메뉴 건너뛰기




Volumn 219, Issue 1, 1996, Pages 9-18

Comparisons of the genomic cis-elements and coding regions in RNAβ components of the hordeiviruses barley stripe mosaic virus, lychnis ringspot virus, and poa semilatent virus

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BARLEY; CONTROLLED STUDY; GENOME; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANT VIRUS; PRIORITY JOURNAL; RNA ANALYSIS; VIRUS CLASSIFICATION;

EID: 0029890968     PISSN: 00426822     EISSN: None     Source Type: Journal    
DOI: 10.1006/viro.1996.0217     Document Type: Article
Times cited : (69)

References (50)
  • 1
    • 0018428056 scopus 로고
    • The presence of a cap structure at the 5′-end of barley stripe mosaic virus RNA
    • Agranovsky, A. A., Dolja, V. V., Kagramanova, V. K., and Atabekov, J. G. (1979). The presence of a cap structure at the 5′-end of barley stripe mosaic virus RNA. Virology 95, 208-210.
    • (1979) Virology , vol.95 , pp. 208-210
    • Agranovsky, A.A.1    Dolja, V.V.2    Kagramanova, V.K.3    Atabekov, J.G.4
  • 2
    • 0020073965 scopus 로고
    • Structure of the 3′-extremity of barley stripe mosaic virus RNA: Evidence for internal poly(A) and a 3′-terminal tRNA-like structure
    • Agranovsky, A. A., Dolja, V. V., and Atabekov, J. G. (1982). Structure of the 3′-extremity of barley stripe mosaic virus RNA: Evidence for internal poly(A) and a 3′-terminal tRNA-like structure. Virology 119, 51-58.
    • (1982) Virology , vol.119 , pp. 51-58
    • Agranovsky, A.A.1    Dolja, V.V.2    Atabekov, J.G.3
  • 3
    • 0026794203 scopus 로고
    • Poa semilatent virus, a hordeivirus with no internal polydisperse poly(A) in the 3′-non-coding region of the RNA genome
    • Agranovsky, A. A., Karasev, A. V., Novikov, V. K., Lunina, N. A., Loginov, S., and Tyulkina, L. G. (1992). Poa semilatent virus, a hordeivirus with no internal polydisperse poly(A) in the 3′-non-coding region of the RNA genome. J. Gen. Virol. 73, 2085-2092.
    • (1992) J. Gen. Virol. , vol.73 , pp. 2085-2092
    • Agranovsky, A.A.1    Karasev, A.V.2    Novikov, V.K.3    Lunina, N.A.4    Loginov, S.5    Tyulkina, L.G.6
  • 4
    • 0342925091 scopus 로고
    • Hordeiviruses: Structure and replication
    • (M. H. V. van Regenmortel and H. Fraenkel-Conrat, Eds.). Plenum, New York
    • Atabekov, J. G., and Dolja, V. V. (1986). Hordeiviruses: Structure and replication. In "The Plant Viruses," Vol. 2, "The Rod-Shaped Plant Viruses" (M. H. V. van Regenmortel and H. Fraenkel-Conrat, Eds.), pp. 397-420. Plenum, New York.
    • (1986) "The Plant Viruses," Vol. 2, "The Rod-shaped Plant Viruses" , vol.2 , pp. 397-420
    • Atabekov, J.G.1    Dolja, V.V.2
  • 5
    • 0001171683 scopus 로고
    • A non-capsid protein associated with unencapsidated virus RNA in barley infected with barley stripe mosaic virus
    • Brakke, M. K., Ball, E. M., and Langenberg, W. G. (1988). A non-capsid protein associated with unencapsidated virus RNA in barley infected with barley stripe mosaic virus. J. Gen. Virol. 69, 481-491.
    • (1988) J. Gen. Virol. , vol.69 , pp. 481-491
    • Brakke, M.K.1    Ball, E.M.2    Langenberg, W.G.3
  • 6
    • 0001783059 scopus 로고
    • GENEBEE: A package of computer programs for biopolymer sequence analysis
    • in Russian
    • Brodsky, L. I., Drachev, A. L., Tatuzov, R. L., and Chumakov, K. M. (1990). GENEBEE: A package of computer programs for biopolymer sequence analysis. Biopolim. Kletka 7, 10-14. [in Russian]
    • (1990) Biopolim. Kletka , vol.7 , pp. 10-14
    • Brodsky, L.I.1    Drachev, A.L.2    Tatuzov, R.L.3    Chumakov, K.M.4
  • 7
    • 0006053580 scopus 로고
    • Hordeiviruses: Biology and pathology
    • (M. H. V. van Regenmortel and H. Fraenkel-Conrat, Eds.). Plenum, New York
    • Carroll, T. W. (1986). Hordeiviruses: Biology and pathology. In "The Plant Viruses," Vol. 2, "The Rod-Shaped Plant Viruses" (M. H. V. van Regenmortel and H. Fraenkel-Conrat, Eds.), pp. 373-395. Plenum, New York.
    • (1986) "The Plant Viruses," Vol. 2, "The Rod-shaped Plant Viruses" , vol.2 , pp. 373-395
    • Carroll, T.W.1
  • 8
    • 0002599106 scopus 로고
    • Bromovirus host specificity and systemic infection
    • De Jong, W., and Ahlquist, P. (1991). Bromovirus host specificity and systemic infection. Semin. Virol. 2, 97-105.
    • (1991) Semin. Virol. , vol.2 , pp. 97-105
    • De Jong, W.1    Ahlquist, P.2
  • 9
    • 0025784476 scopus 로고
    • Phylogeny of capsid proteins of rod-shaped and filamentous RNA plant viruses: Two families with distinct patterns of sequence and probably structure conservation
    • Dolja, V. V., Boyko, V. P., Agranovsky, A. A., and Koonin, E. V. (1991). Phylogeny of capsid proteins of rod-shaped and filamentous RNA plant viruses: Two families with distinct patterns of sequence and probably structure conservation. Virology 184, 79-86.
    • (1991) Virology , vol.184 , pp. 79-86
    • Dolja, V.V.1    Boyko, V.P.2    Agranovsky, A.A.3    Koonin, E.V.4
  • 10
    • 0028534794 scopus 로고
    • The barley stripe mosaic virus γb gene encodes a cysteine-rich autoregulatory RNA-binding protein that affects pathogenesis
    • Donald, R. G. K., and Jackson, A. O. (1994). The barley stripe mosaic virus γb gene encodes a cysteine-rich autoregulatory RNA-binding protein that affects pathogenesis. Plant Cell 6, 1593-1606.
    • (1994) Plant Cell , vol.6 , pp. 1593-1606
    • Donald, R.G.K.1    Jackson, A.O.2
  • 11
    • 0027179266 scopus 로고
    • Serological analysis of barley stripe mosaic virus-encoded proteins in infected barley
    • Donald, R. G. K., Zhou, H., and Jackson, A. O. (1993). Serological analysis of barley stripe mosaic virus-encoded proteins in infected barley. Virology 195, 659-668.
    • (1993) Virology , vol.195 , pp. 659-668
    • Donald, R.G.K.1    Zhou, H.2    Jackson, A.O.3
  • 13
    • 0027966461 scopus 로고
    • cis-Acting sequences in the replication of plant viruses with plus-sense RNA genomes
    • Duggal, R., Lahser, F. C., and Hall, T. C. (1994). cis-Acting sequences in the replication of plant viruses with plus-sense RNA genomes. Annu. Rev. Phytopathol. 32, 287-309.
    • (1994) Annu. Rev. Phytopathol. , vol.32 , pp. 287-309
    • Duggal, R.1    Lahser, F.C.2    Hall, T.C.3
  • 14
    • 0025130645 scopus 로고
    • An improved method for sequencing of RNA templates
    • Fichot, O., and Girard, M. (1990). An improved method for sequencing of RNA templates. Nucleic Acids Res. 18, 6162.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 6162
    • Fichot, O.1    Girard, M.2
  • 15
    • 0025373966 scopus 로고
    • Site-directed mutations in the Sindbis virus 6K reveal sites for fatty acylation and the underacylated protein affects virus release and virion structure
    • Gaedigk-Nitschko, K., Ding, M., Levy, M. A., and Schlesinger, M. J. (1990). Site-directed mutations in the Sindbis virus 6K reveal sites for fatty acylation and the underacylated protein affects virus release and virion structure. Virology 175, 282-291.
    • (1990) Virology , vol.175 , pp. 282-291
    • Gaedigk-Nitschko, K.1    Ding, M.2    Levy, M.A.3    Schlesinger, M.J.4
  • 16
    • 0343359593 scopus 로고
    • Viral proteins containing the purine NTP-binding sequence pattern
    • Gorbalenya, A. E., and Koonin, E. V. (1989). Viral proteins containing the purine NTP-binding sequence pattern. Nucleic Acids Res. 16, 291-303.
    • (1989) Nucleic Acids Res. , vol.16 , pp. 291-303
    • Gorbalenya, A.E.1    Koonin, E.V.2
  • 17
    • 0023705613 scopus 로고
    • A novel superfamily of nucleoside triphosphate binding motif containing proteins which are probably involved in duplex unwinding in DNA and RNA replication and recombination
    • Gorbalenya, A. E., Koonin, E. V., Donchenko, A. P., and Blinov, V. M. (1988). A novel superfamily of nucleoside triphosphate binding motif containing proteins which are probably involved in duplex unwinding in DNA and RNA replication and recombination. FEBS Lett. 235, 16-24.
    • (1988) FEBS Lett. , vol.235 , pp. 16-24
    • Gorbalenya, A.E.1    Koonin, E.V.2    Donchenko, A.P.3    Blinov, V.M.4
  • 18
    • 0024344173 scopus 로고
    • Two related superfamilies of putative helicases involved in replication, repair and expression of DNA and RNA genomes
    • Gorbalenya, A. E., Koonin, E. V., Donchenko, A. P., and Blinov, V. M. (1989). Two related superfamilies of putative helicases involved in replication, repair and expression of DNA and RNA genomes. Nucleic Acids Res. 17, 4713-4730.
    • (1989) Nucleic Acids Res. , vol.17 , pp. 4713-4730
    • Gorbalenya, A.E.1    Koonin, E.V.2    Donchenko, A.P.3    Blinov, V.M.4
  • 19
    • 0024296565 scopus 로고
    • A one tube reaction for the synthesis of blunt-ended double-stranded cDNA
    • Gubler, U. (1988). A one tube reaction for the synthesis of blunt-ended double-stranded cDNA. Nucleic Acids Res. 16, 2726.
    • (1988) Nucleic Acids Res. , vol.16 , pp. 2726
    • Gubler, U.1
  • 20
    • 0023047489 scopus 로고
    • The complete nucleotide sequence of RNAβ from the type strain of barley stripe mosaic virus
    • Gustafson, G., and Armour, S. L. (1986). The complete nucleotide sequence of RNAβ from the type strain of barley stripe mosaic virus. Nucleic Acids Res. 14, 3895-3909.
    • (1986) Nucleic Acids Res. , vol.14 , pp. 3895-3909
    • Gustafson, G.1    Armour, S.L.2
  • 21
    • 0024689106 scopus 로고
    • Nucleotide sequence of barley stripe mosaic virus RNAα: RNAα encodes a single polypeptide with homology to corresponding proteins from other viruses and to the BSMV βb protein
    • Gustafson, G. D., Armour, S. L., Gamboa, G. C., Burgett, S. G., and Shepherd, J. W. (1989). Nucleotide sequence of barley stripe mosaic virus RNAα: RNAα encodes a single polypeptide with homology to corresponding proteins from other viruses and to the BSMV βb protein. Virology 170, 370-377.
    • (1989) Virology , vol.170 , pp. 370-377
    • Gustafson, G.D.1    Armour, S.L.2    Gamboa, G.C.3    Burgett, S.G.4    Shepherd, J.W.5
  • 22
    • 0023267418 scopus 로고
    • Nucleotide sequence and genetic organization of barley stripe mosaic virus RNAγ
    • Gustafson, G., Hunter, B. G., Hanau, R., Armour, S. L., and Jackson, A. O. (1987). Nucleotide sequence and genetic organization of barley stripe mosaic virus RNAγ. Virology 158, 394-406.
    • (1987) Virology , vol.158 , pp. 394-406
    • Gustafson, G.1    Hunter, B.G.2    Hanau, R.3    Armour, S.L.4    Jackson, A.O.5
  • 23
    • 0024570629 scopus 로고
    • Relationship of lychnis ringspot virus to barley stripe mosaic virus and poa semilatent virus
    • Hunter, B. G., Smith, J., Fattouh, F., and Jackson, A. O. (1989). Relationship of lychnis ringspot virus to barley stripe mosaic virus and poa semilatent virus. Intervirology 30, 18-26.
    • (1989) Intervirology , vol.30 , pp. 18-26
    • Hunter, B.G.1    Smith, J.2    Fattouh, F.3    Jackson, A.O.4
  • 27
    • 0027504136 scopus 로고
    • Evolution and taxonomy of positive-strand RNA viruses: Implications of comparative analysis of amino acid sequences
    • Koonin, E. V., and Dolja, V. V. (1993). Evolution and taxonomy of positive-strand RNA viruses: Implications of comparative analysis of amino acid sequences. Crit. Rev. Biochem. Mol. Biol. 28, 375-430.
    • (1993) Crit. Rev. Biochem. Mol. Biol. , vol.28 , pp. 375-430
    • Koonin, E.V.1    Dolja, V.V.2
  • 29
    • 0028083948 scopus 로고
    • Plasmodesmata in relation to viral movement within leaf tissues
    • Lucas, W. G., and Gilbertson, R. L. (1994). Plasmodesmata in relation to viral movement within leaf tissues. Annu. Rev. Phytopathol. 32, 387-411.
    • (1994) Annu. Rev. Phytopathol. , vol.32 , pp. 387-411
    • Lucas, W.G.1    Gilbertson, R.L.2
  • 30
    • 0027228058 scopus 로고
    • Nucleotide sequence and genetic organization of peanut clump virus RNA2 and partial characterization of deleted forms
    • Manohar, S. K., Guilley, H., Dollet, M., Richards, K., and Jonard, G. (1993). Nucleotide sequence and genetic organization of peanut clump virus RNA2 and partial characterization of deleted forms. Virology 195, 33-41.
    • (1993) Virology , vol.195 , pp. 33-41
    • Manohar, S.K.1    Guilley, H.2    Dollet, M.3    Richards, K.4    Jonard, G.5
  • 31
    • 0027535328 scopus 로고
    • Bromovirus movement protein genes play a crucial role in host specificity
    • Mise, K., Allison, R. F., Janda, M., and Ahlquist, P. (1993). Bromovirus movement protein genes play a crucial role in host specificity. J. Virol. 67, 2815-2823.
    • (1993) J. Virol. , vol.67 , pp. 2815-2823
    • Mise, K.1    Allison, R.F.2    Janda, M.3    Ahlquist, P.4
  • 32
    • 0000234828 scopus 로고
    • Nucleotide sequence of the open reading frames adjacent to the coat protein cistron in potato virus X genome
    • Morozov, S. Yu., Lukasheva, L. I., Chernov, B. K., Skryabin, K. G., and Atabekov, J. G. (1987). Nucleotide sequence of the open reading frames adjacent to the coat protein cistron in potato virus X genome. FEBS Lett. 213, 438-442.
    • (1987) FEBS Lett. , vol.213 , pp. 438-442
    • Morozov, S.Yu.1    Lukasheva, L.I.2    Chernov, B.K.3    Skryabin, K.G.4    Atabekov, J.G.5
  • 33
    • 0024339896 scopus 로고
    • Probable reassortment of genomic elements among elongated RNA-containing plant viruses
    • Morozov, S. Yu., Dolja, V. V., and Atabekov, J. G. (1989). Probable reassortment of genomic elements among elongated RNA-containing plant viruses. J. Mol. Evol. 29, 52-62.
    • (1989) J. Mol. Evol. , vol.29 , pp. 52-62
    • Morozov, S.Yu.1    Dolja, V.V.2    Atabekov, J.G.3
  • 36
    • 0025226111 scopus 로고
    • Mutational analysis of barley stripe mosaic virus RNAβ
    • Petty, I. T. D., and Jackson, A. O. (1990). Mutational analysis of barley stripe mosaic virus RNAβ. Virology 179, 712-718.
    • (1990) Virology , vol.179 , pp. 712-718
    • Petty, I.T.D.1    Jackson, A.O.2
  • 37
    • 0025011806 scopus 로고
    • Identification of barley stripe mosaic virus genes involved in viral RNA replication and systemic movement
    • Petty, I. T. D., French, R., Jones, R. W., and Jackson, A. O. (1990a). Identification of barley stripe mosaic virus genes involved in viral RNA replication and systemic movement. EMBO J. 9, 3453-3457.
    • (1990) EMBO J. , vol.9 , pp. 3453-3457
    • Petty, I.T.D.1    French, R.2    Jones, R.W.3    Jackson, A.O.4
  • 38
    • 0025242647 scopus 로고
    • Systemic movement of an RNA plant virus determined by a point substitution in a 5′ leader sequence
    • Petty, I. T. D., Edwards, M. C., and Jackson, A. O. (1990b). Systemic movement of an RNA plant virus determined by a point substitution in a 5′ leader sequence. Proc. Natl. Acad. Sci. USA 87, 8894-8897.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 8894-8897
    • Petty, I.T.D.1    Edwards, M.C.2    Jackson, A.O.3
  • 39
    • 0002683712 scopus 로고
    • The spatial folding of the 3′ non-coding region of aminoacylatable plant viral RNAs
    • (M. A. Brinton and R. R. Ruekert, Eds.). A. R. Liss, New York
    • Pleij, C. W. A., Abrahams, J. P., Van Belkum, A., Rietveld, K., and Bosch, L. (1987). The spatial folding of the 3′ non-coding region of aminoacylatable plant viral RNAs. In "Positive Strand RNA Viruses" (M. A. Brinton and R. R. Ruekert, Eds.), pp. 299-316. A. R. Liss, New York.
    • (1987) Positive Strand RNA Viruses , pp. 299-316
    • Pleij, C.W.A.1    Abrahams, J.P.2    Van Belkum, A.3    Rietveld, K.4    Bosch, L.5
  • 40
    • 0025326339 scopus 로고
    • Nicotiana velutina mosaic virus: Evidence for a bipartite genome comprising 3 kb and 8 kb RNAs
    • Randles, J. W., and Ronde, W. (1990). Nicotiana velutina mosaic virus: Evidence for a bipartite genome comprising 3 kb and 8 kb RNAs. J. Gen. Virol. 71, 1019-1027.
    • (1990) J. Gen. Virol. , vol.71 , pp. 1019-1027
    • Randles, J.W.1    Ronde, W.2
  • 41
    • 0023059178 scopus 로고
    • A conformational preference parameter to predict helixes in integral membrane proteins
    • Rao, M. J. K., and Argos, P. (1986). A conformational preference parameter to predict helixes in integral membrane proteins. Biochim. Bophys. Acta 869, 197-214.
    • (1986) Biochim. Bophys. Acta , vol.869 , pp. 197-214
    • Rao, M.J.K.1    Argos, P.2
  • 42
    • 0001626807 scopus 로고
    • Mapping functions on the multipartite genome of beet necrotic yellow vein virus
    • Richards, K. E., and Tamada, T. (1992). Mapping functions on the multipartite genome of beet necrotic yellow vein virus. Annu. Rev. Phytopathol. 30, 291-313.
    • (1992) Annu. Rev. Phytopathol. , vol.30 , pp. 291-313
    • Richards, K.E.1    Tamada, T.2
  • 43
    • 0027990470 scopus 로고
    • Purification, properties, and subcellular location of foxtail mosaic potexvirus 26-kDa protein
    • Rouleau, M., Smith, R. J., Bancroft, J. B., and Mackie, G. A. (1994). Purification, properties, and subcellular location of foxtail mosaic potexvirus 26-kDa protein. Virology 204, 254-265.
    • (1994) Virology , vol.204 , pp. 254-265
    • Rouleau, M.1    Smith, R.J.2    Bancroft, J.B.3    Mackie, G.A.4
  • 44
    • 0024706286 scopus 로고
    • Partial nucleotide sequence of potato virus M RNA shows similarities to potexviruses in gene arrangement and the encoded amino acid sequence
    • Rupasov, V. V., Morozov, S. Yu., Kanyuka, K. V., and Zavriev, S. K. (1989). Partial nucleotide sequence of potato virus M RNA shows similarities to potexviruses in gene arrangement and the encoded amino acid sequence. J. Gen. Virol. 70, 1861-1869.
    • (1989) J. Gen. Virol. , vol.70 , pp. 1861-1869
    • Rupasov, V.V.1    Morozov, S.Yu.2    Kanyuka, K.V.3    Zavriev, S.K.4
  • 45
    • 0027170919 scopus 로고
    • Complete nucleotide sequence and organization of bipartite RNA genome of soil-borne wheat mosaic virus
    • Shirako, Y., and Wilson, T. M. A. (1993). Complete nucleotide sequence and organization of bipartite RNA genome of soil-borne wheat mosaic virus. Virology 195, 16-32.
    • (1993) Virology , vol.195 , pp. 16-32
    • Shirako, Y.1    Wilson, T.M.A.2
  • 46
    • 0027264995 scopus 로고
    • Predicting the topology of eucaryotic membrane proteins
    • Sipos, L., and Von Heijne, G. (1993). Predicting the topology of eucaryotic membrane proteins. Eur. J. Biochem. 213, 1333-1340.
    • (1993) Eur. J. Biochem. , vol.213 , pp. 1333-1340
    • Sipos, L.1    Von Heijne, G.2
  • 48
    • 0023928974 scopus 로고
    • Transcending the impenetrable: How proteins come to terms with membranes
    • Von Heijne, G. (1988). Transcending the impenetrable: How proteins come to terms with membranes. Biochim. Bophys. Acta 947, 307-333.
    • (1988) Biochim. Bophys. Acta , vol.947 , pp. 307-333
    • Von Heijne, G.1
  • 49
    • 0028179377 scopus 로고
    • Evidence that the αa gene of barley stripe mosaic virus encodes determinants of pathogenicity to oat (Avena sativa)
    • Weiland, J. J., and Edwards, M. C. (1994). Evidence that the αa gene of barley stripe mosaic virus encodes determinants of pathogenicity to oat (Avena sativa). Virology 201, 116-126.
    • (1994) Virology , vol.201 , pp. 116-126
    • Weiland, J.J.1    Edwards, M.C.2
  • 50
    • 0028054442 scopus 로고
    • The coat protein of Indian peanut clump virus: Relationships with other furoviruses and with barley stripe mosaic virus
    • Wesley, S. V., Mayo, M. A., Jolly, C. A., Naidu, R. A., Reddy, D. V. R., Jana, M. K., and Parnaik, V. K. (1994). The coat protein of Indian peanut clump virus: Relationships with other furoviruses and with barley stripe mosaic virus. Arch. Virol. 134, 271-278.
    • (1994) Arch. Virol. , vol.134 , pp. 271-278
    • Wesley, S.V.1    Mayo, M.A.2    Jolly, C.A.3    Naidu, R.A.4    Reddy, D.V.R.5    Jana, M.K.6    Parnaik, V.K.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.