YAC contigs of the Rab1 and wobbler (wr) spinal muscular atrophy gene region on proximal mouse chromosome 11 and of the homologous region on human chromosome 2p

Genomics

Volumn 32, Issue 3, 1996, Pages 447-454

  Wedemeyer, Niels ^a   Lengeling, Andreas ^a   Ronsiek, Melanie ^a   Korthaus, Dirk ^a   Baer, Kristin ^a   Wuttke, Martina ^a   Jockusch, Harald ^a  

^a BIELEFELD UNIVERSITY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SYNTHESIS; ANIMAL CELL; ARTICLE; CHROMOSOMAL LOCALIZATION; CHROMOSOME 11; CHROMOSOME 2P; FLUORESCENCE IN SITU HYBRIDIZATION; GENE LOCUS; GENETIC ANALYSIS; GENETIC CODE; GENETIC CONSERVATION; MOUSE; NONHUMAN; PRIORITY JOURNAL; SPINAL MUSCULAR ATROPHY; SYNTENY; YEAST ARTIFICIAL CHROMOSOME;

EID: 0029911815     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.1996.0140     Document Type: Article

References (33)

1. Anand, R., and Southern, E. M. (1990). Pulsed field gelelectrophoresis. In "Gelelectrophoresis of Nucleic Acids: A Practical Approach" (P. Rickwood and B. D. Hames, Eds.), pp. 101-122, IRL Press, Oxford.
2. Ball, S. T., Moseley, H. J., and Peters, J. (1994). Mor2, supernatant malate dehydrogenase, is linked to wa2 and Hba on mouse chromosome 11 in a region of homology with human chromosome 2p. Genomics 24: 399-400.
3. Bashir, R., Strachan, T., Keers, S., Stephenson, A., Mahjneh, I., Marconi, G., Nashef, L., and Bushby, K. M. D. (1994). A gene for autosomal recessive limb-girdle muscular dystrophy maps to chromosome 2p. Hum. Mol. Genet. 3: 455-457.
4. Bates, G. P., Valdes, J., Hummerich, H., Baxendale, S., Le Paslier, D. L., Monaco, A. P., Tagle, D., MacDonald, M. E., Altherr, M., Ross, M., Brownstein, B. H., Bentley, D., Wasmuth, J. J., Gusella, J. F., Cohen, D., Collins, F., and Lehrach, H. (1992). Characterization of a yeast artificial chromosome contig spanning the Huntington's disease gene candidate region. Nature Genet. 1: 180-187.
5. Berry, R., Stevens, T. J., Walter, N. A. R., Wilcox, A. S., Rubano, T., Hopkins, J. A., Weber, J., Goold, R., Soares, M. B., and Sikela, J. M. (1995). Gene-based sequence-tagged-sides (STSs) as the basis for a human gene map. Nature Genet. 10: 415-423.
6. Bhandari, B., Beckwith, K., and Miller, R. E. (1988). Cloning, nucleotide sequence, and potential regulatory elements of the glutamine synthetase gene from 3T3-L1 adipocytes. Proc. Natl. Acad. Sci. USA 85: 5789-5793.
7. Bhandari, B., Roesler, W. J., DeLisio, K. D., Klemm, D. J., Ross, N. S., and Miller, R. E. (1990). A functional promoter flanks an intronless glutamine synthetase gene. J. Biol. Chem. 266: 7784-7792.
8. Bickmore, W. A., and Sumner, A. T. (1989). Mammalian chromosome banding - An expression of genome organization. Trends Genet. 5: 144-148.
9. Bloom, M. L., Lee, B. K., Birkemeier, C. S., Ma, Y., Zimmer, W. E., Goodman, S. R., Eicher, E. M., and Barker, J. E. (1992). Brain β spectrin isoform 235 (Spnb-2) maps to mouse chromosome 11. Mamm. Genome 3: 293-295.
10. Boguski, M. S., and Schuler, G. D. (1995). ESTablishing a human transcript map. Nature Genet. 10: 369-370.
11. Brownell, E., O'Brien, S. J., Nash, W. G., and Rice, N. (1985). Genetic characterization of human c-rel sequences. Mol. Cell. Biol. 5: 2826-2831.
12. Buckler, A. J., Chang, D. D., Graw, S. L., Brook, J. B., Haber, D. A., Sharp, P. A., and Housman, D. E. (1991). Exon amplification: A strategy to isolate mammalian genes based on RNA splicing. Proc. Natl. Acad. Sci. USA 88: 4005-4009.
13. Collins, F. S. (1995). Positional cloning moves from perditional to traditional. Nature Genet. 9: 347-350.
14. Cox, R. D., Whittington, J., Shedlovsky, A., Connelly, C. S., Dove, W. F., Goldsworthy, M., Larin, Z., and Lehrach, H. (1993). Detailed physical and genetic mapping in the region of plasminogen, D17Rp17e, and quaking. Mamm. Genome 4: 687-694.
15. Des Portes, V., Coulpier, M., Melki, J., and Dreyfus, P. A. (1994). Early detection of mouse wobbler: A model of pathological motoneurone death. Neuro Report 5: 1861-1864.
16. Duchen, L. W., and Strich, S. J. (1968). An hereditary motor neuron disease with progressive denervation of muscle in mouse: The mutant "wobbler". J. Neurol. Neurosurg. Psychiatry 31: 535-542.
17. Green, E. D., and Olson, M. V. (1990). Systematic screening of yeast artificial-chromosome libraries by use of the polymerase chain reaction. Proc. Natl. Acad. Sci. USA 87: 1213-1217.
18. Hamvas, R. M. J., Larin, Z., Brockdorff, N., Rastan, S., Lehrach, H., Chartier, F. L., and Brown, S. D. M. (1993). YAC clone surrounding the Zfx and Pola loci on the mouse X chromosome. Genomics 17: 52-58.
19. Hunter, K. W., Ontiveros, S. D., Watson, M. L., Stanton, V. P., Jr., Gutierrez, P., Bhat, D., Rochelle, J., Graw, S., Ton, C., Schalling, M., Aburantani, H., Brown, S. D. M., Seldin, M. F., and Housman, D. E. (1994). Rapid and efficient construction of yeast artificial chromosome contigs in the mouse genome with interspersed repetitive sequence PCR (IRS-PCR): Generation of a 5-cM, >5 megabase contig on mouse chromosome 1. Mamm. Genome 5: 597-607.
20. Kaupmann, K., Sendtner, M., Stöckli, K. A., and Jockusch, H. (1991). The gene for ciliary neurotrophic factor (CNTF) maps to murine chromosome 19, and its expression is not affected in the hereditary motoneuron disease "wobbler" of the mouse. Eur. J. Neurosci. 3: 1182-1186.
21. Kaupmann, K., Simon-Chazottes, D., Guénet, J.-L., and Jockusch, H. (1992). Wobbler, a mutation affecting motoneuron survival and gonadal functions in the mouse, maps to proximal chromosome 11. Genomics 13: 39-43.
22. Korthaus, D., Wedemeyer, N., Wiegand, Ch., and Jockusch, H. (1996). The gene for cytoplasmatic malate dehydrogenase, Mor2, is closely linked to the wobbler spinal muscular atrophy gene (wr). Mamm. Genome, in press.
23. Kusumi, K., Smith, J. S., Segre, J. A., Koos, D. S., and Lander, E. S. (1993). Construction of a large-insert yeast artificial chromosome library of the mouse genome. Mamm. Genome 4: 391-392.
24. Larin, Z., Monaco, A. P., and Lehrach, H. (1991). Yeast artificial chromosome libraries containing large inserts from mouse and human DNA. Proc. Natl. Acad. Sci. USA 88: 4123-4127.
25. Lengeling, A., Zimmer, W. E., Goodman, S. R., Ma, Y., Bloom, M. L., Bruneau, G., Krieger, M., Thibault, J., Kaupmann, K., and Jockusch, H. (1994). Exclusion of two candidate genes, Spnb-2 and Ddc, for the wobbler spinal muscular atrophy gene on proximal mouse chromosome 11. Mamm. Genome 5: 163-166.
26. Nowak, R. (1995). Genome mappers have a hot time at Cold Spring Harbor. Science 268: 1134-1135.
27. Passos-Bueno, M. R., Bashir, R., Moreira, E. S., Vainzof, M., Marie, S. K., Vasquez, L., Iughetti, P., Bakker, E., Keers, S., Stephenson, A., Strachan, T., Mahneh, E., Weissenbach, J., Bushby, K., and Zatz, M. (1995). Confirmation of the 2p locus for the mild autosomal recessive limb-girdle muscular dystrophy gene (LGMD2B) in three families allows refinement of the candidate region. Genomics 27: 192-195.
28. Patil, N., Cox, D. R., Bhat, D., Faham, M., Myers, R. M., and Peterson, A. S. (1995). A potassium channel mutation in weaver mice implicates membrane excitability in granule cell differentiation. Nature Genet. 11: 126-129.
29. Polaina, J., and Adam, A. C. (1991). A fast procedure for yeast DNA purification. Nucleic Acids Res. 19: 5443.
30. Silverman, G. A., Ye, R. D., Pollock, K. M., Sadler, J. E., and Korsmeyer, S. J. (1989). Use of yeast artificial chromosome clones for mapping and walking within human chromosome segment 18q21.3. Proc. Natl. Acad. Sci. USA 86: 7485-7489.
31. Walter, M. A., Spillett, D. J., Thomas, P., Weissenbach, J., and Goodfellow, P. A. (1994). A method for constructing radiation hybrid maps of whole genomes. Nature Genet. 7: 22-28.
32. Wichmann, H., Disela, C., Haubruck, H., and Gallwitz, D. (1989). Nucleotide sequence of the mouse ypt1 gene encoding a ras-related GTP-binding protein. Nucleic Acids Res. 17: 6737-6738.
33. Wichmann, H., Jockusch, H., Guénet, J.-L., Gallwitz, D., and Kaupmann, K. (1992). The mouse homolog to the ras-related yeast gene YPT1 maps on chromosome 11 close to the wobbler (wr) locus. Mamm. Genome 3: 467-468.