The use of non-uniform deuterium labelling ['NMR-window'] to study the NMR structure of a 21 mer RNA hairpin

Nucleic Acids Research

Volumn 24, Issue 7, 1996, Pages 1187-1194

  Foldesi A ^a   Yamakage, S I ^a   Nilsson, F P R ^a   Maltseva, T V ^a   Chattopadhyaya, J ^a  

^a UPPSALA UNIVERSITY   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

AROMATIC COMPOUND; DEUTERIUM; PROTON; SUGAR;

ARTICLE; NUCLEAR MAGNETIC RESONANCE; PRIORITY JOURNAL; RNA STRUCTURE;

DEUTERIUM; HYDROGEN BONDING; MAGNETIC RESONANCE SPECTROSCOPY; NUCLEIC ACID CONFORMATION; OLIGORIBONUCLEOTIDES;

EID: 0029881044     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/24.7.1187     Document Type: Article

References (33)

1. Wüthrich, K. (1986) NMR of Proteins and Nucleic Acids. Wiley, New York.
2. Aboul-ela, F. and Varani, G. (1995) Curr. Opin. Biotechnol., 6, 89-95.
3. Dieckmann, T. and Feigon, J. (1994) Curr. Opin. Struct. Biol., 4, 745-749.
4. Moore, P. B. (1995) Acc. Chem Res., 28, 251-256.
5. Földesi, A., Nilson, F. P. R., Glemarec, C., Gioeli, C. and Chattopadhyaya, J. (1992) Tetrahedron, 48, 9033-9072.
6. Földesi, A., Nilson, F. P. R., Glemarec, C., Gioeh, C. and Chattopadhyaya, J. (1993) J. Biochem. Biophys. Methods, 26, 1-26.
7. Yamakage, S.-I., Maltseva, T. V., Nilson, F. P., Földesi, A and Chattopadhyaya, J. (1993) Nucleic Acids Res., 21, 5005-5011.
8. Agback, P., Maltseva, T. V., Yamakage, S.-I., Nilson, F P. R., Földesi, A. and Chattopadhyaya, J. (1994) Nucleic Acids Res., 22, 1404-1412.
9. Földesi, A., Yamakage, S.-I., Maltseva, T. V , Nilson, F. P., Agback, P. and Chattopadhyaya, J. (1995) Tetrahedron, 51, 10065-10092.
10. Westman, E. and Strömberg, R. (1994) Nucleic Acids Res., 22, 2430-2431.
11. Markiewicz, W. T. (1979) J. Chem. Res. (M). 181-196.
12. Lyttle, M. H., Wright, P. B., Sinha, N. D., Bain, J. D. and Chamberlin, A. R. (1991) J. Org. Chem., 56, 4608-4615.
13. Rabi, J. A. and Fox, J. J. (1973) J. Am. Chem. Soc., 95, 1628-1632.
14. Zhou, X.-X., Welch, C. J. and Chattopadhyaya, J. (1986) Acta Chem. Scand., B40, 806-816.
15. Ti, G. S., Gaffney, B. L. and Jones, R. A. (1982) J. Am. Chem. Soc., 104, 1316-1319.
16. Wu, T. and Ogilvie, K. K. (1987) Tetrahedron Lett., 29, 4249-4252.
17. Hakimelahi, G. H., Proba, Z. A. and Ogilvie, K. K. (1982) Can. J. Chem., 60, 1106-1113.
18. Beaucage, S. L. and Caruthers, M H. (1981) Tetrahedron Lett., 22, 1859-1862.
19. Sinha, N D., Biemat, J. and Köster, H. (1983) Tetrahedron Lett., 24, 5843-5846.
20. Usman, N., Ogilvie, K. K., Jiang, M.-Y. and Cedergren, R. J. (1987) J. Am. Chem. Soc., 109, 7845-7854.
21. Gasparutto, D., Livache, T., Bazin, H., Duplaa, A.-M., Guy, A., Khorlin, A., Molko, D., Roget, A. and Téoule, R. (1992) Nucleic Acids Res., 20. 5159-5166.
22. Bodenhausen, G., Kogler, H. and Ernst, R. R. (1984) J. Magn. Reson., 580, 370-383.
23. Neuhaus, D., Wagner, G., Vasak, M., Kagi, J. H. R. and Wuthrich, K. (1985) Eur. J. Biochem., 151, 257-273.
24. Maltseva, T. V., Agback, P. and Chattopadhyaya, J. (1993) Nucleic Acids Res., 21, 4246-4252.
25. Ramesh, V. (1993) Nucleic Acids Res., 21, 5485-5488.
26. Varani, V. and Tinoco, I. (1991) Q. Rev. Biophys., 24, 479-532.
27. Heller, S. R. (1968) Biochem. Biophys. Res. Commun., 32, 998-1001.
28. Wataya, Y. and Hayatsu, H. (1972) J. Am. Chem. Soc , 94, 8927-8928.
29. 2H enrichment was only achieved.
30. Puglisi, J. D., Wyatt, J. R. and Tinoco, I. Jr. (1990) J. Mol. Biol., 214, 437-453.
31. White, S. A., Nilges, M., Huang, A., Brünger, A. T. and Moore, P. B. (1992) Biochemistry, 31, 1610-1621.
32. Heus, H. A. and Pardi, A. (1991) J. Am. Chem. Soc., 113, 4360-4361.
33. Allain, F. H.-T. and Varani, G. (1995) J. Mol. Biol., 250, 333-353.