Effects of modifying the tRNA3Lys anticodon on the initiation of human immunodeficiency virus type 1 reverse transcription

Journal of Virology

Volumn 70, Issue 7, 1996, Pages 4700-4706

  Huang, Yue ^a,b   Shalom, Anne ^a   Li, Zhuo ^a   Wang, Jing ^a   Mak, Johnson ^a,b   Wainberg, Mark A ^a,b   Kleiman, Lawrence ^a,b  

^a MCGILL UNIVERSITY   (Canada)

^b MCGILL UNIVERSITY   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

RNA DIRECTED DNA POLYMERASE; TRANSFER RNA; VIRUS RNA;

ANIMAL CELL; ANTICODON; ARTICLE; DNA SEQUENCE; HEAT ACCLIMATIZATION; HUMAN IMMUNODEFICIENCY VIRUS 1; NONHUMAN; PRIORITY JOURNAL; REVERSE TRANSCRIPTION; RNA PROCESSING; TRANSCRIPTION REGULATION; VIRUS TRANSCRIPTION;

ANTICODON; BASE SEQUENCE; DNA PROBES; HIV-1; HUMANS; MOLECULAR SEQUENCE DATA; MUTATION; NUCLEIC ACID CONFORMATION; RNA; RNA, TRANSFER, AMINO ACYL; RNA, VIRAL; TRANSCRIPTION, GENETIC; VIRION; VIRUS ASSEMBLY;

EID: 0029924723     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/jvi.70.7.4700-4706.1996     Document Type: Article

References (27)

1. Ttp primer is required for efficient initiation of reverse transcription. J. Virol. 66:2464-2472.
2. Aijar, A., Z. Ge, and J. Leis. 1994. A specific orientation of RNA secondary structures is required for initiation of reverse transcription. J. Virol. 68:611-618.
3. Lys3 as primers in an endogenous HIV-1 in vitro reverse transcription/template switching reaction. J. Biol. Chem. 269:14672-14680.
4. Ausubel, F., R. Brent, R. E. Kingston, U. D. Moore, J. G. Seidman, J. A. Smith, and K. Struhl (ed.), 1989. Current protocols in molecular biology, p. 4.8.1-4.8.4. John Wiley & Sons, New York.
5. Lys3. Nucleic Acids Res. 19:751-757.
6. Barat, C., V. Lullien, O. Schatz, G. Keith, and J. L. Darlix. 1989. HIV-1 reverse transcriptase specifically interacts with the anticodon domain of its cognate primer tRNA. EMBO J. 8:3279-3285.
7. Lys3. Nucleic Acids Res. 18:429-435.
8. Boulerice, F., S. Bour, R. Geleziunas, A. Lvovich, and M. A. Wainberg. 1990. High frequency of isolation of defective human immunodeficiency virus type 1 and heterogeneity of viral gene expression in clones of infected U-937 cells. J. Virol. 64:1745-1755.
9. Lys. J. Virol. 69:3090-3097.
10. Lys into human immunodeficiency virus type 1. J. Virol. 68:7676-7683.
11. Lys3 (template/primer) complex. J. Mol. Biol. 247:236-250.
12. Lys3 modulate primer/template loop-loop interaction in the initiation complex of HIV-1 reverse transcription. J. Biol. Chem. 268:25269-25272.
13. Jiang, M., J. Mak, A. Ladha, E. Cohen, M. Klein, B. Rovinski, and L. Kleiman. 1993. Identification of tRNAs incorporated into wild-type and mutant human immunodeficiency virus type 1. J. Virol. 67:3246-3253.
14. Li, X., C. Liang, V. Quan, R. Chandok, L. Kleiman, M. A. Parniak, and M. A. Wainberg. Effect on viral replication of mutations in sequences that flank the primer binding site of HIV-1. Submitted for publication.
15. Li, X., J. Mak, E. J. Arts, Z. Gu, L. Kleiman, M. A. Wainberg, and M. A. Parniak. 1994. Effects of alterations of primer-binding site sequences on human immunodeficiency virus type 1 replication. J. Virol. 68:6198-6206.
16. Lys3 in HIV-1. Submitted for publication.
17. Lys into human immunodeficiency virus type 1 particles. J. Virol. 68:2065-2072.
18. Muller, B., T. Restle, S. Weiss, M. Gautel, G. Sczakie, and R. Goody. 1989. Co-expression of the subunits of the heterodimer of HIV-1 reverse transcriptase in Escherichia coli. J. Biol. Chem. 264:13975-13978.
19. Orita, M., K. Inahana, H. Kanazawa, K. Hayashi, and T. Sekiya. 1989. Detection of polymorphisms of human DNA by gel electrophoresis as singlestrand conformation polymorphisms. Proc. Natl. Acad. Sci. USA 86:2766-2770.
20. Ratner, L., W. Haseltine, R. Patarea, K. L. Livak, B. Starcich, S. Josephs, D. R. Doran, J. A. Rafalski, E. A. Whitehorn, K. Baumeister, L. Ifvanoff, S. R. Petteway, M. L. Pearson, J. A. Lautenberger, T. S. Papas, J. Ghrayeb, N. T. Chang, R. C. Gallo, and F. Wong-Staal. 1985. Complete nucleotide sequence of the AIDS virus, HTLV-111. Nature (London) 313:277-284.
21. Sarih-Cottin, L., B. Bordier, K. Musier-Forsyth, M. Andreola, P. J. Barr, and S. Litvak. 1992. Preferential interaction of human immunodeficiency virus reverse transcriptase with two regions of primer tRNALys as evidenced by footprinting studies and inhibition with synthetic oligoribonucleolides. J. Mol. Biol. 226:1-6.
22. Tsurui, H., Y. Kumazawa, R. Sanokawa, Y. Watanabe, T. Kuroda, A. Wada, K. Watanabe, and T. Shirai. 1994. Batchwise purification of specific tRNAs by a solid-phase DNA probe. Anal. Biochem. 221:166-172.
23. 22a. Wainberg, M. A., et al. Unpublished data.
24. His. J. Virol. 70:966-975.
25. Wakefield, J. K., H. Rhim, and C. D. Morrow. 1994. Minimal sequence requirements of a functional human immunodeficiency virus type 1 primer binding site. J. Virol. 68:1605-1614.
26. Lys. J. Virol. 69:6021-6029.
27. Lys3 complexes. J. Biol. Chem. 268:13617-13624.