Proposal for a new distributed database of macromolecular and subcellular structures from different areas of microscopy

Journal of Structural Biology

Volumn 116, Issue 1, 1996, Pages 161-166

  Marabini, R ^a   Vaquerizo, C ^a   Fernandez J J ^a   Carazo, J M ^a   Engel, A ^b   Frank, J ^c,d  

^a UNIVERSIDAD AUTÓNOMA DE MADRID   (Spain)

^b UNIVERSITY OF BASEL   (Switzerland)

^c WADSWORTH CENTER   (United States)

^d STATE UNIVERSITY OF NEW YORK   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CHEMICAL STRUCTURE; DATA BASE; IMAGE ANALYSIS; MACROMOLECULE; MICROSCOPY; PRIORITY JOURNAL; SHORT SURVEY;

EID: 0029885693     PISSN: 10478477     EISSN: None     Source Type: Journal    
DOI: 10.1006/jsbi.1996.0026     Document Type: Article

References (14)

1. Bernstein, F. C., Koetzle, T. F., Williams, G. J. B., Meyer, E. F. Jr., Brice, M. D., Rodgers, J. R., Kennard, O., Shimanouchi, T., and Tasumi, M. (1977) The Protein Data Bank: A computer-based archival file for macromolecular structures. J. Mol. Biol. 112, 535-542.
2. Boisset, N., Penczek, P., Taveau, J. C., Lamy, J., and Frank, J. (1995) Three-dimensional reconstruction of Androctonus australis hemocyanin labeled with a monoclonal Fab fragment, J. Struct. Biol. 115, 16-29.
3. Bremer, A., Henn, C., Goldie, K. N., Engel, A., Smith, P. R., and Aebi, U. (1994) Towards atomic interpretation of F-actin filament three-dimensional reconstruction, J. Mol. Biol. 242, 683-700.
4. Carazo, J. M., Marabini, R., Vaquerizo, C., and Frank, J. (1994) Towards a Data-Bank of Three-Dimensional Macromolecular Structures: A WWW-Based Prototype, ICEM 13 - Paris, ed. les Editios de Physique, Proc. 13th International Congress on Electron Microscopy, Vol. 1, pp. 519-520.
5. Etzold, T., and Argos, P. (1993) SRS - An Indexing and Retrieval Tool for Flat File Data Libraries, CABIOS 9, 49-57.
6. Frank, J., Zhu, J., Penczek, P., Li, Y., Srivastava, S., Verschoor, A., Radermacher, M., Grassucci, R., Lata, R. K., and Agrawal, R. K. (1995) A model of protein synthesis based on cryo-electron microscopy of the E. coli ribosome, Nature 376, 441-444.
7. Henn, C., Teschner, M., Engel, A., and Aebi, U. (1996) Real-time isocontouring and texture-mapping meet new challenges in interactive molecular graphics applications, J. Struct. Biol. 116, 86-92.
8. Marabini, R., Vaquerizo, C., Fernández, J. J., Carazo, J. M., Ladjadj, M., Odesanya, O., and Frank, J. (1994) On a prototype for a new distributed data base of volume data, in Robb, R. A. (Ed.), Visualization in Biomedical Computing '94, Proc. SPIE pp. 466-472, 2329.
9. NCSA HDF Calling Interfaces and Utilities, Version 3.0, National Center for Super Computing Applications, Univ. of Illinois at Urbana-Champaign, Nov. 1989.
10. Obraczka, K., Danzig, P. B., and Li, S.-H. (1993) Internet resource discovery services, IEEE Computer 26(9), 8-22.
11. Rayment, I., Holden, H. M., Whittaker, M., Yohn, C. B., Lorenz, M., Holmes, K. C., and Milligan, R. A. (1993) Structure of the actin-myosin complex and its implications for muscle contraction, Science 261, 58-65.
12. San Martín, C., Stamford, N. P., Dammerova, N., Dixon, N., and Carazo, J. M. (1995) A structural model for the Escherichia coli DnaB helicase based on electron microscopy data, J. Struc. Biol. 114(3), 167-176.
13. Schabert, F. A., Henn, C., and Engel, A. (1995) Native Escheria coli OmpF porin surfaces probed by atomic force microscopy, Science 268, 92-94.
14. Stewart, P. L., Fuller, S. D., and Burnett, R. M. (1993) Difference imaging of adenovirus: Bridging the resolution gap between X-ray crystallography and electron microscopy, EMBO J. 12, 2589-2599.