Extremely sensitive, background-free gene detection using binary probes and Qβ replicase

Proceedings of the National Academy of Sciences of the United States of America

Volumn 93, Issue 11, 1996, Pages 5395-5400

  Tyagi, Sanjay ^a   Landegreni, Ulf ^b   Tazi, Mounssef ^a   Lizardi, Paul M ^c   Kramer, Fred Russell ^a  

^a PUBLIC HEALTH RESEARCH INSTITUTE   (United States)

^b UPPSALA UNIVERSITY   (Sweden)

^c INSTITUTO DE BIOTECNOLOGÍA   (Mexico)

Author keywords

diagnostic clinical assays; exponential amplification of reporter RNAs; isolation of probe target hybrids; T4 DNA ligase; target dependent signal generation

Indexed keywords

POLYDEOXYRIBONUCLEOTIDE SYNTHASE; RNA DIRECTED RNA POLYMERASE;

ARTICLE; CELL DIVISION; ENZYME ASSAY; GENE AMPLIFICATION; GENE TARGETING; GENETIC ANALYSIS; LYMPHOCYTE; NONHUMAN; OLIGONUCLEOTIDE PROBE; POLYMERASE CHAIN REACTION; POLYMERIZATION; PRIORITY JOURNAL; TARGET CELL;

BASE SEQUENCE; CELL LINE; DNA-DIRECTED RNA POLYMERASES; GENES, VIRAL; GENETIC TECHNIQUES; HIV-1; HUMANS; LYMPHOCYTES; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; Q BETA REPLICASE; RNA PROBES; RNA, MESSENGER; RNA, VIRAL; SENSITIVITY AND SPECIFICITY; TEMPLATES, GENETIC; TRANSCRIPTION, GENETIC;

EID: 0029894980     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.93.11.5395     Document Type: Article

References (39)

1. Saiki, R. K., Scharf, S., Faloona, F., Mullis, K. B., Horn, G. T., Erlich, H. A. & Arnheim, N. (1985) Science 230, 1350-1354.
2. Mullis, K. B. & Faloona, F. A. (1987) Methods Enzymol. 155, 335-350.
3. Guatelli, J. C., Whitfield, K. M., Kwoh, D. Y., Barringer, K. J., Richman, D. D. & Gingeras, T. R. (1990) Proc. Natl. Acad. Sci. USA 87, 1874-1878.
4. Barany, F. (1991) Proc. Natl. Acad. Sci. USA 88, 189-193.
5. Walker, G. T., Fraiser, M. S., Schramm, J. L., Little, M. C., Nadeau, J. G. & Malinowski, D. P. (1992) Nucleic Acids Res. 20, 1691-1696.
6. Chu, B. C. F., Kramer, F. R. & Orgel, L. E. (1986) Nucleic Acids Res. 14, 5591-5603.
7. Kramer, F. R. & Lizardi, P. M. (1989) Nature (London) 339, 401-402.
8. Lomeli, H., Tyagi, S., Pritchard, C. G., Lizardi, P. M. & Kramer, F. R. (1989) Clin. Chem. 35, 1826-1831.
9. Miele, E. A., Mills, D. R. & Kramer, F. R. (1983) J. Mol. Biol. 171, 281-295.
10. Kacian, D. L., Mills, D. R., Kramer, F. R. & Spiegelman, S. (1972) Proc. Natl. Acad. Sci. USA 69, 3038-3042.
11. Mills, D. R., Kramer, F. R. & Spiegelman, S. (1973) Science 180, 916-927.
12. Lizardi, P. M., Guerra, C. E., Lomeli, H., Tussie-Luna, I. & Kramer, F. R. (1988) Biol/Technology 6, 1197-1202.
13. Dobkin, C., Mills, D. R., Kramer, F. R. & Spiegelman, S. (1979) Biochemistry 18, 2038-2044.
14. Kramer, F. R. & Mills, D. R. (1981) Nucleic Acids Res. 19, 5109-5124.
15. Levisohn, R. & Spiegelman, S. (1968) Proc. Natl. Acad. Sci. USA 60, 866-872.
16. Morrissey, D. V., Lombardo, M., Eldredge, J. K., Kearney, K. R., Groody, E. P. & Collins, M. L. (1989) Anal. Biochem. 81, 345-359.
17. Adachi, A., Gendelman, H. E., Koenig, S., Folks, T., Willey R., Rabson, A. & Martin, M. A. (1986) J. Virol. 59, 284-291.
18. Axelrod, V. D., Brown, E., Priano, C. & Mills, D. R. (1991) Virology 184, 595-608.
19. Syvänen, A.-C., Laaksonen, M. & Söderlund, H. (1986) Nucleic Acids Res. 14, 5037-5048.
20. Langer, P. R., Waldrop, A. A. & Ward, D. C. (1981) Proc. Natl. Acad. Sci. USA 78, 6633-6637.
21. Uhlen, M. (1989) Nature (London) 340, 733-734.
22. Popovic, M., Read-Connole, E. & Gallo, R. C. (1984) Lancet ii, 1472-1473.
23. Shaw, G. M., Hahn, B. H., Arya, S. K., Groopman, J. E., Gallo, R. C. & Wong-Staal, F. (1984) Science 226, 1165-1171.
24. Pelligrino, M. G., Lewin, M., Meyer, W. A., III, Lanciotti, R. S., Bhaduri-Hauck, L., Volsky, D. J., Sakai, K., Folks, T. M. & Gillespie, D. (1987) BioTechniques 5, 452-460.
25. Thompson, J. & Gillespie, D. (1987) Anal. Biochem. 163, 281-291.
26. Nishihara, T., Mills, D. R. & Kramer, F. R. (1983) J. Biochem. (Tokyo) 93, 669-674.
27. Mills, D. R., Kramer, F. R., Dobkin, C., Nishihara, T. & Cole, P. E. (1980) Biochemistry 19, 228-236.
28. Weissmann, C., Feix, G. & Slor, H. (1968) Cold Spring Harbor Symp. Quant. Biol. 33, 83-100.
29. Kleppe, K., van de Sande, J. H. & Khorana, H. G. (1970) Proc. Natl. Acad. Sci. USA 67, 68-73.
30. Fareed, G. C., Wilt, E. M. & Richardson, C. C. (1971) J. Biol. Chem. 246, 925-932.
31. Sano, H. & Feix, G. (1974) Biochemistry 13, 5110-5115.
32. Shah, J. S., Liu, J., Smith, J., Popoff, S., Radcliffe, G., O'Brien, W. J., Serpe, G., Olive, D. M. & King, W. (1994) J. Clin. Microbiol. 32, 2718-2724.
33. Burg, J. L., Cahill, P. B., Kutter, M., Stefano, J. E. & Mahan, D. E. (1995) Anal. Biochem. 230, 263-272.
34. Tyagi, S. & Kramer, F. R. (1996) Nat. Biotechnol. 14, 303-308.
35. Landegren, U., Kaiser, R., Sanders, J. & Hood, L. (1988) Science 241, 1077-1080.
36. Moore, M. J. & Sharp, P. A. (1992) Science 256, 992-997.
37. Hall, B. D. & Spiegelman, S. (1961) Proc. Natl. Acad. Sci. USA 47, 137-146.
38. Gillespie, D. & Spiegelman, S. (1965) J. Mol. Biol. 12, 829-842.
39. Haruna, I. & Spiegelman, S. (1965) Science 150, 884-886.