Waiting for a compensatory mutation : Phase zero of the shifting-balance process

Genetical Research

Volumn 67, Issue 3, 1996, Pages 271-283

  Phillips, Patrick C ^a  

^a UNIVERSITY OF TEXAS AT ARLINGTON   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; EVOLUTION; GENE FREQUENCY; GENE MUTATION; GENETIC LINKAGE; GENETIC MODEL; NATURAL SELECTION; POPULATION GENETICS;

ALLELES; GENE EXPRESSION REGULATION; GENE FREQUENCY; LINKAGE (GENETICS); MARKOV CHAINS; MODELS, GENETIC; MUTATION; SELECTION (GENETICS); TIME FACTORS;

EID: 0029896552     PISSN: 00166723     EISSN: None     Source Type: Journal    
DOI: 10.1017/s0016672300033759     Document Type: Article

References (46)

1. Barton, N. H. (1992). On the spread of a new gene combination in the third phase of Wright's shifting-balance. Evolution 46, 551 557.
2. Barton, N. H. & Rouhani, S. (1993). Adaptation and the 'shifting-balance'. Genetical Research, Cambridge 125, 57-74.
3. Brimacombe, R. (1984). Conservation of structure in ribosomal RNA. Tends in Biochemical Sciences 9, 273-277.
4. Carson, H. L. & Templeton, A. R. (1984). Genetic revolutions in relation to speciation phenomena: the founding of new populations. Annual Review of Ecology and Systematics 15, 97-131.
5. Charlesworth, B. & Smith, D. B. (1982). A computer model of speciation by founder effects. Genetical Research, Cambridge 39, 227-236.
6. Crow, J. F. & Kimura, M. (1956). Some genetic problems in natural populations. In Proceedings of the Third Berkeley Symposium on Mathematical Statistics and Probability, vol. 4, pp. 1-22. Berkeley: University of California Press.
7. Crow, J. F. & Kimura, M. (1970). An Introduction to Population Genetics Theory. Minneapolis, Minnesota: Burgess.
8. Crow, J. F., Engels, W. R. & Denniston, C. (1990). Phase three of Wright's shifting-balance theory. Evolution 44, 233-247.
9. Fisher, R. A. (1930). The Genetical Theory of Natural Selection. Oxford: Clarendon Press.
10. Fitch, W. M. & Markowitz, E. (1970). An improved method for determining codon variability in a gene and its application to the rate of fixation of mutations in evolution. Biochemical Genetics 4, 579-593.
11. Fu. Y.-X. & Arnold, J. (1992), Dynamics of cytonuclear disequilibria in finite populations and comparison with a two-locus nuclear system. Theoretical Population Biology 41, 1-25.
12. Gillespie, J. H. (1984). Molecular evolution over the mutational landscape. Evolution 38; 1116-1129.
13. Haldane, J. B. S. (1931). A mathematical theory of natural selection. VI. Isolation. Transactions of the Cambridge Philosophical Society 26, 220-230.
14. Karlin, S. & McGregor, J. (1968). Rates and probabilities of fixation for two locus random mating finite populations without selection. Genetics 58, 141 159.
15. Kimura, M. (1955). Stochastic processes and distribution of gene frequencies under natural selection. Cold Spring Harbor Symposium on Quantitative Biology 20, 33-53.
16. Kimura, M. (1964). Diffusion models in population genetics. Journal of Applied Probability 1, 177-232.
17. Kimura, M. (1980). Average time until fixation of a mutant allele in a finite population under continued mutation pressure: studies by analytical, numerical, and pseudosampling methods. Proceedings of the National Academy of Sciences, USA 77, 522-526.
18. Kimura, M. (1985a). Diffusion models in population genetics with special reference to fixation time of molecular mutants under mutational pressure. In Population Genetics and Molecular Evolution (ed. T. Ohta and K. Aoki), pp. 19-39. Tokyo/Berlin: Japan Scientific Societies Press/Springer.
19. Kimura, M. (1985b). The role of compensatory neutral mutation in molecular evolution. Journal of Genetics 64, 7-19.
20. Kimura, M. (1990). Some models of neutral evolution, compensatory evolution, and the shifting balance process. Theoretical Population Biology 37, 150-158.
21. Kimura, M. & Ohta, T. (1971). Theoretical Aspects of Population Genetics. Princeton, N.J.: Princeton University Press.
22. Kimura, M. & Takahata, N. (1983). Selective constraint in protein polymorphism: study of the effectively neutral mutation model by using an improved pseudosampling method. Proceedings of the National Academy of Sciences, USA 80, 1048-1052.
23. Kondrashov, A. S. (1992). The third phase of Wright's shifting-balance: a simple analysis of the extreme case. Evolution 46, 1972-1975.
24. Lande, R. (1985). The fixation of chromosomal rearrangements in a subdivided population with local extinction and recolonisation. Heredity 54, 323-332.
25. Lande, R. (1986). The dynamics of peak shifts and the pattern of morphological evolution. Paleobiology 12, 343-354.
26. Lande, R. (1988). Genetics and demography in biological conservation. Science 241, 1455-1460
27. Littler, R. A. (1973). Linkage disequilibrium in finite populations. Theoretical Population Biology 4, 259-275.
28. Michalakis, Y. & Slatkin, M. (1996). Interaction of selection and recombination in the fixation of negative-epistatic genes. Genetical Research, Cambridge (in press).
29. Moore, F. B.-G. & Tonsor, S. J. (1994). A simulation of Wright's shifting-balancing process: migration and the three phases. Evolution 48, 69-80.
30. Newman, C. M., Cohen, J. E. & Kipnis, C. (1985). Neo-Darwinian evolution implies punctuated equilibria. Nature 315, 400-402.
31. Ohta, T. (1988). Evolution by gene duplication and compensatory advantageous mutations. Genetics 120, 841-847.
32. Ohta, T. & Kimura, M. (1969). Linage disequilibrium due to random genetic drift. Genetical Research, Cambridge 13, 47-55.
33. Orr, H. A. (1995). The population genetics of speciation: the evolution of hybrid incompatibilities. Genetics 139, 1805-1813.
34. Phillips, P. C. (1993). Peaks shifts and polymorphism during phase three of Wright's shifting-balance process. Evolution 47, 1733-1743.
35. Provine, W. B. (1989). Founder effects and genetic revolutions in microevolution and speciation: a historical perspective. In Genetics, Speciation, and the Founder Principle (ed. L. V. Giddings, K. Y. Kaneshiro and W. W. Anderson), pp. 43-76. New York: Oxford University Press.
36. Rouhani, S. & Barton, N. H. (1987). Speciation and the 'shifting balance' in a continuous population. Theoretical Population Biology 31, 465-492.
37. Rouhani, S. & Barton, N. H. (1993). Group selection and the 'shifting balance'. Genetical Research, Cambridge 61, 127-135.
38. Rutledge, R. A. (1970). The survival of epistatic gene complexes in subdivided populations. Unpublished PhD dissertation, Columbia University.
39. Stephan, W. & Kirby, D. A. (1993). RNA folding in Drosophila shows a distance effect of compensatory fitness interactions. Genetics 135, 97-103.
40. Takahata, N. (1982). Sexual recombination under the joint effects of mutation, selection, and random sampling drift. Theoretical Population Biology 22, 258-277.
41. Tjian, R. (1995), Molecular machines that control genes. Scientific American 272, 54-61.
42. Tsukihara, T., Kobayashi, M., Nakamura, M., Katsube, Y., Fukuyama, K., Hase, T., Wada, K. & Matsubara, H. (1982). Structure-function relationship of [2Fe-2S] ferredoxins and design of a model molecule. Biosystems 15, 243-257.
43. Whitlock, M. C., Phillips, P. C., Moore, F. B.-G. & Tonsor, S. J. (1995). Multiple fitness peaks and epistasis. Annual Review of Ecology and Systematics 26, 601-629.
44. Wright, S. (1931). Evolution in Mendelian populations. Genetics 16, 97-159.
45. Wright, S. (1932). The roles of mutation, inbreeding, crossbreeding and selection in evolution. In Proceedings of the 6th International Congress on Genetics, vol. 1, pp. 356-366.
46. Wright, S. (1977). Evolution and the Genetics of Populations, vol. 3, Experimental Results and Evolutionary Deductions, Chicago: University of Chicago Press.