Nondefective rotavirus mutants with an NSP1 gene which has a deletion of 500 nucleotides, including a cysteine-rich zinc finger motif-encoding region (nucleotides 156 to 248), or which has a nonsense codon at nucleotides 153 to 155

Journal of Virology

Volumn 70, Issue 6, 1996, Pages 4125-4130

  Taniguchi, Koki ^a   Kojima, Kazunobu ^a   Urasawa, Shozo ^a  

^a SAPPORO MEDICAL UNIVERSITY SCHOOL OF MEDICINE   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ZINC FINGER PROTEIN;

ARTICLE; GENE MUTATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; ROTAVIRUS; STOP CODON; VIRUS GENE; VIRUS ISOLATION; VIRUS REPLICATION;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CATTLE; CODON, NONSENSE; GENE DELETION; GENES, VIRAL; MOLECULAR SEQUENCE DATA; MUTATION; ROTAVIRUS; VIRAL NONSTRUCTURAL PROTEINS; ZINC FINGERS;

EID: 0029892513     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (33)

1. Ballard, A., M. A. McCrae, and U. Desselberger. 1992. Nucleotide sequences of normal and rearranged RNA segments 10 of human rotaviruses. J. Gen. Virol. 73:633-638.
2. Bremont, M., A. Charpilienne, O. Chabanne, and J. Cohen. 1987 Nueleotide sequence and expression in Escherichia coli of the gene encoding the nonstructural protein NCVP2 of bovine rotavirus. Virology 161:138-144.
3. Brottier, P., P. Nandi, M. Bremont, and J. Cohen. 1992. Bovine rotavirus segment 5 protein expressed in the baculovirus system interacts with zinc and RNA. J. Gen. Virol. 73:1931-1938.
4. Dunn, S. J., T. L. Cross, and H. B. Greenberg. 1994. Comparison of the rotavirus nonstructural protein NSP1 (NS53) from different species by sequence analysis and Northern blot hybridization. Virology 203:178-183.
5. Estes, M. K., and J. Cohen. 1989. Rotavirus gene structure and function. Microbiol. Rev. 53:410-449.
6. Estes, M. K., D. Y. Graham, and D. H. Dimitrov. 1984. The molecular epidemiology of rotavirus gastroenteritis, p. 1-22. In J. L. Melnick (ed.), Progress in medical virology. S. Karger, Basel.
7. Gorziglia, M., Y. Hoshino, A. Buckler-White, I. Blumentals, R. Glass, J. Flores, A. Z. Kapikian, and R. M. Chanock. 1986. Conservation of amino acid sequence of VP8 and cleavage region of 84-kDa outer capsid protein among rotaviruses recovered from asymptomatic neonatal infection. Proc. Natl. Acad. Sci. USA 83:7039-7043.
8. Gorziglia, M., K. Nishikawa, and N. Fukuhara. 1989. Evidence of duplication and deletion in super short segment 11 of rabbit rotavirus Alabama strain. Virology 170:587-590.
9. Hua, J., X. Chen, and J. T. Patton. 1994. Deletion mapping of the rotavirus metalloprotein NS53 (NSP1): the conserved cysteine-rich region is essential for virus-specific RNA binding. J. Virol. 68:3990-4000.
10. Hua, J., E. A. Mansell, and J. T. Patton. 1993. Comparative analysis of the rotavirus NS53 gene: conservation of basic and cysteine-rich regions in the protein and possible stem-loop structures in the RNA. Virology 196:372378.
11. Hua, J., and J. T. Patton. 1994. The carboxyl-half of the rotavirus protein NS53 (NSP1) is not required for virus replication. Virology 198:567-576.
12. Hundley, F., B. Biryahwaho, and V. Desselberger. 1985. Genome rearrangements of bovine rotavirus after serial passage at high multiplicity of infection. Virology 143:88-103.
13. Hundley, F., M. McIntyre, B. Clark, G. Beards, D. Wood, I. Chrystie, and U. Desselberger. 1987. Heterogeneity of genome rearrangements in rotaviruses isolated from a chronically infected immunodeficient child. J. Virol. 61:33653372.
14. Kapikian, A. Z., and R. M. Chanock. 1990. Rotaviruses, p. 1353-1404. In B. N. Fields, D. N. Knipe, R. M. Chanock, J. L. Melnick, B. Roizman, and R. E. Shope (ed.), Virology. Raven Press, New York.
15. 14a.Kojima, K., K. Taniguchi, and S. Urasawa. 1996. Species-specific and interspecies relatedness of NSP1 sequences in human, porcine, feline, and equine rotavirus strains. Arch. Virol. 141:1-12.
16. Matsui, S. M., E. R. Mackow, S. Matsuno, P. S. Paul, and H. B. Greenberg. 1990. Sequence analysis of gene 11 equivalents from "short" and "super short" strains of rotavirus. J. Virol. 64:120-124.
17. Mattion, N. M., J. Cohen, C. Aponte, and M. K. Estes. 1992. Characterization of an oligomerization domain and RNA-binding properties on rotavirus nonstructural protein NS34. Virology 190:68-83.
18. Mattion, N. M., S. A. Gonzalez, O. Burone, R. Bellinzoni, J. L. La Torre, and E. A. Scodeller. 1988. Rearrangement of genomic segment 11 in two swine rotavirus strains. J. Gen. Virol. 69:695-698.
19. Mitchell, D. B., and G. W. Both. 1990. Conservation of a potential metal binding motif despite extensive sequence diversity in the rotavirus nonstructural protein NS53. Virology 174:618-621.
20. Poncet, D., C. Aponte, and J. Cohen. 1993. Rotavirus protein NSP3 (NS34) is bound 10 the 3 end consensus sequence of viral mRNAs in infected cells. J. Virol. 67:3159-3165.
21. Pongsuwanna, Y., K. Taniguchi, M. Choonthanom, M. Chiwakul, C. Jayavasu, D. R. Snodgrass, and S. Urasawa. 1990. Serological and genetic characterization of bovine rotaviruses in Thailand by ELISA and RNA-RNA hybridization: detection of numerous non-serotype 6 strains. Southeast Asian J. Trop. Med. Public Health 21:607-613.
22. Pongsuwanna, Y., K. Taniguchi, M. Choonthanom, M. Chiwakul, T. Susansook, S. Saguanwongse, C. Jayavasu, and S. Urasawa. 1989. Subgroup and serotype distributions of human, bovine, and porcine rotavirus in Thailand. J. Clin. Microbiol. 27:1956-1960.
23. Pongsuwanna, Y., K. Taniguchi, F. Wakasugi, Y. Sutivijit, M. Chiwakul, P. Warachit, C. Jayavasu, and S. Urasawa. 1993. Distinct yearly change of serotype distribution of human rotavirus in Thailand as determined by ELISA and PCR. Epidemiol. Infect. 111:407-412.
24. Posnett, D. N., and J. P. Tam. 1989. Multiple antigenic peptide method for producing antipeptide site-specific antibodies. Methods Enzymol. 178:739746.
25. Shen, S., B. Burke, and U. Desselberger. 1994. Rearrangement of the VP6 gene of a group A rotavirus in combination with a point mutation affecting trimer stability. J. Virol. 68:1682-1688.
26. Taniguchi, K., and S. Urasawa. 1995. Diversity in rotavirus genomes. Semin. Virol. 6:123-131.
27. Taniguchi, K., T. Urasawa,Y. Pongsuwanna, M. Choonthanom, C. Jayavasu, and S. Urasawa. 1991. Molecular and antigenic analyses of serotypes 8 and 10 of bovine rotaviruses in Thailand. J. Gen. Virol. 72:2929-2937.
28. Taniguchi, K., T. Urasawa, and S. Urasawa. 1993. Independent segregation of the VP4 and the VP7 genes in bovine rotaviruses as confirmed by VP4 sequence analysis of G8 and G10 bovine rotavirus strains. J. Gen. Virol. 74:1215-1221.
29. Taniguchi, K., F. Wakasugi, Y. Pongsuwanna, T. Urasawa, S. Ukae, S. Chiba, and S. Urasawa. 1992. Identification of human and bovine rotavirus serotypes by polymerase chain reaction. Epidemiol. Infect. 109:303-312.
30. 28a. Taniguchi, K., and S. Urasawa. Unpublished data.
31. Tian, Y., O. Tarlow, A. Ballard, U. Desselberger, and M. A. McCrae. 1993. Genomic concatemerization/deletion in rotaviruses: a new mechanism for generating rapid genetic change of potential epidemiological importance. J. Virol. 67:6625-6632.
32. Wu, H., K. Taniguchi, F. Wakasugi, S. Ukae, S. Chiba, M. Ohseto, A. Hasegawa, T. Urasawa, and S. Urasawa. 1994. Survey on the distribution of the gene 4 alleles of human rotaviruses by polymerase chain reaction. Epidemiol. Infect. 112:615-622.
33. Xu, L., Y. Tian, O. Tarlow, D. Harbour, and M. A. McCrae. 1994. Molecular biology of rotaviruses. IX. Conservation and divergence in genome segment 5. J. Gen. Virol. 75:3413-3421.