NMR investigations of duplex stability of phosphorothioate and phosphorodithioate DNA analogues modified in both strands

Nucleic Acids Research

Volumn 24, Issue 5, 1996, Pages 829-834

  Jaroszewski, Jerzy W ^a   Clausen, Vicki ^a   Cohen, Jack S ^a,b   Dahl, Otto ^a,c  

^a UNIVERSITY OF COPENHAGEN   (Denmark)

^b GEORGETOWN UNIVERSITY   (United States)

^c UNIVERSITY OF COPENHAGEN   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

DOUBLE STRANDED DNA; OLIGODEOXYNUCLEOTIDE PHOSPHOROTHIOATE; PHOSPHORODITHIOIC ACID DERIVATIVE; SULFUR;

ARTICLE; BASE PAIRING; CONTROLLED STUDY; DNA MODIFICATION; MOLECULAR STABILITY; NUCLEAR OVERHAUSER EFFECT; PHOSPHORUS NUCLEAR MAGNETIC RESONANCE; PRIORITY JOURNAL; PROTON NUCLEAR MAGNETIC RESONANCE;

DNA; MAGNETIC RESONANCE SPECTROSCOPY; MOLECULAR STRUCTURE; ORGANOTHIOPHOSPHORUS COMPOUNDS;

EID: 0029918816     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/24.5.829     Document Type: Article

References (38)

1. Cohen, J. S. (1993) In Crooke, S. T. and Lebleu, B. (eds), Antisense Research and Applications. CRC Press, Boca Raton, pp. 205-221.
2. Cazenave, C. and Hélène, C. (1991) In Mol, J. N. M. and van der Krol, A. R. (eds) Antisense Nucleic Acids and Proteins. Marcel Dekker. New York, pp. 47-95.
3. Uhlmann, E. and Peyman, A. (1990) Chem. Rev., 90, 543-584.
4. Stein, C. A. and Cohen, J. S. (1989) In Cohen, J S (ed.) Oligodeoxynucleondes, Antisense Inhibitors of Gene Expression, MacMillan, London, pp 97-117.
5. Nielsen, J., Brill, W. K.-D. and Caruthers, M. H. (1988) Tetrahedron Lett., 29, 2911-2914.
6. Bjergårde, K. and Dahl, O. (1991) Nucleic Acids Res., 19, 5843-5850
7. Beaton, G., Brill, W. K.-D., Grandas, A., Ma, Y.-X., Nielsen, J., Yau, E. and Caruthers, M H. (1991) Tetrahedron, 47, 2377-2388.
8. Piotto, M. E., Granger, J. N., Cho, Y., Farschtschi, N. and Gorenstein, D. G. (1991) Tetrahedron, 47, 2449-2461.
9. Stein, C. A., Subasinghe, C., Shinozuka, K. and Cohen, J. S. (1988) Nucleic Acids Res., 16, 3209-3221.
10. Ghosh, M. K., Ghosh, K., Dahl, O. and Cohen, J. S. (1993) Nucleic Acids Res., 21, 5761-5766.
11. Cruse, W. B. T., Salisbury, S. A., Brown, T., Cosstick, R., Eckstein, F. and Kennard, O. (1986) J. Mol. Biol., 192, 891-905.
12. LaPlanche, L. A., James, T. L., Powell, C., Wilson, W D., Uznanski, B , Stec, W., Summers, M. F. and Zon, G. (1986) Nucleic Acids. Res., 14, 9081-9092.
13. Jaroszewski, J. W., Syi, J.-L., Maizel, J. and Cohen, J. S. (1992) Anti-Cancer Drug. Des., 7, 253-262.
14. Piotto, M. E., Granger, J. N., Cho, Y and Gorenstein, D. G. (1990) J. Am Chem. Soc., 112, 8632-8634
15. Cho, Y., Luxon, B A. and Gorenstein, D. G. (1993) J. Biomol. Struct. Dyn., 11, 685-702.
16. Iyer, R. P., Egan, W., Regan, J. B. and Beaucage, S. L. (1990) J. Am. Chem. Soc., 112, 1253-1254.
17. Hore, P. J. (1983) J. Magn Res., 55, 283-300.
18. Patel, D J., Kozlowski, S. A , Marky, L. A., Broka, C., Rice, J. A., Itakura, K. and Breslauer, K. J. (1982) Biochemistry, 21, 428-436
19. Hare, D. R., Wemmer, D. E., Chou, S.-H., Drobny, G. and Reid, B. R. (1983) J. Mol. Biol., 171, 319-336.
20. Ott, J. and Eckstein, F. (1985) Biochemistry, 24, 2530-2535.
21. Lycksell, P.-O., Gräslund, A., Claesens, F., McLaughlin, L. W., Larsson, U and Rigler, R. (1987) Nucleic Acids Res., 15, 9011-9025.
22. Sklenar, V. and Bax, A. (1987) J. Am. Chem. Soc., 109, 7525-7526
23. Moe, J. G. and Russu, I. M. (1990) Nucleic Acids Res., 18, 821-827.
24. Moe, J. G. and Russu, I. M. (1992) Biochemistry, 31, 8421-8428.
25. Leijon, M and Gräslund, A. (1992) Nucleic Acids Res., 20, 5339-5343.
26. Wemmer, D. E., Chou, S. H. and Reid, B. R. (1985) Nucleic Acids Res., 13, 468-476
27. Roy, S., Weinstein, S., Borah, B., Nickol, J , Appella, E., Sussman, J. L., Miller, M , Shindo, H. and Cohen, J. S. (1986) Biochemistry, 25, 7417-7423.
28. Roy, S., Sklenar, V., Appella, E. and Cohen, J. S. (1987) Biopolymers, 26, 2041-2052.
29. Ikuta, S., Chattopadhyaya, R., Ito, H., Dickerson, R. E. and Kearns, D. R. (1986) Biochemistry, 25, 4840-4849
30. Williamson, J. R. and Boxer, S. G. (1989) Biochemistry, 28, 2819-2831.
31. Marky, L. A., Blumenfeld, K. S., Kozlowski, S. and Breslauer, K. J. (1983) Biopolymers, 22, 1247-1257
32. Glick, G. D., Osborne, S. E., Knitt, D. S. and Marino, J. P. Jr (1992) J. Am. Chem. Soc., 114, 5447-5448.
33. Pardi, A., Morden, K. M., Patel, D. J. and Tinoco, I. Jr (1982) Biochemistry, 21, 6567-6574.
34. Patel, D. J., Ikuta, S., Kozlowski, S. and Itakura, K. (1983) Proc. Natl Acad. Sci. USA, 80, 2184-2188.
35. Johnston, P. D. and Redfield, A. G. (1981) Biochemistry, 20, 3996-4006.
36. Leroy, J. L., Kochoyan, M., Huynh-Dinh, T and Guéron, M. (1988) J Mol. Biol., 200, 223-238.
37. Stec, W. J., Grajkowski, A., Koziolkiewicz, M and Uznanski, B. (1991) Nucleic Acids Res., 19, 5883-5888.
38. Gao, H., Chidambaram, N., Chen, B. C., Pelham, D. E., Patel, R., Yang, M., Zhou, L., Cook, A. and Cohen, J. S. (1994) Bioconjugate Chem., 5, 445-453.