Requirement of mismatch repair genes MSH2 and MSH3 in the RAD1-RAD10 pathway of mitotic recombination in Saccharomyces cerevisiae

Genetics

Volumn 142, Issue 3, 1996, Pages 727-736

  Saparbaev, Murat ^a   Prakash, Louise ^a   Prakash, Satya ^a  

^a UNIVERSITY OF TEXAS MEDICAL BRANCH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA FRAGMENT; ENDONUCLEASE; SINGLE STRANDED DNA;

ARTICLE; BASE MISPAIRING; CONTROLLED STUDY; DELETION MUTANT; DNA INTEGRATION; ENZYME ACTIVITY; EPISTASIS; EXCISION REPAIR; GENE DUPLICATION; GENETIC RECOMBINATION; MITOSIS; NONHUMAN; PRIORITY JOURNAL; SACCHAROMYCES CEREVISIAE;

ADENOSINE TRIPHOSPHATASES; DNA REPAIR; DNA REPAIR ENZYMES; DNA-BINDING PROTEINS; ENDONUCLEASES; FUNGAL PROTEINS; GENE EXPRESSION REGULATION, FUNGAL; MITOSIS; MUTS HOMOLOG 2 PROTEIN; PROTEINS; RECOMBINATION, GENETIC; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; SIGNAL TRANSDUCTION;

EID: 0029896663     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (59)

1. AGUILERA, A., and H. L. KLEIN, 1989 Yeast intrachromosomal recombination: long gene conversion tracts are preferentially associated with reciprocal exchange and require the RAD1 and RAD3 gene products. Genetics 123: 683-694.
2. ALANI, E., L. CAO and N. KLECKNER, 1987 A method for gene disruption that allows repeated vise of URA3 selection in the construction of multiply disrupted genes. Genetics 116: 541-545.
3. ALANI, E., R. A. G. REENAN and R D. KOLODNER, 1994 Interaction between mismatch repair and genetic recombination in Saccharomyces cerevisiae. Genetics 137: 19-39.
4. ALANI, E., N.-W. CHIH, and R. KOLODNER, 1995 The Saccharomyces cerevisiae Msh2 protein specifically binds to duplex oligonucleotides containing mismatched DNA base pairs and insertions. Genes Dev. 9: 234-247.
5. BAILIS, A. M., L. ARTHUR, and R. ROTHSTEIN, 1992 Genome rearrangement in top3 mutants of Saccharomyces cerevisiae requires a functional RAD1 excision repair gene. Mol. Cell. Biol. 12: 4988-4993.
6. BAILLY, V., C. H. SOMMERS, P. SUNG, L. PRAKASH and S. PRAKASH, 1992 Specific complex formation between proteins encoded by the yeast DNA repair and recombination genes RAD1 and RAD10. Proc. Natl. Acad. Sci. USA 89: 8273-8277.
7. BAKER, S. M., C. E. BRONNER, L. ZHANG, A. W. PLUG, M. ROBATZEK et al., 1995 Male mice defective in the DNA mismatch repair gene PMS2 exhibit abnormal chromosome synapsis in meiosis. Cell 82: 309-319.
8. BARDWELL, A. J., L. BARDWELL, A. E. TOMKINSON and E C. FRIEDBERG, 1994 Specific cleavage of model recombination and repair intermediates by the yeast Rad1-Rad10 DNA endonuclease. Science 265: 2082-2085.
9. CARR, A. M., J. SCHMIDT, S. KIRCHHOFF, W. J. MURIEL, K. S. SHELDRICK et al., 1994 The rad16 gene of Schizosaccharomyces pombe: a homolog of the RAD1 gene of Saccharomyces cerevisiae. Mol. Cell. Biol. 14: 2029-2040.
10. CLEAVER, J. E., and K. H. KRAEMER, 1989 Xeroderma pigmentosum, pp. 2949-2971 in The Metabolic Basis of Inherited Disease, edited by C. R. SCRIVER, A. L BEAUDET, W. S. SLY and D. VALLE. McGraw-Hill, New York.
11. DE WIND, N., M. DEKKER, A. BERNS, M RADMAN and H. TE RIELE, 1995 Inactivation of the mouse Msh2 gene results in mismatch repair deficiency, methylation tolerance, hyperrecombination, and predisposition to cancer. Cell 82: 321-330.
12. DETLOFF, P., M. A. WHITE and T. D. PETES, 1992 Analysis of a gene conversion gradient at the HIS4 locus in Saccharomyces cerevisiae. Genetics 132: 113-123.
13. EGEL, R., 1989 Mating-type genes, meiosis, and sporulation, pp. 31-73 in Molecular Biology of the Fission Yeast, edited by A. NASIM, P. YOUNG and B. F. JOHNSON. Academic Press, New York.
14. FEAVER, W. J., J. Q. SVEJSTRUP, L. BARDWELL, A. J. BARDWELL, S. BURATOWSKI et al., 1993 Dual roles of a multiprotein complex from S. cerevisiae transcription and DNA repair Cell 75: 1379-1387.
15. FISHEL, R., A. EWEL, S. LEE, M. K. LESCOE and J. GRIFFITH, 1994 Binding of mismatched microsatellite DNA sequences by the human MSH2 protein. Science 266: 1403-1405.
16. FISHMAN-LOBELL, J., and J. E. HABER, 1992 Removal of nonhomologous DNA ends in double-strand break recombination, the role of the yeast ultraviolet repair gene RAD1. Science 258: 480-484.
17. FRIEDBERG, E. C., G. C. WALKER and W. SIEDE, 1995 DNA Repair and Mutagenesis. ASM Press, Washington, DC.
18. GIETZ, R. D., and A. SUGINO, 1988 New yeast - Escherichia coli shuttle vectors constructed with in-vitro-mutagenized yeast genes lacking six-base-pair restriction sites. Gene 74: 527-534.
19. GUZDER, S N , P. SUNG, L. PRAKASH and S PRAKASH, 1993 Yeast DNA repair gene RAD14 encodes a zinc metalloprotein with affinity for ultraviolet damaged DNA. Proc. Natl. Acad. Sci. USA 90: 5433-5437.
20. GUZDER, S., P. SUNG, V. BAILLY, L. PRAKASH and S. PRAKASH, 1994a RAD25 is a DNA helicase required for DNA repair and RNA polymerase II transcription. Nature 369: 578-581.
21. GUZDER, S. N., H. QIU, C. H. SOMMERS, P. SUNG, L. PRAKASH et al., 1994b DNA repair gene RAD3 of S. cerevisiae is essential for transcription by RNA polymerase II. Nature 367: 91-94.
22. HABER, L. T., and G. C. WALKER, 1991 Altering the conserved nucleotide binding motif in the Salmonella typhimurium MutS mismatch repair protein affects both its ATPase and mismatch binding activities. EMBO J. 10: 2707-2715.
23. HOLLINGSWORTH, N. M., L. PONTE and C. HALSEY, 1995 MSH5, a novel MutS homolog, facilitates meiotic reciprocal recombination between homologs in Saccharomyces cerevisiae but not mismatch repair. Genes Dev. 9: 1728-1739.
24. ITO, H., Y FAUKUDA, K. MURATA and A. KIMURA, 1983 Transformation of intact yeast cells treated with alkali cations. J. Bacteriol. 153: 163-168.
25. IVANOV, E. L., and J. E. HABER, 1995 RAD1 and RAD10, but not other excision repair genes, are required for double-strand break-induced recombination in Saccharomyces cerevisiae. Mol. Cell. Biol. 15: 2245-2251.
26. JACKSON, J. A., and G. R. FINK, 1981 Gene conversion between duplicated genetic elements in yeast. Nature 292: 306-311.
27. KLEIN, H., 1988 Different types of recombination events are controlled by the RAD1 and RAD52 genes of Saccharomyces cerevisiae. Genetics 120: 367-377.
28. KOWALCZYKOWSKI, S. C., D. A. DIXON, A. K. EGGLESTON, S. D. LAUDER and W. M. REHRAUER, 1994 Biochemistry of homologous recombination. Microbiol. Rev. 58: 401-165.
29. LEA, D. E., and C. A. COULSON, 1949 The distribution of the numbers of mutants in bacterial populations. J. Genet. 49: 264-285.
30. LI, L., S. J. ELLEDGE, C. A. PETERSON, E. S. BALES and R. J. LEGERSKI, 1994 Specific association between the human DNA repair proteins XPA and ERCC1. Proc. Natl. Acad. Sci. USA 91: 5012-5016.
31. LIEFSHITZ, B., A. PARKET, R. MAYA, and M KUPIEC, 1995 The role of DNA repair genes in recombination between repeated sequences in yeast. Genetics 140: 1199-1211.
32. MANIATIS, T., E. F. FRITSCH and J. SAMBROOK, 1982 Molecular Cloning: A Laboratory Manual Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
33. NEW, L., K. LIU and G. F. CROUSE, 1993 The yeast gene MSH3 defines a new class of eukaryotic MutS homologues. Mol. Gen. Genet. 239: 97-108.
34. PARK, C.-H., and A. SANCAR, 1994 Formation of a ternary complex by human XPA, ERCC1, and ERCC4(XPF) excision repair proteins. Proc. Natl. Acad. Sci. USA 91: 5017-5021.
35. PETIT, M A., J. DIMPFLI, M. RADMAN and H. ECHOLS, 1991 Control of chromosomal rearrangements in E. coli by the mismatch repair system. Genetics 129: 327-332.
36. PRAKASH, S., P SUNG and L. PRAKASH, 1993 DNA repair genes and proteins of Saccharomyces cerevisiae. Annu. Rev. Genet. 27: 33-70.
37. PROLLA, T. A., D.-M. CHRISTIE and R. M. LISKAY, 1994 Dual requirement in yeast DNA mismatch repair for MLH1 and PMS1, two homologs of the bacterial mutL gene. Mol. Cell. Biol. 14: 407-415.
38. QIU, H., E. PARK, L. PRAKASH and S. PRAKASH, 1993 The Saccharomyces cerevisiae DNA repair gene RAD25 is required for transcription by RNA polymerase II. Genes Dev. 7: 2161-2171
39. RATTRAY, A. J., and L. S. SYMINGTON, 1995 Multiple pathways for homologous recombination in Saccharomyces cerevisiae. Genetics 139: 45-56.
40. RAYSSIGUIER, C , D. S. THALER and M. RADMAN, 1989 The barrier to recombination between Escherichia coli A and Salmonella typhimurium is disrupted in mismatch-repair mutants. Nature 342: 396-401.
41. REENAN, R. A., and R. D. KOLODNER, 1992 Characterization of insertion mutations in the Saccharomyces cerevisiae MSH1 and MSH2 genes: evidence for separate mitochondrial and nuclear functions. Genetics 132: 975-985.
42. REYNOLDS, P., L. PRAKASH, D. DUMAIS and S. PRAKASH, 1985 Nucleotide sequence of the RAD10 gene of Saccharomyces cerevisiae. EMBO J. 4: 3549-3552.
43. REYNOLDS, P., L. PRAKASH and S. PRAKASH, 1987 Nucleotide sequence and functional analysis of the RAD1 gene of Saccharomyces cerevisiae. Mol. Cell. Biol. 7: 1012-1020.
44. RODEL, C , S. KIRCHHOFF and H. SCHMIDT, 1992 The protein sequence and some intron positions are conserved between the switching gene swi10 of Schizosaccharomyces pombe and the human excision repair gene ERCC1 Nucleic Acids Res 20: 6347-6353.
45. ROSS-MACDONALD, P., and G. S. ROEDER, 1994 Mutation of a meiosis-specific MutS homolog decreases crossing over but not mismatch correction. Cell 79: 1069-1080.
46. ROTHSTFIN, R., 1991 Targeting, disruption, replacement, and allele rescue, integrative DNA transformation in yeast. Methods Enzymol. 194: 281-301.
47. SCHIESTL, R. H., and R. D. GIETZ, 1989 High efficiency transformation of intact yeast cells using single stranded nucleic acids as a carrier. Curr. Genet. 16: 339-346.
48. SCHIESTL, R. H., and S. PRAKASH, 1988 RAD1, an excision repair gene of Saccharomyces cerevisiae, is also involved in recombination. Mol. Cell. Biol. 8: 3619-3626.
49. SCHIESTL, R H., and S. PRAKASH, 1990 RAD10, an excision repair gene of Saccharomyces cerevisiae, is involved in the RAD1 pathway of mitotic recombination. Mol. Cell. Biol. 10: 2485-2491.
50. SEKELSKY, J. J., K. S. MCKIM, G. M. CHIN and R. S. HAWLEY, 1995 The Drosophila meiotic recombination gene mei-9 encodes a homologue ot the yeast excision repair protein Rad1 Genetics 141: 619-627.
51. SELVA, E. M., L NEW, G. F. GROUSE and R. S. LAHUE, 1995 Mismatch correction acts as a barrier to homeologous recombination in Saccharomyces cerevisiae. Genetics 139: 1175-1188.
52. SHERMAN, F., G. R. FINK and J B. HICKS, 1986 Methods in Yeast Genetics: A Laboratory Manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
53. STRAND, M., T. A. PROLIA, R. M. LISKAY and T. D. PETES, 1993 Destabilization of tracts of simple repetitive DNA in yeast by mutations affecting DNA mismatch repair. Nature 365: 274-276.
54. SUNG, P., P. REYNOLDS, L. PRAKASH and S. PRAKASH, 1993 Purification and characterization of the Saccharomyces cerevisiae RAD1/ RAD10 endonuclease. J. Biol. Chem. 268: 26391-26399.
55. SVEJSTRUP, I. Q., W. J. FEAVER, J. LAPOINTE and R. D. KORNBERG, 1994 RNA polymerase transcription factor IIH holoenzyme from yeast. J. Biol. Chem. 269: 28044-28048.
56. THOMAS, B. J., and R. ROTHSTEIN, 1989 The genetic control of direct-repeat recombination in Saccharomyces cerevisiae: the effect of rad52 and rad1 on mitotic recombination at GAL10, a transcriptionally regulated gene. Genetics 123: 725-738.
57. TOMKINSON, A. E., A. J. BARDWELL, L. BARDWELL, N. J. TAPPE and E. C. FRIEDBERG, 1993 Yeast DNA repair and recombination proteins Rad1 and Rad10 constitute a single-stranded-DNA endonuclease. Nature 362: 860-862.
58. WORTH, L. J., S. CLARK, M. RADMAN and P. MODRICH, 1994 Mismatch repair proteins MutS and MutL inhibit RecA-catalyzed strand transfer between diverged DNAs. Proc. Natl. Acad. Sci. USA 91: 3238-3241.
59. ZEHFUS, B. R., A. D. MCWILLIAMS, Y. H. LIN, M. F. HOEKSTRA and R. L. KEIL, 1990 Genetic control of RNA polymerase I stimulated recombination in yeast. Genetics 126: 41-52.