Sequence of the polypyrimidine tract of the 3′-terminal 3′ splicing signal can affect intron-dependent pre-mRNA processing in vivo

Nucleic Acids Research

Volumn 24, Issue 9, 1996, Pages 1765-1773

  Liu, Xuedong ^a,b,c   Mertz, Janet E ^a  

^a UNIVERSITY OF WISCONSIN MADISON   (United States)

^b UNIVERSITY OF WISCONSIN MADISON   (United States)

^c WHITEHEAD INSTITUTE FOR BIOMEDICAL RESEARCH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BETA GLOBIN; MESSENGER RNA PRECURSOR; NUCLEASE S1; PYRIMIDINE DERIVATIVE;

ANIMAL CELL; ARTICLE; BIOGENESIS; CYTOPLASM; EXON; GENETIC TRANSFECTION; HUMAN; INTRON; MONKEY; NONHUMAN; PLASMID; POLYADENYLATION; PRIORITY JOURNAL; RNA PROCESSING; RNA SPLICING;

ANIMALS; ASPERGILLUS NUCLEASE S1; BASE SEQUENCE; CELL LINE; CELL NUCLEUS; CERCOPITHECUS AETHIOPS; CYTOPLASM; EXONS; GLOBINS; HUMANS; INTRONS; KIDNEY; MOLECULAR SEQUENCE DATA; POLY A; POLYDEOXYRIBONUCLEOTIDES; RNA PRECURSORS; RNA SPLICING; RNA, MESSENGER; SEQUENCE DELETION;

EID: 0029918268     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/24.9.1765     Document Type: Article

References (60)

1. Gruss,P., Lai,C -J., Dhar,R. and Khoury,G. (1979) Proc. Natl. Acad. Sci. USA. 76, 4317-4321.
2. Hamer,D.H. and Leder,P. (1979) Cell 17, 737-747.
3. Callis,J., Fromm,M. and Walbot,V. (1987) Genes Dev. 1, 1183-1200.
4. Buchman,A.R. and Berg,P. (1988) Mol Cell. Biol. 8, 4395-4405.
5. Huang,M.T.F. and Gorman,C.M (1990) Nucleic Acids Res. 18, 937-947.
6. Jonsson,J.J., Foresman,M.D., Wilson,N. and McIvor,R.S. (1992) Nucleic Acids Res. 20, 3191-3198.
7. Nesic,D., Cheng,J. and Maquat,L.E. (1993) Mol. Cell Biol. 13, 3359-3369.
8. Korb,M., Ke,Y. and Johnson,L.F. (1993) Nucleic Acids Res. 21, 5901-5908.
9. Brinster,R.L., Allen,J.M., Behringer,R.R., Gelinas,R.E. and Palmiter,R.D. (1988) Proc. Natl. Acad. Sci. USA 85, 836-840.
10. Palmiter,R.D., Sandgren,E.P., Avarbock,M.R., Allen,D.D. and Brinster,R.L. (1991 Proc. Natl Acad. Sci. USA 88, 478-482.
11. Choi,T., Huang,M , Gorman,C. and Jaenisch,R. (1991) Mol. Cell. Biol. 11, 3070-3074.
12. Ryu,W.-S. and Mertz,J.E. (1989) J. Virol 63, 4386-4394.
13. Ryu,W.-S. (1989) Ph.D. thesis, University of Wisconsin, Madison, WI.
14. Collis,P., Antoniou,M. and Grosveld,F (1990) EMBO J. 9, 233-240.
15. Gruss,P. and Khoury,G, (1980) Nature 286, 634-637.
16. Ryu,W.-S., Gelembiuk,G.W., Liu,X. and Mertz,J.E (unpublished observations).
17. Villarreal,L.P. and White,R.T. (1983) Mol. Cell Biol. 3, 1381-1388.
18. Good,P.J., Welch,R.C., Ryu,W.-S. and Mertz,J.E. (1988) J. Virol. 62, 563-571.
19. Liu,X. and Mertz,J.E. (1993) Nucleic Acids Res. 21, 5256-5263.
20. Liu,X. and Mertz,J.E. (1995) Genes Dev. 9, 1766-1780.
21. Sambrook,J., Fritsch,E.F. and Maniatis,T. (1989) Molecular Cloning: A Laboratory Manual, 2nd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
22. Yu,X.-M , Gelembiuk,G.W., Wang,C.-Y., Ryu,W.-S. and Mertz,J.E. (1991) Nucleic Acids Res. 19, 7231-7234.
23. Liu,X. (1994) Ph.D. thesis. University of Wisconsin, Madison, WI.
24. Dominski,Z. and Kole,R. (1991) Mol. Cell. Biol. 11, 6075-6083.
25. Fu,X.-D., Katz,R.A., Skalka,A.M. and Maniatis,T. (1991) Genes Dev. 5, 211-220.
26. Amendt,B.A., Hesslein,D., Chang,L.-J. and Stoltzfus,C.M. (1994) Mol Cell. Biol. 14, 3960-3970.
27. Bouck,J., Fu,X -D., Skalka,A-M. and Katz,R.A. (1995) Mol. Cell. Biol. 15, 2663-2671.
28. Staffa,A and Cochrane,A. (1995) Mol. Cell. Biol. 15, 4597-4605.
29. Lang,K.M., van Santen,V.L. and Spritz,R.A. (1985) EMBO J. 4, 1991-1996.
30. Hoffman,B.E. and Grabowski,P.J. (1992) Genes Dev. 6, 2554-2568.
31. Kosche,K.A., Dobkin,C. and Bank,A. (1985) Nucleic Acids Res. 13, 7781-7793.
32. Dominski,Z. and Kole,R. (1992) Mol. Cell. Biol 12, 2108-2114.
33. Chiou,H.C., Dabrowski,C. and Alwine,J.C. (1991) J. Virol 65, 6677-6685.
34. Nesic,D. and Maquat,L.E. (1994) Genes Dev. 8, 363-375.
35. Pandey,N.B., Chodchoy,N., Liu,T.-J. and Marzluff,W.F. (1990) Nucleic Acids Res. 18, 3161-3170.
36. Niwa,M., Rose,S D. and Berget,S.M. (1990) Genes Dev. 4, 1552-1559.
37. Niwa,M. and Berget,S.M. (1991) Genes Dev. 5, 2086-2095.
38. Ruskin,B. and Green,M.R. (1985) Nature 317, 732-734.
39. Freyer,G.A , O'Brien,J.P. and Hurwitz,J. (1989) J. Biol. Chem. 264, 14631-14637.
40. Reed,R. (1989) Genes Dev. 3, 2113-2123.
41. Fu,X.-Y., Ge,H. and Manley,J L. (1988) EMBO J. 7, 809-817.
42. Smith,C.W., Patton,J.G. and Nadal-Ginard,B. (1989) Annu. Rev. Genetics 23, 527-577.
43. Roscigno,R F., Weiner,M. and Garcia-Blanco,M.A. (1993) J. Biol. Chem. 268, 11222-11229.
44. Zamore,P.D. and Green,M.R, (1989) Proc. Natl Acad. Sci. USA. 86, 9243-9247
45. Zamore,P.D. and Green,M.R. (1991) EMBO J. 10, 207-214.
46. Gerke,V. and Steitz,J.A. (1986) Cell 47, 973-984
47. Tazi,J., Alibert,C., Temsamani,J., Reveillaud,I., Cathala,G., Brunel,C. and Jeanteur,P. (1986) Cell 47, 755-766.
48. Garcia-Blanco,M.A., Jamison,S.F. and Sharp,P.A. (1989) Genes Dev. 3, 1874-1886.
49. Patton,J.G., Mayer,S.A., Tempst,P. and Nadal-Ginard,B. (1991) Genes Dev. 5, 1237-1251.
50. Swanson,M.S. and Dreyfuss,G. (1988) EMBO J. 7, 3519-3529.
51. Bennett,M, Piñol-Roma,S., Staknis,D., Dreyfuss,G. and Reed,R. (1992) Mol. Cell. Biol. 12, 3165-3175.
52. Bennett,M., Michaud,S., Kingston,J and Reed,R. (1992) Genes Dev. 6, 1986-2000.
53. Chang,D.D. and Sharp,P.A. (1989) Cell 59, 789-795.
54. Legrain,P. and Rosbash,M (1989) Cell 57, 573-583.
55. Krainer,A.R., Maniatis,T., Ruskin,B. and Green,M.R. (1984) Cell 36, 993-1005.
56. Kennedy,I.M., Haddow,J.K. and Clements,J.B. (1991) J. Virol. 65, 2093-2097.
57. Furth,P.A. and Baker,C.C. (1991) J. Virol. 65, 5806-5812.
58. Niwa,M., MacDonald,C.C. and Berget,S.M (1992) Nature 360, 277-280.
59. Furdon,P.J. and Kole,R. (1988) Mol. Cell. Biol. 8, 860-866.
60. Yu,X.-M., Gelembiuk,G.W. and Mertz,J.E. (unpublished observations).