LUSSO, P., CROWLEY, R., GALLO, R. C. & FRANCHINI, G. (1994). Antisense phosphorothioate oligodeoxynucleotides targeted to the vpr gene inhibit human immunodeficiency virus type 1 replication in primary human macrophages. Journal of Virology 67, 4409-4414.
    • (1994) Journal of Virology , vol.67 , pp. 4409-4414
    • Balotta, C.1    Lusso, P.2    Crowley, R.3    Gallo, R.C.4    Franchini, G.5
  • 6
    • 0028030526 scopus 로고
    • Stimulation of heterologous protein degradation by the Vpu protein of HIV-1 requires the transmembrane and cytoplasmic domains of CD4
    • BUONOCORE, L., TURI, T. G., CRISE, B. & ROSE, J. K. (1994). Stimulation of heterologous protein degradation by the Vpu protein of HIV-1 requires the transmembrane and cytoplasmic domains of CD4. Virology 204, 482-486.
    • (1994) Virology , vol.204 , pp. 482-486
    • Buonocore, L.1    Turi, T.G.2    Crise, B.3    Rose, J.K.4
  • 7
    • 0027174989 scopus 로고
    • Human immunodeficiency virus type 1 Vpu protein induces degradation of CD4 in vitro: The cytoplasmic domain of CD4 contributes to Vpu sensitivity
    • CHEN, M. Y., MALDARELLI, F., KARCZEWSKI, M. K., WILLEY, R L. & STREBEL, K. (1993). Human immunodeficiency virus type 1 Vpu protein induces degradation of CD4 in vitro: the cytoplasmic domain of CD4 contributes to Vpu sensitivity. Journal of Virology 67, 3877-3884.
    • (1993) Journal of Virology , vol.67 , pp. 3877-3884
    • Chen, M.Y.1    Maldarelli, F.2    Karczewski, M.K.3    Willey, R.L.4    Strebel, K.5
  • 10
    • 0023729963 scopus 로고
    • Identification of a protein encoded by the vpu gene of HIV-1
    • COHEN, E. A., TERWILLIGER, E. F., SODROSKI, J. G. & HASELTINE, W. A. (1988). Identification of a protein encoded by the vpu gene of HIV-1. Nature 334, 532-534.
    • (1988) Nature , vol.334 , pp. 532-534
    • Cohen, E.A.1    Terwilliger, E.F.2    Sodroski, J.G.3    Haseltine, W.A.4
  • 12
    • 0028842207 scopus 로고
    • Vpr is required for efficient regulation of human immunodeficiency virus type 1 in mononuclear phagocytes
    • CONNOR, R I., KUAN CHEN, B., CHOE, S. & LANDAU, N. R. (1995). Vpr is required for efficient regulation of human immunodeficiency virus type 1 in mononuclear phagocytes. Virology 206, 935-944.
    • (1995) Virology , vol.206 , pp. 935-944
    • Connor, R.I.1    Kuan Chen, B.2    Choe, S.3    Landau, N.R.4
  • 13
    • 0024359636 scopus 로고
    • Viral protein R of human immunodeficiency virus types 1 and 2 is dispensable for replication and cytopathogenicity in lymphoid cells
    • DEDERA, D., HU, W., VAN DER HEYDEN, N. & RATNER, L. (1989). Viral protein R of human immunodeficiency virus types 1 and 2 is dispensable for replication and cytopathogenicity in lymphoid cells. Journal of Virology 63, 3205-3208.
    • (1989) Journal of Virology , vol.63 , pp. 3205-3208
    • Dedera, D.1    Hu, W.2    Van Der Heyden, N.3    Ratner, L.4
  • 14
    • 0025957804 scopus 로고
    • Evolution of human immunodeficiency virus type 1 nef and long terminal repeat sequences over 4 years in vivo and in vitro
    • DELASSUS, S., CHEYNIER, R. & WAIN-HOBSON, S. (1991). Evolution of human immunodeficiency virus type 1 nef and long terminal repeat sequences over 4 years in vivo and in vitro. Journal of Virology 65, 1, 225-231.
    • (1991) Journal of Virology , vol.65 , Issue.1 , pp. 225-231
    • Delassus, S.1    Cheynier, R.2    Wain-Hobson, S.3
  • 17
    • 0029069857 scopus 로고
    • Dual human immunodeficiency virus type 1 infection and recombination in a dually exposed transfusion recipient
    • DIAZ, R. S., SABINO, E. C., MAYER, A., MOSLEY, J. W. & BUSCH, M. P. (1995). Dual human immunodeficiency virus type 1 infection and recombination in a dually exposed transfusion recipient. Journal of Virology 69, 3273-3281.
    • (1995) Journal of Virology , vol.69 , pp. 3273-3281
    • Diaz, R.S.1    Sabino, E.C.2    Mayer, A.3    Mosley, J.W.4    Busch, M.P.5
  • 21
    • 0026547387 scopus 로고
    • Sequence ordinations: A multivariate analysis approach to analysing large sequence data sets
    • HIGGINS, D. G. (1992) Sequence ordinations: a multivariate analysis approach to analysing large sequence data sets. CABIOS 8, 15-22.
    • (1992) CABIOS , vol.8 , pp. 15-22
    • Higgins, D.G.1
  • 23
    • 0025876179 scopus 로고
    • In vivo sequence variation of the human immunodeficiency virus type 1 env gene: Evidence for recombination among variants found in a single individual
    • HOWELL, R. M., FITZGIBBON, J. E., NOE, M., REN, Z., GOCKE, D. J., SCHWARTZER, T. A. & DUBIN, D. T. (1991). In vivo sequence variation of the human immunodeficiency virus type 1 env gene: evidence for recombination among variants found in a single individual. AIDS Research and Human Retroviruses 7, 869-876.
    • (1991) AIDS Research and Human Retroviruses , vol.7 , pp. 869-876
    • Howell, R.M.1    Fitzgibbon, J.E.2    Noe, M.3    Ren, Z.4    Gocke, D.J.5    Schwartzer, T.A.6    Dubin, D.T.7
  • 24
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitution through comparative studies of nucleotide sequences
    • KIMURA, M. (1980). A simple method for estimating evolutionary rates of base substitution through comparative studies of nucleotide sequences. Journal of Molecular Evolution 16, 111-120.
    • (1980) Journal of Molecular Evolution , vol.16 , pp. 111-120
    • Kimura, M.1
  • 25
    • 0025139857 scopus 로고
    • The human immunodeficiency virus type 1-specific protein vpu is required for efficient virus maturation and release
    • KLIMKAIT, T., STREBEL, K., HOGGAN, M. D., MARTIN, M. A. & ORENSTEIN, J. M. (1990). The human immunodeficiency virus type 1-specific protein vpu is required for efficient virus maturation and release. Journal of Virology 64, 621-629.
    • (1990) Journal of Virology , vol.64 , pp. 621-629
    • Klimkait, T.1    Strebel, K.2    Hoggan, M.D.3    Martin, M.A.4    Orenstein, J.M.5
  • 26
    • 0028198083 scopus 로고
    • Silent mutation pattern in V3 sequences distinguishes virus according to risk group in Europe
    • KUIKEN, C. L. & GOUDSMIT, J. (1994). Silent mutation pattern in V3 sequences distinguishes virus according to risk group in Europe. AIDS Research and Human Retroviruses 10, 319-320.
    • (1994) AIDS Research and Human Retroviruses , vol.10 , pp. 319-320
    • Kuiken, C.L.1    Goudsmit, J.2
  • 28
    • 0030042078 scopus 로고    scopus 로고
    • Restricted intra-patient evolution of genomic RNA encoding the third variable (V3) domain of the HIV-1 envelope
    • KUIKEN, C. L., LUKASHOV, V. V., LEUNISSEN, J. A. M. & GOUDSMIT, J. (1996). Restricted intra-patient evolution of genomic RNA encoding the third variable (V3) domain of the HIV-1 envelope. AIDS 10, 31-37.
    • (1996) AIDS , vol.10 , pp. 31-37
    • Kuiken, C.L.1    Lukashov, V.V.2    Leunissen, J.A.M.3    Goudsmit, J.4
  • 29
    • 0028294049 scopus 로고
    • MEGA: Molecular evolutionary genetics analysis software for microcomputers
    • KUMAR, S., TAMURA, K. & NEI, M. (1994). MEGA: molecular evolutionary genetics analysis software for microcomputers. CABIOS 10, 189-192.
    • (1994) CABIOS , vol.10 , pp. 189-192
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 30
    • 0027410459 scopus 로고
    • Induction of cell differentiation by human immunodeficiency type 1 vpr
    • LEVY, D. N., FERNANDES, L. S., WILLIAMS, W. V. & WEINER, D. B. (1993). Induction of cell differentiation by human immunodeficiency type 1 vpr. Cell 72, 541-550.
    • (1993) Cell , vol.72 , pp. 541-550
    • Levy, D.N.1    Fernandes, L.S.2    Williams, W.V.3    Weiner, D.B.4
  • 32
    • 0028955189 scopus 로고
    • High resolution analysis of the HIV-1 quasispecies in the brain
    • MONKEN, C. E , WU, B. & SRINIVASAN, A. (1995). High resolution analysis of the HIV-1 quasispecies in the brain. AIDS 9, 345-349.
    • (1995) AIDS , vol.9 , pp. 345-349
    • Monken, C.E.1    Wu, B.2    Srinivasan, A.3
  • 34
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • NEI, M. & GOJOBORI, T. (1986). Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Molecular Biology and Evolution 3, 418-426.
    • (1986) Molecular Biology and Evolution , vol.3 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 36
    • 0025879369 scopus 로고
    • Independent fluctuation of human immunodeficiency virus type 1 rev and gp41 quasispecies in vivo
    • PEDROZA MARTINS, L., CHENCINER, N., ÅSJÖ, B., MEYERHANS, A. & WAIN-HOBSON, S. (1991). Independent fluctuation of human immunodeficiency virus type 1 rev and gp41 quasispecies in vivo. Journal of Virology 65, 4502-4507.
    • (1991) Journal of Virology , vol.65 , pp. 4502-4507
    • Pedroza Martins, L.1    Chenciner, N.2    Åsjö, B.3    Meyerhans, A.4    Wain-Hobson, S.5
  • 38
    • 0028142905 scopus 로고
    • Vpu-mediated proteolysis of gp160/CD4 chimeric envelope glycoproteins in the endoplasmic reticulum: Requirement of both the anchor and cytoplasmic domain of CD4
    • RAJA, N. U., VINCENT, M. J. & JABBAR, M. A. (1994). Vpu-mediated proteolysis of gp160/CD4 chimeric envelope glycoproteins in the endoplasmic reticulum: requirement of both the anchor and cytoplasmic domain of CD4. Virology 204, 357-366.
    • (1994) Virology , vol.204 , pp. 357-366
    • Raja, N.U.1    Vincent, M.J.2    Jabbar, M.A.3
  • 41
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • SAITOU, N. & NEI, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 4, 406-425
    • (1987) Molecular Biology and Evolution , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 42
    • 0024381228 scopus 로고
    • Molecular and biochemical analyses of human immunodeficiency virus type 1 vpu protein
    • STREBEL, K., KLIMKAIT, T., MALDARELLI, F. & MARTIN, M. A. (1989). Molecular and biochemical analyses of human immunodeficiency virus type 1 vpu protein. Journal of Virology 63, 3784-3791.
    • (1989) Journal of Virology , vol.63 , pp. 3784-3791
    • Strebel, K.1    Klimkait, T.2    Maldarelli, F.3    Martin, M.A.4
  • 44
    • 0023867667 scopus 로고
    • Prevalence and risk factors of HIV infections among drug users and drug-using prostitutes in Amsterdam
    • VAN DEN HOEK, J. A. R., COUTINHO, R. A., VAN HAASTRECHT, H. J. A., VAN ZADELHOFF, A. W. & GOUDSMIT, J. (1988). Prevalence and risk factors of HIV infections among drug users and drug-using prostitutes in Amsterdam. AIDS 2, 55-60.
    • (1988) AIDS , vol.2 , pp. 55-60
    • Van Den Hoek, J.A.R.1    Coutinho, R.A.2    Van Haastrecht, H.J.A.3    Van Zadelhoff, A.W.4    Goudsmit, J.5
  • 45
    • 0025977774 scopus 로고
    • Selection, recombination and G → A hypermutation of human immunodeficiency virus type 1 genomes
    • VARTANIAN, J. P., MEYERHANS, A., ÅSJÖ, B. & WAIN-HOBSON, S. (1991). Selection, recombination and G → A hypermutation of human immunodeficiency virus type 1 genomes. Journal of Virology 65, 1779-1788.
    • (1991) Journal of Virology , vol.65 , pp. 1779-1788
    • Vartanian, J.P.1    Meyerhans, A.2    Åsjö, B.3    Wain-Hobson, S.4
  • 46
    • 0026655258 scopus 로고
    • Dual regulation of silent and productive infection in monocytes by distinct human immunodeficiency virus type 1 determinants
    • WESTERVELT, P., HENKEL, T., TROWBRIDGE, D. B., ORENSTEIN, J. M , HEUSER, J., GENDELMAN, H. E. & RATNER, L. (1992). Dual regulation of silent and productive infection in monocytes by distinct human immunodeficiency virus type 1 determinants. Journal of Virology 66, 3925-3931.
    • (1992) Journal of Virology , vol.66 , pp. 3925-3931
    • Westervelt, P.1    Henkel, T.2    Trowbridge, D.B.3    Orenstein, J.M.4    Heuser, J.5    Gendelman, H.E.6    Ratner, L.7
  • 47
    • 0028047321 scopus 로고
    • Sequences present in the cytoplasmic domain of CD4 are necessary and sufficient to confer sensitivity to the human immunodeficiency virus type 1 Vpu protein
    • WILLEY, R. L., BUCKLER-WHITE, A. & STREBEL, K. (1994). Sequences present in the cytoplasmic domain of CD4 are necessary and sufficient to confer sensitivity to the human immunodeficiency virus type 1 Vpu protein. Journal of Virology 68, 1207-1212.
    • (1994) Journal of Virology , vol.68 , pp. 1207-1212
    • Willey, R.L.1    Buckler-White, A.2    Strebel, K.3
  • 49
    • 0027422278 scopus 로고
    • Genotypic and phenotypic characterization of HIV-1 in patients with primary infection
    • ZHU, T., MO, H., WANG, N., NAM, D. S , CAO, Y., KOUP, R. A. & HO, D. D. (1993). Genotypic and phenotypic characterization of HIV-1 in patients with primary infection. Science 261, 1179-1181.
    • (1993) Science , vol.261 , pp. 1179-1181
    • Zhu, T.1    Mo, H.2    Wang, N.3    Nam, D.S.4    Cao, Y.5    Koup, R.A.6    Ho, D.D.7
  • 50
    • 0028815682 scopus 로고
    • Evidence for comfection by multiple strains of human immunodeficiency virus type 1 subtype B in an acute seroconvertor
    • ZHU, T , WANG, N., CARR, A., WOLINSKY, S. & HO, D. D. (1995). Evidence for comfection by multiple strains of human immunodeficiency virus type 1 subtype B in an acute seroconvertor. Journal of Virology 69, 1324-1327.
    • (1995) Journal of Virology , vol.69 , pp. 1324-1327
    • Zhu, T.1    Wang, N.2    Carr, A.3    Wolinsky, S.4    Ho, D.D.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.