메뉴 건너뛰기




Volumn 5, Issue 10, 1996, Pages 2119-2124

Participation of water in Hin recombinase-DNA recognition

Author keywords

osmotic pressure; protein DNA interactions; solvation

Indexed keywords

RECOMBINASE;

EID: 0029921971     PISSN: 09618368     EISSN: None     Source Type: Journal    
DOI: 10.1002/pro.5560051019     Document Type: Article
Times cited : (32)

References (35)
  • 1
    • 0027400112 scopus 로고
    • Probing alamethicin channels with water-soluble polymers. Effect on conductance of channel states
    • Bezrukov SM, Vodyanoy I. 1993. Probing alamethicin channels with water-soluble polymers. Effect on conductance of channel states. Biophys J 64: 16-25.
    • (1993) Biophys J , vol.64 , pp. 16-25
    • Bezrukov, S.M.1    Vodyanoy, I.2
  • 2
    • 33749789858 scopus 로고
    • Bound water molecules mediate antigen-antibody association
    • Bhat TN. 1993. Bound water molecules mediate antigen-antibody association. J Mol Biol 234:519-528.
    • (1993) J Mol Biol , vol.234 , pp. 519-528
    • Bhat, T.N.1
  • 3
    • 0027478518 scopus 로고
    • Assembly of the arc repressor-operator complex: Cooperative interactions between DNA-bound dimers
    • Brown BM, Sauer RT. 1993. Assembly of the arc repressor-operator complex: Cooperative interactions between DNA-bound dimers. Biochemistry 32:1354-1363.
    • (1993) Biochemistry , vol.32 , pp. 1354-1363
    • Brown, B.M.1    Sauer, R.T.2
  • 5
    • 0026346185 scopus 로고
    • Gel retardation
    • Carey J. 1991. Gel retardation. Methods Enzymol 205:103-117.
    • (1991) Methods Enzymol , vol.205 , pp. 103-117
    • Carey, J.1
  • 6
  • 7
    • 0026535070 scopus 로고
    • Protein solvation in allosteric regulation: A water effect on hemoglobin
    • Colombo MF, Rau DC, Parsegian VA. 1992. Protein solvation in allosteric regulation: A water effect on hemoglobin. Science 256:655-659.
    • (1992) Science , vol.256 , pp. 655-659
    • Colombo, M.F.1    Rau, D.C.2    Parsegian, V.A.3
  • 8
    • 0026481153 scopus 로고
    • A critical role of protein-bound water in the catalytic cycle of cytochrome P-450cam
    • DiPrimo C, Sugar SG, Hui Bon Hoa G, Douzou P. 1992. A critical role of protein-bound water in the catalytic cycle of cytochrome P-450cam. FEBS Lett 312:252-254.
    • (1992) FEBS Lett , vol.312 , pp. 252-254
    • DiPrimo, C.1    Sugar, S.G.2    Hui Bon Hoa, G.3    Douzou, P.4
  • 9
    • 0027819337 scopus 로고
    • Hypersensitivity of an enzyme reaction to solvent water
    • Dzingeleski GD, Wolfenden R. 1993. Hypersensitivity of an enzyme reaction to solvent water. Biochemistry 32:9143-9147.
    • (1993) Biochemistry , vol.32 , pp. 9143-9147
    • Dzingeleski, G.D.1    Wolfenden, R.2
  • 10
    • 0028118764 scopus 로고
    • Hin recombinase bound to DNA - The origin of specificity in major and minor groove interactions
    • Feng JA, Johnson RC, Dickerson RE. 1994. Hin recombinase bound to DNA - The origin of specificity in major and minor groove interactions. Science 263:348-355.
    • (1994) Science , vol.263 , pp. 348-355
    • Feng, J.A.1    Johnson, R.C.2    Dickerson, R.E.3
  • 11
    • 0024323026 scopus 로고
    • Measurement of protein-DNA interaction parameters by electrophoresis mobility shift assay
    • Fried M. 1989. Measurement of protein-DNA interaction parameters by electrophoresis mobility shift assay. Electrophoresis 10:366-376.
    • (1989) Electrophoresis , vol.10 , pp. 366-376
    • Fried, M.1
  • 12
    • 0028961741 scopus 로고
    • Water release associated with specific binding of gal repressor
    • Garner MM, Rau DC. 1995. Water release associated with specific binding of gal repressor. EMBO J 14:1257-1263.
    • (1995) EMBO J , vol.14 , pp. 1257-1263
    • Garner, M.M.1    Rau, D.C.2
  • 13
    • 0025040403 scopus 로고
    • The Hin invertasome: Protein-mediated joining of distant recombination sites at the enhancer
    • Heichman KA, Johnson RC. 1990. The Hin invertasome: Protein-mediated joining of distant recombination sites at the enhancer. Science 249:511-517.
    • (1990) Science , vol.249 , pp. 511-517
    • Heichman, K.A.1    Johnson, R.C.2
  • 14
    • 0026748747 scopus 로고
    • Sequence-specific interaction of the Salmonella Hin recombinase in both major and minor grooves of DNA
    • Hughes KT, Gaines PCW, Karlinsey JE, Vinayak R, Simon MI. 1992. Sequence-specific interaction of the Salmonella Hin recombinase in both major and minor grooves of DNA. EMBO J 11:2695-2105.
    • (1992) EMBO J , vol.11 , pp. 2695-12105
    • Hughes, K.T.1    Pcw, G.2    Karlinsey, J.E.3    Vinayak, R.4    Simon, M.I.5
  • 15
    • 0025185780 scopus 로고
    • A nontraditional role for water in the cytochrome c oxidase reaction
    • Kornblatt JA, Hui Bon Hoa G. 1990. A nontraditional role for water in the cytochrome c oxidase reaction. Biochemistry 29:9370-9376.
    • (1990) Biochemistry , vol.29 , pp. 9370-9376
    • Kornblatt, J.A.1    Hui Bon Hoa, G.2
  • 16
    • 0026498010 scopus 로고
    • The interdependence of protein surface topography and bound water molecules revealed by surface accessibility and fractal density measures
    • Kuhn LA, Siani MA, Pique ME, Fisher CL, Getzoff ED, Tainer JA. 1992. The interdependence of protein surface topography and bound water molecules revealed by surface accessibility and fractal density measures. J Mol Biol 228:13-22.
    • (1992) J Mol Biol , vol.228 , pp. 13-22
    • Kuhn, L.A.1    Siani, M.A.2    Pique, M.E.3    Fisher, C.L.4    Getzoff, E.D.5    Tainer, J.A.6
  • 17
    • 0027372621 scopus 로고
    • Tandem binding in crystals of a trp repressor/ operator half-site complex
    • Lawson CL, Carey J. 1993. Tandem binding in crystals of a trp repressor/ operator half-site complex. Nature 366:178-182.
    • (1993) Nature , vol.366 , pp. 178-182
    • Lawson, C.L.1    Carey, J.2
  • 18
    • 0029048413 scopus 로고
    • Structure of Bam HI endonuclease bound to DNA: Partial folding and unfolding on DNA binding
    • Newman M, Strzelecka T, Domer LF, Schildkraut I, Aggarwal AK. 1995. Structure of Bam HI endonuclease bound to DNA: Partial folding and unfolding on DNA binding. Science 269:656-663.
    • (1995) Science , vol.269 , pp. 656-663
    • Newman, M.1    Strzelecka, T.2    Domer, L.F.3    Schildkraut, I.4    Aggarwal, A.K.5
  • 19
    • 0028071439 scopus 로고
    • Arc repressor will not denature under pressure in the absence of water
    • Oliveira AC, Caspar LP, Da Poian AT, Silva JL. 1994. Arc repressor will not denature under pressure in the absence of water. J Mol Biol 240:184-187.
    • (1994) J Mol Biol , vol.240 , pp. 184-187
    • Oliveira, A.C.1    Caspar, L.P.2    Da Poian, A.T.3    Silva, J.L.4
  • 21
    • 0029130871 scopus 로고
    • Macromolecules and water: Probing with osmotic stress
    • Parsegian VA, Rand RP, Rau DC. 1995. Macromolecules and water: Probing with osmotic stress. Methods Enzymol 259:43-94.
    • (1995) Methods Enzymol , vol.259 , pp. 43-94
    • Parsegian, V.A.1    Rand, R.P.2    Rau, D.C.3
  • 22
    • 0000764227 scopus 로고
    • NMR detection of hydration water in the intermolecular interface of a protein-DNA complex
    • Qian YQ, Otting G, Wuthrich K. 1993. NMR detection of hydration water in the intermolecular interface of a protein-DNA complex. J Am Chem Soc 115:1189-1190.
    • (1993) J Am Chem Soc , vol.115 , pp. 1189-1190
    • Qian, Y.Q.1    Otting, G.2    Wuthrich, K.3
  • 23
    • 0026530285 scopus 로고
    • Raising water to new heights
    • Rand RP. 1992. Raising water to new heights. Science 256:618.
    • (1992) Science , vol.256 , pp. 618
    • Rand, R.P.1
  • 24
    • 0027155787 scopus 로고
    • Measured change in protein solvation with substrate binding and turnover
    • Rand RP, Fuller NL, Butko P, Francis G, Nicholls P. 1993. Measured change in protein solvation with substrate binding and turnover. Biochemistry 32:5925-5929.
    • (1993) Biochemistry , vol.32 , pp. 5925-5929
    • Rand, R.P.1    Fuller, N.L.2    Butko, P.3    Francis, G.4    Nicholls, P.5
  • 25
    • 0027372486 scopus 로고
    • Molecular recognition mediated by bound water: A mechanism for star activity of the restriction endonuclease EcoRI
    • Robinson CR, Sligar SG. 1993. Molecular recognition mediated by bound water: A mechanism for star activity of the restriction endonuclease EcoRI. J Mol Biol 254:302-306.
    • (1993) J Mol Biol , vol.254 , pp. 302-306
    • Robinson, C.R.1    Sligar, S.G.2
  • 26
    • 0028210538 scopus 로고
    • Hydrostatic pressure reverses osmotic pressure effects on the specificity of EcoRI-DNA interactions
    • Robinson CR, Sligar SG. 1994. Hydrostatic pressure reverses osmotic pressure effects on the specificity of EcoRI-DNA interactions. Biochemistry 33:3187-3793.
    • (1994) Biochemistry , vol.33 , pp. 3187-3793
    • Robinson, C.R.1    Sligar, S.G.2
  • 27
    • 0028944994 scopus 로고
    • Heterogeneity in molecular recognition by restriction enzymes: Osmotic and hydrostatic pressure effects on PvuII, BamHI, and EcoRV specificity
    • Robinson CR, Sligar SG. 1995a. Heterogeneity in molecular recognition by restriction enzymes: Osmotic and hydrostatic pressure effects on PvuII, BamHI, and EcoRV specificity. Proc Natl Acad Sci USA 92:3444-3448.
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 3444-3448
    • Robinson, C.R.1    Sligar, S.G.2
  • 28
    • 0029144073 scopus 로고
    • Hydrostatic and osmotic pressure as probes of macromolecular recognition
    • Robinson CR, Sligar SG. 1995b. Hydrostatic and osmotic pressure as probes of macromolecular recognition. Methods Enzymol 259:395-426.
    • (1995) Methods Enzymol , vol.259 , pp. 395-426
    • Robinson, C.R.1    Sligar, S.G.2
  • 30
    • 0029910813 scopus 로고    scopus 로고
    • Differences in water release in the binding of EcoRI to specific and nonspecific DNA sequences
    • in press
    • Sidorova NY, Rau DC. 1996. Differences in water release in the binding of EcoRI to specific and nonspecific DNA sequences. Proc Natl Acad Sci USA (in press).
    • (1996) Proc Natl Acad Sci USA
    • Sidorova, N.Y.1    Rau, D.C.2
  • 31
    • 0028931707 scopus 로고
    • The osmotic sensitivity of Netropsin analogue binding to DNA
    • Sidorova NY, Rau D. 1995. The osmotic sensitivity of Netropsin analogue binding to DNA. Biopolymers 55:377-384.
    • (1995) Biopolymers , vol.55 , pp. 377-384
    • Sidorova, N.Y.1    Rau, D.2
  • 32
    • 23444450909 scopus 로고
    • Coupling of local folding to site-specific binding of proteins to DNA
    • Spolar RS, Record MTJ. 1994. Coupling of local folding to site-specific binding of proteins to DNA. Science 263:777-784.
    • (1994) Science , vol.263 , pp. 777-784
    • Spolar, R.S.1    Record, M.T.J.2
  • 34
    • 0023708040 scopus 로고
    • Water: An integral part of nucleic acid structure
    • Westhoff E. 1988. Water: An integral part of nucleic acid structure. Annu Rev Biophys Biophys Chem 17:125-144.
    • (1988) Annu Rev Biophys Biophys Chem , vol.17 , pp. 125-144
    • Westhoff, E.1
  • 35
    • 0028341789 scopus 로고
    • Conservation of solvent-binding sites in 10 crystal forms of T4 lysozyme
    • Zhang XJ, Matthews BW. 1994. Conservation of solvent-binding sites in 10 crystal forms of T4 lysozyme. Protein Sci 3:1031-1039.
    • (1994) Protein Sci , vol.3 , pp. 1031-1039
    • Zhang, X.J.1    Matthews, B.W.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.