Fine mapping of the human pentraxin gene region on chromosome 1q23

Immunogenetics

Volumn 44, Issue 1, 1996, Pages 62-69

  Walsh, Marie Therese ^a   Divane, Aspasia ^b,c   Whitehead, Alexander S ^a  

^a TRINITY COLLEGE DUBLIN   (Ireland)

^b UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^c Diagnostic Genetic Centre   (Greece)

Author keywords

[No Author keywords available]

Indexed keywords

C REACTIVE PROTEIN; DNA BINDING PROTEIN; FC RECEPTOR; FODRIN; HISTONE; IMMUNOGLOBULIN E RECEPTOR; SERUM AMYLOID P;

ARTICLE; CHROMOSOME 1Q; GENE CLUSTER; GENE MAPPING; HUMAN; HUMAN CELL; IMMUNOGENETICS; PRIORITY JOURNAL; PSEUDOGENE; RECEPTOR GENE; YEAST ARTIFICIAL CHROMOSOME;

EID: 0029892377     PISSN: 00937711     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF02602657     Document Type: Article

References (68)

1. Altschul, S. F., Gish, W., Miller, W., Myers, E. W., and Lipman, D. J. Basic local alignment search tool. J Mol Biol 215: 403-410, 1990
2. Anand, R., Riley, J. H., Butler, R., Smith, J. C., and Markham, A. F. A 3.5 genome equivalent multi access YAC library: construction, characterisation, screening and storage. Nucleic Acids Res 18: 1951-1956, 1990
3. Baltz, M. L., deBeer, F. C., Feinstein, A., Munn, E. A., Milstein, C. P., Fletcher, T. C., March, J. F., Taylor, J., Bruton, C., Clamp, J. R., Davies, A. J. S., and Pepys, M. B. Phylogenetic aspects of C-reactive protein and related proteins. Ann NY Acad Sci 398: 49-75, 1982
4. Benn, P. A. and Perle, M. A. Chromosome staining and banding techniques. In D. E. Rooney and B. H. Czepulkowski (eds.): Human Cytogenetics: A Practical Approach, pp. 106- 109, IRL Press, Oxford, 1992
5. Bodmer, B. and Siboo, R. Isolation of mouse C-reactive protein from liver and serum. J Immunol 118: 1086-1089, 1977
6. Brevario, F., d'Aniello, E. M., Golay, J., Peri, G., Bottazi, B., Bairoch, A., Saccone, S., Marzella, R., Predazzi, V., Rocchi, M., Della Valle, G., Dejana, E., Mantovani, A., and Introna, M. Interleukin-1 inducible genes in endothelial cells. J Biol Chem 267: 22190-22197, 1992
7. Burke, D. T., Carle, G. F., and Olson, M. V. Cloning of large segments of exogenous DNA into yeast by means of artificial chromosome vectors. Science 236: 806-812, 1987
8. Castano, E. M. and Frangione, B. Biology of disease; human amyloidosis, Alzheimer Disease and related disorders. Lab Invest 58: 122-131, 1988
9. Claus, D. R., Siegel, J., Petras, K., Skour, D., Osmond, A., and Gewurz, H. Complement activation by interaction of multiple polyanions and polycations in the presence of C-reactive protein. J Immunol 118: 83-87, 1977
10. DeBeer, F. C., Baltz, M. L., Holford, S., Feinstein, A., and Pepys, M. B. Fibronectin and C4-binding protein are selectively bound by aggregated amyloid P component. J Exp Med 154: 1134-1149, 1981
11. DeWit, T. P. M., Suijkerbuijk, R. F., Capel, P. J. A., van Kessel, A. G., and van der Winkel, J. G. J. Assignment of three human high-affinity Fcγ receptor I genes to chromosome 1, band q21.1. Immunogenetics 38: 57-59, 1993
12. DuClos, T. W., Zlock, L. T., and Rubin, R. L. Analysis of the binding of C-reactive protein to histones and chromatin. J Immunol 141: 4266-4278, 1988
13. Eckert, R. L. and Green, H. Structure and evolution of the human involucrin gene. Cell 46: 583-589, 1986
14. Ferrari, S., Calabretta, B., de Riel, J. K., Battini, R., Ghezzo, F., Lauret, E., Griffin, C., Emanuel, B. S., Gurrieri, F., and Baserga, R. Structural and functional analysis of a growth-regulated gene, the human calcyclin. J Biol Chem 262: 8325-8332, 1987
15. Fiedel, B. A. Influence of tuftsin-like synthetic peptide derived from C-reactive protein (CRP) on platelet behaviour. Immunology 64: 487-493, 1988
16. Floyd-Smith, G., Whitehead, A. S., Colten, H. R., and Francke, U. The human C-reactive protein gene (CRP) and serum amyloid P component gene (APCS) are located on the proximal long arm of chromosome 1. Immunogenetics 24: 171-176, 1986
17. Goldman, N. D., Liu, T., and Lei, K. Structural analysis of the locus containing the human C-reactive protein gene and its related pseudogene. J Biol Chem 262: 7001-7005, 1987
18. Green, L., Antwerpen, V., Stein, J., and Stein, G. A major human histone gene cluster on the long arm of chromosome 1. Science 226: 838-840, 1984
19. Hamazaki, H. Calcium-dependent binding of human serum amyloid P component to Alzheimer's β-amyloid peptide. J Biol Chem 270: 10392-10394, 1995
20. Hardas, B. D., Zhang, J., Trent, J. M., and Elder, J. T. Direct evidence for homologous sequences on the paracentric regions of human chromosome 1. Genomics 21: 359-363, 1994
21. Hawkins, P. N. and Pepys, M. B. In M. B. Pepys (ed.): Acute Phase Proteins in the Acute Phase Response, pp. 187-206, Springer, London, 1989
22. Hicks, P. S., Saunero-Nava, L., DuClos, T. W., and Mold, C. Serum amyloid P binds to histones and activates the classical complement pathway. J Immunol 149: 3689-3694, 1992
23. Hupp, K., Siwarski, D., Mock, B. A., and Kinet. J. Gene mapping of the three subunits of the high affinity FcR for IgE to mouse chromosomes 1 and 19. J Immunol 143: 3787-3791, 1989
24. Jones, D. A., Carlton, D. P. D., McIntyre, T. M., Zimmerman, G. A., and Prescott, S. M. Molecular cloning of human prostaglandin endoperoxide synthase type II and demonstration of expression in response to cytokines. J Biol Chem 268: 9049-9054, 1993
25. Kalaria, R. N., Galloway, P. G., and Perry, G. Widespread serum amyloid P immunoreactivity in cortical amyloid deposits and the neurofibrillary pathology of Alzheimer's disease and other degenerative disorders. Neuropathol Appl Neurobiol 17: 189-201, 1991
26. Kilpatrick, J. M. and Volanakis, J. E. Opsonic properties of C-reactive protein. Stimulation by phorbolmyristate acetate enables human neurophils to phagocytize C-reactive protein covered cells. J Immunol 134: 3364-3370, 1985
27. Kingsmore, S. F., Watson, M. L., Howard, T. A., and Seldin, M. F. A 6000 kb segment of chromosome 1 is conserved in human and mouse. EMBO J 8: 4073-4080, 1989
28. Kochan, J. L. F., Pettine, J., Hakimi, J., Kishi, K., and Kinet, J. P. Isolation of the gene coding for the alpha-subunit of the human high affinity IgE receptor. Nucleic Acids Res 16: 3584, 1988
29. Kushner, I. The acute phase response: an overview. Meth Enzymol 163: 373-383, 1982
30. Lee, T. H., Lee, G. W., Ziff, E. B., and Vilcek, J. Isolation and characterisation of eight tumour necrosis factor induced gene sequences from human fibroblasts. Mol Cell Biol 10: 1982-1988, 1990
31. Linnenbach, A. J., Speicher, D. W., Marchesi, V. T. and Forget, B. G. Cloning of a portion of the chromosomal gene for human erythrocyte α-spectrin by using a synthetic gene fragment. Proc Natl Acad Sci USA 83: 2397-2401, 1986
32. Marashi, F., Helms, S., Shiels, A., Silverstein, A., Greenspan, D. S., Stein, G., and Stein, J. Enhancer-facilitated expression of prokaryotic and eukaryotic genes using human histone gene 5′ regulatory sequences. Biochem Cell Biol 64: 277-289, 1986
33. Martin, L. H., Calabi, F., Lefebvre, F.-A., Bilsland, C. A. G., and Milstein, C. Structure and expression of the human thymocyte antigens CD1a, CD1b and CD1c. Proc Natl Acad Sci USA 84: 9189-9193, 1987
34. Mendez, M. J., Scott, P., Erickson, P. B., Drabkin, H. A., and Gemmill, R. M. In D. Nelson and B. Brownstein (eds.): YAC Libraries: A User's Guide, pp. 57-91, W. H. Freeman Press, New York, 1994
35. Morley, J. J. and Kushner, I. Serum C-reactive protein levels in disease. Ann NY Acad Sci 389: 406-418, 1982
36. Mortensen, R. F., Beisel, K., Zeleznik, N. J., and Le, P. T. Acute phase reactants of mice. II. Strain dependence of serum amyloid-P component (SAP) levels and response to inflammation. J Immunol 130: 885-889, 1983
37. Moseley, W. S. and Seldin, M. F. Definition of mouse chromosome 1 and 3 gene linkage groups that are conserved on human chromosome 1: evidence that a conserved linkage group spans the centromere of human chromosome 1. Genomics 5: 899-905, 1989
38. Moseley, W. S., Watson, M. L., Kingsmore, S. F., and Seldin, M. F. CD1 defines conserved linkage group border between human chromosome 1 and mouse chromosomes 1 and 3. Immunogenetics 30: 378-382, 1989
39. Noland, T. D., Friday, B. B., Maulit, M. T., and Gerton, G. L. The sperm acrosomal matrix contains a novel member of the pentaxin family of calcium-dependent binding proteins. J Biol Chem 269: 32607-32614, 1994
40. Ohnishi, S., Maeda, S., Shimada, K., and Arao, T. Isolation and characterisation of the complete complementary and genomic DNA sequences of human serum amyloid P component. J Biochem 100: 849-858, 1986
41. Oliviera, E. B., Gotschlich, E. C., and Liu, T.-Y. Comparative studies on the binding properties of human and rabbit C-reactive proteins. J Immunol 124: 1396-1402, 1980
42. Osmand, A. P., Friedenson, B., Gewurz, H., Painter, R. H., Hofmann, T., and Shelton, E. Characterisation of C-reactive protein and the complement subcomponent C1t as homologous proteins displaying pentameric symmetry (pentraxins). Proc Natl Acad Sci USA 74: 739-743, 1977
43. Peltz, G. A., Grundy, H. O., Lebo, R. V., Yssel, H., Barsh, G. S., and Moore, K. W., Human FcγRIII: cloning, expression and identification of the chromosomal locus of two Fc receptors for IgG. Proc Natl Acad Sci USA 86: 1013-1017, 1989
44. Pepys, M. B., Baltz, M., Gomer, K., Davis, A. J. S., and Doenhoff, M. Serum amyloid-P component is an acute phase reactant in mouse. Nature 278: 259-261, 1979
45. Pepys, M. B. and Butler, P. J. G. Serum amyloid P-component is the major calcium dependent specific DNA binding protein of the serum. Biochem Biophys Res Commun 148: 308-313, 1987
46. Pinkel, S., Straume, T., and Gray, J. W. Cytogenetic analysis using quantitative, high sensitivity fluorescence hybridisation. Proc Natl Acad Sci USA 83: 2934-2938, 1986
47. Reid, M. S. and Blobel, C. P. Apexin, an acrosomal pentraxin. J Biol Chem 269: 32615-32620, 1994
48. Riley, J., Butler, R., Ogilvie, D., Finniear, R., Jenner, D., Powell, S., Anand, R., Smith, J. C., and Markham, A. F. A novel rapid method for the isolation of terminal sequences from yeast artificial chromosomes (YAC) clones. Nucleic Acids Res 18: 2887-2890, 1990
49. Robey, F. A., Jones, K. D., Tanata, T., and Liu, T.-Y. Binding of C-reactive protein to chromatin and nucleosome core particles. A possible physiological role of C-reactive protein. J Biol Chem 259: 7311-7316, 1984
50. Rubio, N., Sharp, P. M., Rits, M., Zahedi, K., and Whitehead, A. S. Structure, expression and evolution of guinea pig serum amyloid P-component and C-reactive protein. J Biochem 113: 277-284, 1993
51. Saiki, R. K., Gelfand, D. H., Stoffel, S., Scharf, S. J., Higuchi, R., Horn, G. T., Mullis, K. B., and Erlich, H. A. Primer-directed enzyme amplification of DNA with a thermostable DNA polymerase. Science 239: 487-491, 1988
52. Sammartino, L., Webber, L. M., Hogarth, P. M., McKenzie, I. F. C., and Garson, O. M. Assignment of the gene coding for human FcRII (CD32) to bands q23q24 on chromosome 1. Immunogenetics 28: 380-381, 1988
53. Sanger, F., Niklen, S., and Coulson, A. R. DNA sequencing with chain termination inhibitors. Proc Natl Acad Sci USA 74: 5463-5467, 1977
54. Schlimgen, A. K., Helms, J. A., Vogel, H., and Perin, M. S. Neuronal pentraxin, a secreted protein with homology to acute phase proteins of the immune system. Neuron 14: 519-526, 1995
55. Seery, L. T., Schoenberg, D. R., Barbaux, S., Sharp, P. M., and Whitehead, A. S. Identification of a novel member of the pentraxin family in Xenopus laevis. Proc R Soc Lond B 253: 263-270, 1993
56. Shephard, E. G., Smith, P. J., Coetzee, S., Strachan, A. F., and deBeer, F. C. Pentraxin binding to isolated rat liver nuclei. Biochemistry J 279: 257-260, 1991
57. Siegel, J., Rent, R., and Gewurz, H. Interaction of the C-reactive protein with the complement system. I. Protamine-induced consumption of complement in acute phase sera. J Exp Med 140: 631-647, 1974
58. Sierra, F., Stein, G., and Stein, J. Structure and in vitro transcription of a human H4 histone gene. Nucleic Acids Res 11: 7069-7086, 1983
59. Steel, D. M. and Whitehead, A. S. The major acute phase reactants: C-reactive protein, serum amyloid P component and serum amyloid A protein. Immunol Today 15: 81-88, 1994
60. Tay, A., Squire, A., Goldberg, H., and Skorecki, K. Assignment of the human prostaglandin-endoperoxide synthase 2 (PTGS2) gene to 1q25 by fluorescence in situ hybridisation. Genomics 23: 718-719, 1994
61. Tennent, G. A., Lovat, L. B., and Pepys, M. B. Serum amyloid P component prevents proteolysis of the amyloid fibrils of Alzheimer's disease and systemic amyloidosis. Proc Nat Acad Sci USA 92: 4299-4303, 1995
62. Tepler, I., Morton, C. C., Shimizu, A., Holcombe, R. F., Eddy, R., Shows, T. B., and Leder, P. The gene for the human mast cell high-affinity IgE receptor alpha chain: chromosomal localisation to 1q21-23 and RFLP analysis. Am J Hum Genet 45: 761-765, 1989
63. Trapani, J. A., Browne, K. A., Dawson, M. J., Ramsay, R. G., Eddy, R. L., Shows, T. B., White, P. C., and Dupont, B. A novel gene constitutively expressed in human lymphoid cells is inducible with interferon-γ in myeloid cells. Immunogenetics 36: 369-376, 1992
64. Volz, A., Korge, B. P., Compton, J. G., Ziegler, A., Steinhert, P. M., and Mischke, D. Physical mapping of epidermal differentiation genes on chromosome 1q21. Genomics 18: 92-99, 1993
65. Whitehead, A. S., Rits, M., and Michaelson, J. Molecular genetics of mouse serum amyloid P component (SAP): cloning and gene mapping. Immunogenetics 28: 388-390, 1988
66. Woo, P., Korenberg, J. R., and Whitehead, A. S., Characterisation of genomic and complementary DNA sequence of human C-reactive protein, and comparison with the complementary DNA sequence of serum amyloid-P component. J Biol Chem 260: 13384-13388, 1985
67. Yuan, J., Wegenka, U. M., Lutticken, C., Buschmann, J., Decker, T., Schindler, C., Heinrich, P. C., and Horn, F. The signalling pathways of IL-6 and gamma interferon converge by the activation of different transcription factors which bind to common responsive DNA elements. Mol Cell Biol 14: 1657-1668, 1994
68. Yunis, I. and Whitehead, A. S. The mouse C-reactive protein gene maps to distal chromosome 1 and, like its human counterpart, is closely linked to the serum amyloid P-component gene. Immunogenetics 32: 361-363, 1990