-
1
-
-
0025633325
-
Structure and variability of recently inserted Alu family members
-
BATZER, M. A., G. E. KILROY, P. E. RICHARD, T. H. SHAIKH, T. D. DESSELLE et al., 1990 Structure and variability of recently inserted Alu family members. Nucleic Acids Res. 18: 6793-6798
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 6793-6798
-
-
Batzer, M.A.1
Kilroy, G.E.2
Richard, P.E.3
Shaikh, T.H.4
Desselle, T.D.5
-
2
-
-
0342596934
-
Sources and evolution of human Alu repeated sequences
-
BRITTEN, R. J., W. F. BARON, D. B. STOUT and E. H. DAVIDSON, 1988 Sources and evolution of human Alu repeated sequences. Proc. Natl. Acad. Sci. USA 85: 4770-4774
-
(1988)
Proc. Natl. Acad. Sci. USA
, vol.85
, pp. 4770-4774
-
-
Britten, R.J.1
Baron, W.F.2
Stout, D.B.3
Davidson, E.H.4
-
3
-
-
0028172520
-
Phylogenetic relationships among eutherian orders estimated from inferred sequences of mitochondrial proteins: Instability of a tree based on a single gene
-
CAO, Y., J. ADACHI, A. JANKE, S. PÄÄBO and M. HASEGAWA, 1994a Phylogenetic relationships among eutherian orders estimated from inferred sequences of mitochondrial proteins: instability of a tree based on a single gene. J. Mol. Evol. 39: 519-527.
-
(1994)
J. Mol. Evol.
, vol.39
, pp. 519-527
-
-
Cao, Y.1
Adachi, J.2
Janke, A.3
Pääbo, S.4
Hasegawa, M.5
-
4
-
-
0028362463
-
Phylogenetic place of guinea pig: No support of the rodent-polyphyly hypothesis from maximum-likelihood analyses of multiple protein sequences
-
GAO, Y., J. ADACHI, T. YANO and M. HASEGAWA, 1994b Phylogenetic place of guinea pig: no support of the rodent-polyphyly hypothesis from maximum-likelihood analyses of multiple protein sequences. Mol. Biol. Evol. 11: 593-604.
-
(1994)
Mol. Biol. Evol.
, vol.11
, pp. 593-604
-
-
Gao, Y.1
Adachi, J.2
Yano, T.3
Hasegawa, M.4
-
5
-
-
0022388991
-
Repeat sequence families derived from mammalian tRNA genes
-
DANIELS, G. R., and P. L. DEININGER, 1985 Repeat sequence families derived from mammalian tRNA genes. Nature 317: 819-822.
-
(1985)
Nature
, vol.317
, pp. 819-822
-
-
Daniels, G.R.1
Deininger, P.L.2
-
6
-
-
0023811705
-
Recently amplified Alu family members share a common parental Alu sequence
-
DEININGER, P. L., and V. K. SLAGEL. 1988 Recently amplified Alu family members share a common parental Alu sequence. Mol. Cell. Biol. 8: 4566-4569.
-
(1988)
Mol. Cell. Biol.
, vol.8
, pp. 4566-4569
-
-
Deininger, P.L.1
Slagel, V.K.2
-
7
-
-
0001993061
-
Evolutionary and taxonomic significance of protein variation in the brown trout (Salmo trutta L) and other Salmonid fishes
-
edited by G. S. OXFORD and D. ROLLINSON. Academic Press, London
-
FERGUSON, A., and C. C. FLEMING, 1983 Evolutionary and taxonomic significance of protein variation in the brown trout (Salmo trutta L) and other Salmonid fishes, pp. 85-99 in Protein Polymorphism: Adaptive and Taxonomic Significance, edited by G. S. OXFORD and D. ROLLINSON. Academic Press, London.
-
(1983)
Protein Polymorphism: Adaptive and Taxonomic Significance
, pp. 85-99
-
-
Ferguson, A.1
Fleming, C.C.2
-
8
-
-
0000490962
-
The evolution of migratory behaviour among juvenile salmon of the genus Oncorhynchus
-
HOAR, W. S., 1958 The evolution of migratory behaviour among juvenile salmon of the genus Oncorhynchus. J. Fish. Res. Board Can. 15: 391-428.
-
(1958)
J. Fish. Res. Board Can.
, vol.15
, pp. 391-428
-
-
Hoar, W.S.1
-
9
-
-
0027261561
-
An Alu element, retroposition in two families with Huntington disease defines a new active Alu subfamily
-
HUTCHINSON, G. B., S E. ANDREW, H. MCDONALD, Y. P. GOLDBERG, R. GRAHAM et al., 1993 An Alu element, retroposition in two families with Huntington disease defines a new active Alu subfamily. Nucleic Acids Res. 21: 3379-3383.
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 3379-3383
-
-
Hutchinson, G.B.1
Andrew, S.E.2
Mcdonald, H.3
Goldberg, Y.P.4
Graham, R.5
-
10
-
-
0025736539
-
Reconstruction and analysis of human Alu genes
-
JURKA, J., and A. MILOSAVLJEVIC, 1991 Reconstruction and analysis of human Alu genes. J. Mol. Evol. 32: 105-121.
-
(1991)
J. Mol. Evol.
, vol.32
, pp. 105-121
-
-
Jurka, J.1
Milosavljevic, A.2
-
11
-
-
0342298816
-
A fundamental division in the Alu family of repeated sequences
-
JURKA, J., and T. SMITH, 1988 A fundamental division in the Alu family of repeated sequences. Proc. Natl. Acad. Sci. USA 85: 4775-4778.
-
(1988)
Proc. Natl. Acad. Sci. USA
, vol.85
, pp. 4775-4778
-
-
Jurka, J.1
Smith, T.2
-
12
-
-
0026088772
-
Shaping and reshaping of salmonid genomes by amplification of tRNA-derived retroposons during evolution
-
KIDO, Y., M. AONO, T. YAMAKI, K. MATSUMOTO, S. MURATA et al., 1991 Shaping and reshaping of salmonid genomes by amplification of tRNA-derived retroposons during evolution. Proc. Natl. Acad. Sci. USA 88: 2326-2330.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 2326-2330
-
-
Kido, Y.1
Aono, M.2
Yamaki, T.3
Matsumoto, K.4
Murata, S.5
-
13
-
-
0028000997
-
Amplification of distinct subfamilies of short interspersed elements during evolution of the Salmonidae
-
KIDO, Y., M. HIMBERG, N. TAKASAKI and N. OKADA, 1994 Amplification of distinct subfamilies of short interspersed elements during evolution of the Salmonidae. J. Mol. Biol. 241: 633-644.
-
(1994)
J. Mol. Biol.
, vol.241
, pp. 633-644
-
-
Kido, Y.1
Himberg, M.2
Takasaki, N.3
Okada, N.4
-
14
-
-
0029591608
-
Evolution of the source sequences of HpaI short interspersed elements
-
in press
-
KIDO, Y., M. SAITOH, S. MURATA and N. OKADA, 1996 Evolution of the source sequences of HpaI short interspersed elements. J. Mol. Evol. (in press).
-
(1996)
J. Mol. Evol.
-
-
Kido, Y.1
Saitoh, M.2
Murata, S.3
Okada, N.4
-
16
-
-
0024307824
-
Evaluation of maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea
-
KISHINO, H., and M. HASEGAWA, 1989 Evaluation of maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. J. Mol. Evol. 29: 170-179.
-
(1989)
J. Mol. Evol.
, vol.29
, pp. 170-179
-
-
Kishino, H.1
Hasegawa, M.2
-
17
-
-
0026623431
-
Higher rate of evolution of X chromosome α-repeat DNA in human than in the great apes
-
LAURSEN, H. B., A. L. JØRGENSEN, C. JONES and A. L. BAK, 1992 Higher rate of evolution of X chromosome α-repeat DNA in human than in the great apes. EMBO J. 11: 2367-2372.
-
(1992)
EMBO J.
, vol.11
, pp. 2367-2372
-
-
Laursen, H.B.1
Jørgensen, A.L.2
Jones, C.3
Bak, A.L.4
-
18
-
-
0022432238
-
Analysis of repetitive sequence elements containing tRNA-like sequences
-
LAWRENCE, C. B., D. P. MCDONNELL and W. J. RAMSEY, 1985 Analysis of repetitive sequence elements containing tRNA-like sequences. Nucleic Acids Res. 13: 4239-4252.
-
(1985)
Nucleic Acids Res.
, vol.13
, pp. 4239-4252
-
-
Lawrence, C.B.1
Mcdonnell, D.P.2
Ramsey, W.J.3
-
19
-
-
0023263979
-
The molecular clock runs more slowly in man than in apes and monkeys
-
LI, W.-H., and M. TANIMURA, 1987 The molecular clock runs more slowly in man than in apes and monkeys. Nature 326: 93-96.
-
(1987)
Nature
, vol.326
, pp. 93-96
-
-
Li, W.-H.1
Tanimura, M.2
-
20
-
-
0025162768
-
Recently transposed Alu repeats result from multiple source genes
-
MATERA, A. G., U. HELLMANN, M. F. HINTZ and C. W. SCHMID, 1990 Recently transposed Alu repeats result from multiple source genes Nucleic Acids Res. 18: 6019-6023.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 6019-6023
-
-
Matera, A.G.1
Hellmann, U.2
Hintz, M.F.3
Schmid, C.W.4
-
21
-
-
0022472658
-
1 may be a progenitor of the highly repetitive and transcribable sequences present in the salmon genome
-
1 may be a progenitor of the highly repetitive and transcribable sequences present in the salmon genome. Proc. Natl. Acad. Sci. USA 83: 3156-3160.
-
(1986)
Proc. Natl. Acad. Sci. USA
, vol.83
, pp. 3156-3160
-
-
Matsumoto, K.1
Murakami, K.2
Okada, N.3
-
22
-
-
0026645642
-
Characterization of a plant SINE, p-SINE1, in rice genome
-
MOCHIZUKI, K., M. UMEDA, H. OHTSUBO and E. OHTSUBO, 1992 Characterization of a plant SINE, p-SINE1, in rice genome. Jpn. J. Genet. 67: 155-166.
-
(1992)
Jpn. J. Genet.
, vol.67
, pp. 155-166
-
-
Mochizuki, K.1
Umeda, M.2
Ohtsubo, H.3
Ohtsubo, E.4
-
23
-
-
0027205382
-
Determination of the phylogenetic relationships among Pacific salmonids by using short interspersed elements (SINEs) as temporal landmarks of evolution
-
MURATA, S., N. TAKASAKI, M. SAITOH and N. OKADA, 1993 Determination of the phylogenetic relationships among Pacific salmonids by using short interspersed elements (SINEs) as temporal landmarks of evolution. Proc. Natl. Acad. Sci. USA 90: 6995-6999.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 6995-6999
-
-
Murata, S.1
Takasaki, N.2
Saitoh, M.3
Okada, N.4
-
24
-
-
0027289469
-
Several short interspersed repetitive elements (SINEs) in distinct species may have originated from a common ancestral retrovirus: Characterization of a squid SINE and a possible mechanism for generation of tRNA-derived retroposons
-
OHSHIMA, K., R. KOISHI, M. MATSUO and N. OKADA, 1993 Several short interspersed repetitive elements (SINEs) in distinct species may have originated from a common ancestral retrovirus: characterization of a squid SINE and a possible mechanism for generation of tRNA-derived retroposons. Proc. Natl. Acad. Sci. USA 90: 6260-6264
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 6260-6264
-
-
Ohshima, K.1
Koishi, R.2
Matsuo, M.3
Okada, N.4
-
26
-
-
0001414578
-
SINEs: Short interspersed repeated elements of the eukaryotic genome
-
OKADA, N., 1991b SINEs: short interspersed repeated elements of the eukaryotic genome. Trends. Ecol. Evol. 6: 358-361.
-
(1991)
Trends. Ecol. Evol.
, vol.6
, pp. 358-361
-
-
Okada, N.1
-
27
-
-
0002722857
-
Evolution of tRNA-derived SINEs
-
edited by R MARAIA, R. G Landes Company, Austin, TX
-
OKADA, N., and K. OHSHIMA., 1995 Evolution of tRNA-derived SINEs, pp. 61-79 in The Impart of Short Interspersed Elements (SINEs) on the Host Genome, edited by R MARAIA, R. G Landes Company, Austin, TX.
-
(1995)
The Impart of Short Interspersed Elements (SINEs) on the Host Genome
, pp. 61-79
-
-
Okada, N.1
Ohshima, K.2
-
28
-
-
0005501536
-
Many highly repetitive and transcribable sequences are derived from tRNA genes
-
Ser. B
-
OKADA, N., H ENDOH, K. SAKAMOTO and K. MATSUMOTO, 1985 Many highly repetitive and transcribable sequences are derived from tRNA genes. Proc. Jpn Acad 61 Ser. B: 363-367
-
(1985)
Proc. Jpn Acad
, vol.61
, pp. 363-367
-
-
Okada, N.1
Endoh, H.2
Sakamoto, K.3
Matsumoto, K.4
-
29
-
-
0006623498
-
Genetic divergence and its zoogeographic implications in closely related species Salmo gairdneri and Salmo mykiss
-
OKAZAKI, T., 1984 Genetic divergence and its zoogeographic implications in closely related species Salmo gairdneri and Salmo mykiss. Jpn. J. Ichthyol. 31: 297-311.
-
(1984)
Jpn. J. Ichthyol.
, vol.31
, pp. 297-311
-
-
Okazaki, T.1
-
30
-
-
0000909802
-
The pitfalls of molecular phylogeny based on four species, as illustrated by the Cetacea/Artiodactyla relationships
-
PHILIPPE, H., and E. DOUZERY, 1994 The pitfalls of molecular phylogeny based on four species, as illustrated by the Cetacea/Artiodactyla relationships. J. Mammal. Evol. 2: 133-152.
-
(1994)
J. Mammal. Evol.
, vol.2
, pp. 133-152
-
-
Philippe, H.1
Douzery, E.2
-
31
-
-
34250370010
-
Nuclear DNA and salmonid phylogenetics
-
PHILLIPS, R. B., and K. A. PLEYTE, 1991 Nuclear DNA and salmonid phylogenetics. J. Fish Biol. 39 Suppl. A: 259-275.
-
(1991)
J. Fish Biol.
, vol.39
, Issue.SUPPL. A
, pp. 259-275
-
-
Phillips, R.B.1
Pleyte, K.A.2
-
32
-
-
0001048720
-
Salmonid phylogeny inferred from ribosomal DNA restriction maps
-
PHILLIPS, R. B., K. A. PLEYTE and M. R BROWN, 1992 Salmonid phylogeny inferred from ribosomal DNA restriction maps. Can. J. Fish. Aquat. Sci. 49: 2345-2353.
-
(1992)
Can. J. Fish. Aquat. Sci.
, vol.49
, pp. 2345-2353
-
-
Phillips, R.B.1
Pleyte, K.A.2
Brown, M.R.3
-
33
-
-
0023916853
-
The Alu family developed through successive waves of fixation closely connected with primate lineage history
-
QUENTIN, Y., 1988 The Alu family developed through successive waves of fixation closely connected with primate lineage history. J. Mol. Evol. 27: 194-202.
-
(1988)
J. Mol. Evol.
, vol.27
, pp. 194-202
-
-
Quentin, Y.1
-
34
-
-
0021895321
-
The origin and evolution of retroposons
-
ROGERS, J. H., 1985 The origin and evolution of retroposons. Int. Rev. Cytol. 93: 187-279.
-
(1985)
Int. Rev. Cytol.
, vol.93
, pp. 187-279
-
-
Rogers, J.H.1
-
35
-
-
0024379002
-
Newly arisen DNA repeats in primate phylogeny
-
RYAN, S. C., and A. DUGAICZYK, 1989 Newly arisen DNA repeats in primate phylogeny. Proc. Natl. Acad. Sci. USA 86: 9360-9364.
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 9360-9364
-
-
Ryan, S.C.1
Dugaiczyk, A.2
-
36
-
-
0022315823
-
Rodent type 2 Alu family, rat identifier sequence, rabbit C family, and bovine or goat 73-bp repeat may have evolved from tRNA genes
-
SAKAMOTO, K., and N. OKADA, 1985 Rodent type 2 Alu family, rat identifier sequence, rabbit C family, and bovine or goat 73-bp repeat may have evolved from tRNA genes. J. Mol. Evol. 22: 134-140.
-
(1985)
J. Mol. Evol.
, vol.22
, pp. 134-140
-
-
Sakamoto, K.1
Okada, N.2
-
37
-
-
0027026168
-
Transcriptional regulation and transpositional selection of active SINE sequence
-
SCHMID, C., and R. MARAIA, 1992 Transcriptional regulation and transpositional selection of active SINE sequence. Curr. Opin. Genet. Dev. 2: 874-882.
-
(1992)
Curr. Opin. Genet. Dev.
, vol.2
, pp. 874-882
-
-
Schmid, C.1
Maraia, R.2
-
38
-
-
0026911156
-
Evolution of the salmonid mitochondrial control region
-
SHEDLOCK, A. M., J. D. PARKER, D. A. CRISPIN, T. W. PIETSCH and G. C. BURMER, 1992 Evolution of the salmonid mitochondrial control region. Mol. Phylogenet. Evol. 1: 179-192.
-
(1992)
Mol. Phylogenet. Evol.
, vol.1
, pp. 179-192
-
-
Shedlock, A.M.1
Parker, J.D.2
Crispin, D.A.3
Pietsch, T.W.4
Burmer, G.C.5
-
40
-
-
0020044638
-
SINEs and LINEs: Highly repeated short and long interspersed sequences in mammalian genomes
-
SINGER, M. R, 1982 SINEs and LINEs: highly repeated short and long interspersed sequences in mammalian genomes. Cell 28: 433-434.
-
(1982)
Cell
, vol.28
, pp. 433-434
-
-
Singer, M.R.1
-
41
-
-
0023139397
-
Clustering and subfamily relationships of the Alu family in the human genome
-
SLAGEL, V., E. FLEMINGTON, V. TRAINA-DORGE, H. BRADSHAW and P. DEININGER, 1987 Clustering and subfamily relationships of the Alu family in the human genome. Mol. Biol. Evol. 4: 19-29.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 19-29
-
-
Slagel, V.1
Flemington, E.2
Traina-Dorge, V.3
Bradshaw, H.4
Deininger, P.5
-
42
-
-
0002357683
-
The classification and scientific names of rainbow and cutthroat trouts
-
SMITH, G. R., and R. F. STEARLEY, 1989 The classification and scientific names of rainbow and cutthroat trouts. Fisheries 14: 4-10.
-
(1989)
Fisheries
, vol.14
, pp. 4-10
-
-
Smith, G.R.1
Stearley, R.F.2
-
43
-
-
84953602718
-
Phylogeny of the Pacific trouts and salmons (Oncorhynchus) and genera of the family Salmonidae
-
STEARLEY, R. F., and G. R. SMITH, 1993 Phylogeny of the Pacific trouts and salmons (Oncorhynchus) and genera of the family Salmonidae. Trans. Amer. Fish. Soc. 122: 1-33.
-
(1993)
Trans. Amer. Fish. Soc.
, vol.122
, pp. 1-33
-
-
Stearley, R.F.1
Smith, G.R.2
-
44
-
-
0027534916
-
A population genetic study of the evolution of SINEs. I. Polymorphism with regard to the presence or absence of an element
-
TACHIDA, H., and M. IIZUKA, 1993 A population genetic study of the evolution of SINEs. I. Polymorphism with regard to the presence or absence of an element. Genetics 133: 1023-1030.
-
(1993)
Genetics
, vol.133
, pp. 1023-1030
-
-
Tachida, H.1
Iizuka, M.2
-
45
-
-
0028027562
-
Species-specific amplification of tRNA-derived short interspersed repetitive elements (SINEs) by retroposition: A process of parasitization of entire genomes during the evolution of salmonids
-
TAKASAKI, N., S. MURATA, M. SAITOH, T. KOBAYASHI, L. PARK et al., 1994 Species-specific amplification of tRNA-derived short interspersed repetitive elements (SINEs) by retroposition: a process of parasitization of entire genomes during the evolution of salmonids. Proc. Natl. Acad. Sci. USA 91: 10153-10157.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 10153-10157
-
-
Takasaki, N.1
Murata, S.2
Saitoh, M.3
Kobayashi, T.4
Park, L.5
-
46
-
-
0000078242
-
Mitochondrial DNA analysis of Pacific salmonid evolution
-
THOMAS, W. K., R. E. WITHLER and A. T. BECKENFBACH, 1986 Mitochondrial DNA analysis of Pacific salmonid evolution. Can. J. Zool. 64: 1058-1064.
-
(1986)
Can. J. Zool.
, vol.64
, pp. 1058-1064
-
-
Thomas, W.K.1
Withler, R.E.2
Beckenfbach, A.T.3
-
47
-
-
84959820724
-
Genetic variability and relationships in Pacific salmon and related trout based on protein variations
-
UTTER, F. M., F. W. ALLENDORF and H. O. HODGINS, 1973 Genetic variability and relationships in Pacific salmon and related trout based on protein variations. Syst. Zool. 22: 257-270.
-
(1973)
Syst. Zool.
, vol.22
, pp. 257-270
-
-
Utter, F.M.1
Allendorf, F.W.2
Hodgins, H.O.3
-
48
-
-
0022555861
-
Nonviral retroposons: Genes, pseudogenes, and transposable elements generated by the reverse flow of genetic information
-
WEINER, A. M., P. L. DEININGER and A. EFSTRATIADIS, 1986 Nonviral retroposons: genes, pseudogenes, and transposable elements generated by the reverse flow of genetic information. Annu. Rev. Biochem. 55: 631-661.
-
(1986)
Annu. Rev. Biochem.
, vol.55
, pp. 631-661
-
-
Weiner, A.M.1
Deininger, P.L.2
Efstratiadis, A.3
-
49
-
-
0023478607
-
Existence of at least three distinct Alu subfamilies
-
WILLARD, C., H. T. NGUYEN and C. W. SCHMID, 1987 Existence of at least three distinct Alu subfamilies. J. Mol. Evol. 26: 180-186.
-
(1987)
J. Mol. Evol.
, vol.26
, pp. 180-186
-
-
Willard, C.1
Nguyen, H.T.2
Schmid, C.W.3
-
51
-
-
0027260466
-
Molecular characterization of a short interspersed repetitive element from tobacco that exhibits sequence homology to specific tRNAs
-
YOSHIOKA, Y., S. MATSUMOTO, S. KOJIMA, K. OHSHIMA, N. OKADA et al., 1993 Molecular characterization of a short interspersed repetitive element from tobacco that exhibits sequence homology to specific tRNAs. Proc. Natl. Acad. Sci. USA 90: 6562-6566.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 6562-6566
-
-
Yoshioka, Y.1
Matsumoto, S.2
Kojima, S.3
Ohshima, K.4
Okada, N.5
-
52
-
-
0001895697
-
Evolutionary divergence and convergence in proteins
-
edited by V. BRYSON and H. J. VOGEL. Academic Press, New York
-
ZUCKERKANDL, E., and L. PAULING, 1965 Evolutionary divergence and convergence in proteins, pp. 97-166 in Evolving Genes and Proteins, edited by V. BRYSON and H. J. VOGEL. Academic Press, New York.
-
(1965)
Evolving Genes and Proteins
, pp. 97-166
-
-
Zuckerkandl, E.1
Pauling, L.2
|