-
1
-
-
0023818750
-
Replacements of Pro86 in phage T4 lysozyme extend an α-helix but do not alter protein stability
-
Alber T, Bell JA, Dao-Pin S, Nicholson H, Wozniak JA, Cook S, Matthews BW. 1988. Replacements of Pro86 in phage T4 lysozyme extend an α-helix but do not alter protein stability. Science 239(4840):631-635.
-
(1988)
Science
, vol.239
, Issue.4840
, pp. 631-635
-
-
Alber, T.1
Bell, J.A.2
Dao-Pin, S.3
Nicholson, H.4
Wozniak, J.A.5
Cook, S.6
Matthews, B.W.7
-
2
-
-
0023645792
-
Contributions of hydrogen bonds of Thr 157 to the thermodynamic stability of phage T4 lysozyme
-
Alber T, Sun DP, Wilson K, Wozniak JA, Cook SP, Matthews BW. 1987. Contributions of hydrogen bonds of Thr 157 to the thermodynamic stability of phage T4 lysozyme. Nature 330(6143):41-46.
-
(1987)
Nature
, vol.330
, Issue.6143
, pp. 41-46
-
-
Alber, T.1
Sun, D.P.2
Wilson, K.3
Wozniak, J.A.4
Cook, S.P.5
Matthews, B.W.6
-
3
-
-
0025234587
-
pH-Induced denaturation of proteins: A single salt bridge contribute 3-5 kcal/mol to the free energy of folding of T4 lysozyme
-
Anderson DE, Becktel WJ, Dahlquist FW. 1990. pH-Induced denaturation of proteins: A single salt bridge contribute 3-5 kcal/mol to the free energy of folding of T4 lysozyme. Biochemistry 29:2403-2408.
-
(1990)
Biochemistry
, vol.29
, pp. 2403-2408
-
-
Anderson, D.E.1
Becktel, W.J.2
Dahlquist, F.W.3
-
6
-
-
0024278714
-
Helix geometry in proteins
-
Barlow DJ, Thornton JM. 1988. Helix geometry in proteins. J Mol Biol 201:601-619.
-
(1988)
J Mol Biol
, vol.201
, pp. 601-619
-
-
Barlow, D.J.1
Thornton, J.M.2
-
8
-
-
0009863225
-
A rapid procedure for isolation of DNA fragments from agarose gels
-
Bensen SA. 1984 A rapid procedure for isolation of DNA fragments from agarose gels. BioTechniques 2:66-67.
-
(1984)
BioTechniques
, vol.2
, pp. 66-67
-
-
Bensen, S.A.1
-
9
-
-
0028178528
-
Determination of α-helix propensity within the context of a folded protein. Sites 44 and 131 in bacteriophage T4 lysozyme
-
Blaber M, Zhang XJ, Lindstrom JD, Pepiot SD, Baase WA, Matthews BW. 1994. Determination of α-helix propensity within the context of a folded protein. Sites 44 and 131 in bacteriophage T4 lysozyme. J Mol Biol 235:600-624.
-
(1994)
J Mol Biol
, vol.235
, pp. 600-624
-
-
Blaber, M.1
Zhang, X.J.2
Lindstrom, J.D.3
Pepiot, S.D.4
Baase, W.A.5
Matthews, B.W.6
-
10
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72:248.
-
(1976)
Anal Biochem
, vol.72
, pp. 248
-
-
Bradford, M.1
-
11
-
-
0027764465
-
Contribution of buried hydrogen bonds to protein stability. The crystal structures of two barnase mutants
-
Chen YW, Fersht AR, Henrick K. 1993. Contribution of buried hydrogen bonds to protein stability. The crystal structures of two barnase mutants. J Mol Biol 234:1158-1170.
-
(1993)
J Mol Biol
, vol.234
, pp. 1158-1170
-
-
Chen, Y.W.1
Fersht, A.R.2
Henrick, K.3
-
12
-
-
15844410618
-
-
San Diego, California: Biosym Technologies, Inc.
-
Discover. 2.9/3.1. 1993. San Diego, California: Biosym Technologies, Inc.
-
(1993)
Discover. 2.9/3.1
-
-
-
13
-
-
0026802277
-
Structure of a hinge-bending bacteriophage T4 lysozyme mutant, Ile3.fwdarw.Pro
-
Dixon MM, Nicholson H, Shewchuk L, Baase WA, Matthews BW. 1992. Structure of a hinge-bending bacteriophage T4 lysozyme mutant, Ile3.fwdarw.Pro. J Mol Biol 227:917-933.
-
(1992)
J Mol Biol
, vol.227
, pp. 917-933
-
-
Dixon, M.M.1
Nicholson, H.2
Shewchuk, L.3
Baase, W.A.4
Matthews, B.W.5
-
14
-
-
0026567907
-
Response of a protein structure to cavity-creating mutations and its relation to the hydrophobic effect
-
Eriksson AE, Baase WA, Zhang XJ, Heinz DW, Blaber M, Baldwin EP, Matthews BW. 1992. Response of a protein structure to cavity-creating mutations and its relation to the hydrophobic effect. Science 255(5041): 178-183.
-
(1992)
Science
, vol.255
, Issue.5041
, pp. 178-183
-
-
Eriksson, A.E.1
Baase, W.A.2
Zhang, X.J.3
Heinz, D.W.4
Blaber, M.5
Baldwin, E.P.6
Matthews, B.W.7
-
15
-
-
0025047629
-
A mutant T4 lysozyme displays five different crystal conformations
-
Faber HR, Matthews BW. 1990. A mutant T4 lysozyme displays five different crystal conformations. Nature 348(6298):263-266.
-
(1990)
Nature
, vol.348
, Issue.6298
, pp. 263-266
-
-
Faber, H.R.1
Matthews, B.W.2
-
16
-
-
0000484499
-
Hydrophobic parameters p of amino acid side chains from the partitioning of N-acetyl-amino acid amides
-
Fauchere JL, Pliska V. 1983. Hydrophobic parameters p of amino acid side chains from the partitioning of N-acetyl-amino acid amides. Eur J Med Chem Chim Ther 18:369-315.
-
(1983)
Eur J Med Chem Chim Ther
, vol.18
, pp. 369-1315
-
-
Fauchere, J.L.1
Pliska, V.2
-
17
-
-
0021755525
-
Intrahelical hydrogen bonding of serine, threonine and cysteine residues within α-helixes and its relevance to membrane-bound proteins
-
Gray TM, Matthews BW. 1984. Intrahelical hydrogen bonding of serine, threonine and cysteine residues within α-helixes and its relevance to membrane-bound proteins. J Mol Biol 175:75-81.
-
(1984)
J Mol Biol
, vol.175
, pp. 75-81
-
-
Gray, T.M.1
Matthews, B.W.2
-
18
-
-
0023660935
-
Structural studies of mutants of the lysozyme of bacteriophage T4. The temperature-sensitive mutant protein Thr 157 → Ile
-
Gütter MG, Gray TM, Weaver LH, Alber T, Wilson K, Matthews BW. 1987. Structural studies of mutants of the lysozyme of bacteriophage T4. The temperature-sensitive mutant protein Thr 157 → Ile. J Mol Biol 197: 315-329.
-
(1987)
J Mol Biol
, vol.197
, pp. 315-329
-
-
Gütter, M.G.1
Gray, T.M.2
Weaver, L.H.3
Alber, T.4
Wilson, K.5
Matthews, B.W.6
-
19
-
-
0028354690
-
Accommodation of amino acid insertions in an α-helix of T4 lysozyme. Structural and thermodynamic analysis
-
Heinz DW, Baase WA, Zhang XJ, Blaber M, Dahlquist FW, Matthews BW. 1994. Accommodation of amino acid insertions in an α-helix of T4 lysozyme. Structural and thermodynamic analysis. J Mol Biol 236:869-886.
-
(1994)
J Mol Biol
, vol.236
, pp. 869-886
-
-
Heinz, D.W.1
Baase, W.A.2
Zhang, X.J.3
Blaber, M.4
Dahlquist, F.W.5
Matthews, B.W.6
-
20
-
-
15844379223
-
-
Lake Oswego, Oregon: WaveMetrics
-
Igor. I.26. 1988. Lake Oswego, Oregon: WaveMetrics.
-
(1988)
Igor. I.26
-
-
-
21
-
-
15844373416
-
-
San Diego, California: Biosym Technologies, Inc.
-
Insight II. 2.20. 1993. San Diego, California: Biosym Technologies, Inc.
-
(1993)
Insight II. 2.20
-
-
-
22
-
-
0027484470
-
On achieving better than 1-Ȧ accuracy m a simulation of a large protein: Streptomyces griseus protease a
-
Kitson DH, Avbelj F, Moult J, Nguyen DT, Mertz JE, Hadzi D, Hagler AT. 1993 On achieving better than 1-Ȧ accuracy m a simulation of a large protein: Streptomyces griseus protease A. Proc Natl Acad Sci USA 90:8920-8924.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 8920-8924
-
-
Kitson, D.H.1
Avbelj, F.2
Moult, J.3
Nguyen, D.T.4
Mertz, J.E.5
Hadzi, D.6
Hagler, A.T.7
-
23
-
-
0026080578
-
Correlation between mutational destabilization of phage T4 lysozyme and increased unfolding rates
-
Klemm JD, Wozniak JA, Alber T, Goldenberg DP. 1991. Correlation between mutational destabilization of phage T4 lysozyme and increased unfolding rates. Biochemistry 30:589-594.
-
(1991)
Biochemistry
, vol.30
, pp. 589-594
-
-
Klemm, J.D.1
Wozniak, J.A.2
Alber, T.3
Goldenberg, D.P.4
-
24
-
-
0027995683
-
Detection, delineation, measurement and display of cavities in macromolecular structures
-
Kleywegt GJ, Jones TA. 1994. Detection, delineation, measurement and display of cavities in macromolecular structures. Acta Crystallogr D 50:178-185.
-
(1994)
Acta Crystallogr D
, vol.50
, pp. 178-185
-
-
Kleywegt, G.J.1
Jones, T.A.2
-
25
-
-
0023643422
-
Genetic and structural analysis of the protein stability problem
-
Matthews BW. 1987a. Genetic and structural analysis of the protein stability problem. Biochemistry 26:6885-6888.
-
(1987)
Biochemistry
, vol.26
, pp. 6885-6888
-
-
Matthews, B.W.1
-
26
-
-
0023430560
-
Enhanced protein thermostability from site-directed mutations that decrease the entropy of unfolding
-
Matthews BW, Nicholson H, Becktel WJ. 1987. Enhanced protein thermostability from site-directed mutations that decrease the entropy of unfolding. Proc Natl Acad Sci USA 84:6663-6667.
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, pp. 6663-6667
-
-
Matthews, B.W.1
Nicholson, H.2
Becktel, W.J.3
-
27
-
-
0023517017
-
Effect of point mutations on the folding of globular proteins
-
Matthews CR. 1987b. Effect of point mutations on the folding of globular proteins. Methods Enzymol 154:498-511.
-
(1987)
Methods Enzymol
, vol.154
, pp. 498-511
-
-
Matthews, C.R.1
-
28
-
-
0024836418
-
Expression and nitrogen-15 labeling of proteins for proton and nitrogen-15 nuclear magnetic resonance
-
Muchmore DC, McIntosh LP, Russell CB, Anderson DE, Dahlquist FW. 1989. Expression and nitrogen-15 labeling of proteins for proton and nitrogen-15 nuclear magnetic resonance. Methods Enzymol 177: 44-73.
-
(1989)
Methods Enzymol
, vol.177
, pp. 44-73
-
-
Muchmore, D.C.1
McIntosh, L.P.2
Russell, C.B.3
Anderson, D.E.4
Dahlquist, F.W.5
-
29
-
-
0026955827
-
Analysis of the effectiveness of proline substitutions and glycine replacements in increasing the stability of phage T4 lysozyme
-
Nicholson H, Tronrud DE, Becktel WJ, Matthews BW. 1992. Analysis of the effectiveness of proline substitutions and glycine replacements in increasing the stability of phage T4 lysozyme. Biopolymers 32:1431-1441.
-
(1992)
Biopolymers
, vol.32
, pp. 1431-1441
-
-
Nicholson, H.1
Tronrud, D.E.2
Becktel, W.J.3
Matthews, B.W.4
-
30
-
-
0015505672
-
Molecular basis of mutational hot spot in the lysozyme gene of bacteriophage T4
-
Okada Y, Streisinger G, Owen J, Newton J, Tsugita A, Inouye M. 1972. Molecular basis of mutational hot spot in the lysozyme gene of bacteriophage T4. Nature 236(5346):338-341.
-
(1972)
Nature
, vol.236
, Issue.5346
, pp. 338-341
-
-
Okada, Y.1
Streisinger, G.2
Owen, J.3
Newton, J.4
Tsugita, A.5
Inouye, M.6
-
31
-
-
0025222978
-
A thermodynamic scale for the helix-forming tendencies of the commonly occurring amino acids
-
O'Neil KT, DeGrado WF. 1990. A thermodynamic scale for the helix-forming tendencies of the commonly occurring amino acids. Science 250:646-651.
-
(1990)
Science
, vol.250
, pp. 646-651
-
-
O'Neil, K.T.1
DeGrado, W.F.2
-
32
-
-
0021095347
-
Nucleotide sequence of the lysozyme gene of bacteriophage T4. Analysis of mutations involving repeated sequences
-
Owen JE, Schultz DW, Taylor A, Smith GR. 1983 Nucleotide sequence of the lysozyme gene of bacteriophage T4. Analysis of mutations involving repeated sequences. J Mol Biol 165:229-248.
-
(1983)
J Mol Biol
, vol.165
, pp. 229-248
-
-
Owen, J.E.1
Schultz, D.W.2
Taylor, A.3
Smith, G.R.4
-
33
-
-
0022555885
-
Determination and analysis of urea and guanidine hydrochloride denaturation curves
-
Pace CN. 1986. Determination and analysis of urea and guanidine hydrochloride denaturation curves. Methods Enzymol 131:266-280.
-
(1986)
Methods Enzymol
, vol.131
, pp. 266-280
-
-
Pace, C.N.1
-
34
-
-
0021755764
-
Solvent accessible surface area and excluded volume in proteins. Analytical equations for overlapping spheres and implications for the Hydrophobic effect
-
Richmond TJ. 1984. Solvent accessible surface area and excluded volume in proteins. Analytical equations for overlapping spheres and implications for the Hydrophobic effect. J Mol Biol 178:63-89.
-
(1984)
J Mol Biol
, vol.178
, pp. 63-89
-
-
Richmond, T.J.1
-
37
-
-
0026806846
-
Tolerance of T4 lysozyme to proline substitutions within the long interdomain α-helix illustrates the adaptability of proteins to potentially destabilizing lesions
-
Sauer UH, Sun DP, Matthews BW. 1992. Tolerance of T4 lysozyme to proline substitutions within the long interdomain α-helix illustrates the adaptability of proteins to potentially destabilizing lesions. J Biol Chem 267: 2393-2399.
-
(1992)
J Biol Chem
, vol.267
, pp. 2393-2399
-
-
Sauer, U.H.1
Sun, D.P.2
Matthews, B.W.3
-
38
-
-
0026584344
-
Contribution of hydrogen bonding to the conformational stability of ribonuclease T1
-
Shirley BA, Stanssens P, Hahn U, Pace CN. 1992. Contribution of hydrogen bonding to the conformational stability of ribonuclease T1. Biochemistry 31:725-732.
-
(1992)
Biochemistry
, vol.31
, pp. 725-732
-
-
Shirley, B.A.1
Stanssens, P.2
Hahn, U.3
Pace, C.N.4
-
39
-
-
73049181570
-
Mutations affecting the lysozyme of phage T4
-
Streisinger G, Mukai F, Dreyer WJ, Miller B, Horiuchi S. 1961. Mutations affecting the lysozyme of phage T4. Cold Spring Harbor Symp Quant Biol 26:25-30.
-
(1961)
Cold Spring Harbor Symp Quant Biol
, vol.26
, pp. 25-30
-
-
Streisinger, G.1
Mukai, F.2
Dreyer, W.J.3
Miller, B.4
Horiuchi, S.5
-
41
-
-
0023104358
-
Structure of bacteriophage T4 lysozyme refined at 1.7 Å resolution
-
Weaver LH, Matthews BW. 1987 Structure of bacteriophage T4 lysozyme refined at 1.7 Å resolution. J Mol Biol 193:189-199.
-
(1987)
J Mol Biol
, vol.193
, pp. 189-199
-
-
Weaver, L.H.1
Matthews, B.W.2
-
42
-
-
0025996871
-
Proline in α-helix: Stability and conformation studied by dynamics simulation
-
Yun RH, Anderson A, Hermans J. 1991. Proline in α-helix: Stability and conformation studied by dynamics simulation. Proteins Struct Funct Gener 10:219-228.
-
(1991)
Proteins Struct Funct Gener
, vol.10
, pp. 219-228
-
-
Yun, R.H.1
Anderson, A.2
Hermans, J.3
|