DNA representation of variegating heterochromatic P-element inserts in diploid and polytene tissues of Drosophila melanogaster

Chromosoma

Volumn 104, Issue 7, 1996, Pages 519-527

  Wallrath, Lori L ^a,c   Guntur, Vamsi P ^a   Rosman, Lisa E ^a,b   Elgin, Sarah C R ^a  

^a WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b UNIVERSITY OF CHICAGO   (United States)

^c WASHINGTON UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL TISSUE; ARTICLE; CELL TRANSFORMATION; CONTROLLED STUDY; DIPLOIDY; DNA SEQUENCE; DROSOPHILA MELANOGASTER; GENE EXPRESSION; GENE INSERTION; HETEROCHROMATIN; NONHUMAN; POLYTENE CHROMOSOME; SOUTHERN BLOTTING; TELOMERE; TRANSGENE;

ANIMALS; ATP-BINDING CASSETTE TRANSPORTERS; CELL LINE; CHROMATIN; DIPLOIDY; DNA TRANSPOSABLE ELEMENTS; DROSOPHILA MELANOGASTER; DROSOPHILA PROTEINS; EUCHROMATIN; EYE COLOR; EYE PROTEINS; FEMALE; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENES, INSECT; HEAT-SHOCK PROTEINS; HETEROCHROMATIN; HSP70 HEAT-SHOCK PROTEINS; INSECT HORMONES; LARVA; MALE; MOSAICISM; MUTAGENESIS, INSERTIONAL; SALIVARY GLANDS; TELOMERE;

EID: 0029877356     PISSN: 00095915     EISSN: None     Source Type: Journal    
DOI: 10.1007/s004120050144     Document Type: Article

References (60)

1. Ananiev EV, Gvozdev VA (1974) Changed pattern of transcription and replication in polytene chromosomes of Drosophila melanogaster resulting from eu-heterochromatin rearrangement. Chromosoma 45:173-191
2. Aparicio OM, Gottschling DE (1994) Overcoming telomeric silencing: a trans-activator competes to establish gene expression in a cell cycle-dependent way. Genes Dev 8:1133-1146
3. Baker BS, German M, Marin I (1994) Dosage compensation in Drosophila. Annu Rev Genet 28:491-521
4. Belyaeva'ES, Zhimulev IF (1991) Cytogenetic and molecular aspects of position effect variegation in Drosophila III. Continuous and discontinuous compaction of chromosomal material as a result of position effect variegation. Chromosoma 100:453-466
5. Belyaeva ES, Demakova OV, Umbetova GH, Zhimulev IF (1993) Cytogenetic and molecular aspects of position-effect variegation in Drosophila melanogaster V. Heterochromatin-associated protein HP1 appears in euchromatic chromosomal regions that are inactivated as a result of position-effect variegation. Chromosoma 102:583-590
6. Bender W, Spierer P, Hogness DS (1983) Chromosomal walking and jumping to isolate DNA from the Ace and rosy loci and the bithorax complex in Drosophila melanogaster. J Mol Biol 168:17-33
7. Bishop CP (1992) Evidence for intrinsic differences in the formation of chromatin domains in Drosophila melanogaster. Genetics 132:1063-1069
8. Danilevskaya O, Lofsky A, Kurenova E, Pardue M-L (1993) The Y chromosome of Drosophila melanogaster contains a distinctive subclass of Het-A-related repeats. Genetics 134:531-543
9. Di Franco C, Pisano C, Dimitri P, Gigliotti S, Junakovic N (1989) Genomic distribution of copia-like transposable elements in somatic tissues and during development of Drosophila melanogaster. Chromosoma 98:402-410
10. Feinberg AP, Vogelstein B (1984) A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 137:266-267
11. Gall JC, Cohen EH, Polan ML (1971) Repetitive DNA sequences in Drosophila. Chromosoma 33:319-344
12. Glaser RL, Spradling AC (1994) Unusual properties of genomic DNA molecules spanning the euchromatic-heterochromatic junction of a Drosophila minichromosome. Nucleic Acids Res 22:5068-5075
13. Glaser RL. Karpen GH, Spradling AC (19929 Replication forks are not found in a Drosophila minichromosome demonstrating a gradient of polytenization. Chromosoma 102:15-19
14. Hartmann-Goldstein IJ, Cowell JK (1976) Position effect on the DNA content of chromosome regions in Drosophila. In: Jones K, Brandham PE (eds) Current chromosome research. Elsevier/North Holland Biomedical Press, pp 43-50
15. Hayashi S, Ruddell A, Sinclair D, Grigliatti T (1990) Chromosomal structure is altered by mutations that suppress or enhance position effect variegation. Chromosoma 99:391-400
16. Hazelrigg T, Levis R, Rubin GM (1984) Transformation of white locus DNA in Drosophila: dosage compensation, zeste interaction, and position effects. Cell 36:469-481
17. Heitz E (1928) Das heterochromatin der moose. Jahrb Wiss Bot 69:381-393
18. Henikoff S (1981) Position-effect variegation and chromosome structure of a heat shock puff in Drosophila. Chromosoma 83:381-393
19. Henikoff S (1990) Position-effect variegation after 60 years. Trends Genet 6:422-426
20. Hochman B (1973) Analysis of a whole chromosome in Drosophila. Cold Spring Harbor Symp Quant Biol 38:581-589
21. Howe M, Dimitri P, Berloco M, Wakimoto BT (1995) Cis-eftects of heterochromatin on heterochromatic and euchromatic gene activity in Drosophila melanogaster. Genetics 140:1033-1045
22. Karpen GH (1994) Position-effect variegation and the new biology of heterochromatin. Curr Opin Genet Dev 4:281-291
23. Karpen GH, Spradling AC (1990) Reduced DNA polytenization of a minichromosome region undergoing position-effect variegation in Drosophila. Cell 63:97-197
24. Karpen GH, Spradling AC (1992) Analysis of subtelomeric helerochromatin in the Drosophila minichromosome Dp1187 by single P element insertional mutagenesis. Genetics 132:737-753
25. Kornher JS, Kauffman SA (1986) Variegated expression of the Sgs-4 locus in Drosophila melanogaster. Chromosoma 94:205-216
26. Kubota S, Kuro-o M, Mizuno S, Kohno S (1993) Germ line-restricted, highly repeated DNA sequences and their chromosomal localization in Japanese hagfish (Eptatretus okinoseanus). Chromosoma 102:163-173
27. Kyrion GK, Liu K, Liu C, Lustig AJ (1993) RAP1 and telomere structure regulate telomere position effects in Saccharomyces cervisieae. Genes Dev 7:1146-1159
28. Laird CD (1973) DNA of Drosophila chromosomes. Annu Rev Genet 7:177-204
29. Lewis EB (1950) The phenomenon of position effect. Adv Genet 3:73-15
30. Lohe AR, Hilliker AJ, Roberts PA (1993) Mapping simple repeated DNa sequences in heterochromatin of Drosophila melanogaster. Genetics 134:1149-1174
31. n repeats is critical for the formation of the DNase I hypersensitive sites in the Drosophila melanogaster gene. J Mol Biol 225:985-998
32. Meyer GF, Lipps HJ (1981) The formation of polytene chromosomes during macronuclear development of the hypotrichous ciliate Stylonychia mytilus. Chromosoma 82:309-314
33. Miklos GLG, Cotsell JN (1990) Chromosome structure at interfaces between major chromatin types: alpha- and beta-heterochromatin. BioEssays 12:1-6
34. Muller HJ (1930) Types of visible variation induced by X-rays in Drosophila. J Genet 22:299-335
35. Muller HJ (1938) The remaking of chromosomes. Collect. Net XIII: 181-195, 198
36. Nagl W (1983) Heterochromatin elimination in the orchid Dendrobium. Protoplasma 118:234-237
37. Nimmo ER, Cranston G, Allshire FC (1994) Telomere-associated chromosome breakage in fission yeast results in variegated expression of adjacent genes. EMBO J 13:3801-3811
38. Pardue M-L (1995) Drosophila telomeres: another way to end it all. In: Blackburn EH, Greider CW (eds) Telomeres. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, pp 339-370
39. Pimpinelli S, Santmi G, Gatti M (1976) Characterization of Drosophila heterochromatin. II. C- and N-banding. Chromosoma 57:377-386
40. Renauld H, Aparicio OM, Zierath PD, Bilington BL, Chhablani SK, Gotischling DE (1983) Silent domains are assembled continuously from the telomere and are defined by promoter distance and strength, and by SIR3 dosage. Genes Dev 7:1133-1145
41. Roberts PA (1972) A possible case of position effect on DNA replication in Drosophila melanogaster. Genetics 72:607-614
42. Robertson HM, Preston CR, Phillis RW, Johnson-Schultz DM, Benz WK, Engles WR (1988) A stable genomic source of P element transposase in Drosophila melanogaster. Genetics 118:461-470
43. Rudkin GT (1969) Non-replicating DNA in Drosophila. Genetics [Suppl] 61:227-238
44. Rushlow CA, Bender W, Chovnick A (1984) Studies on the mechanism of heterochromatic position effect at the rosy locus of Drosophila melanogaster. Genetics 108:603-615
45. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory, Press Cold Spring Harbor, New York
46. Schultz J (1936) Variegation in Drosophila and the inert chromosome regions. Proc Natl Acad Sci USA 22:27-33
47. Shaffer DC, Wuller JM, Elgin SCR (1994) Raising large quantities of Drosophila embryos for biochemical experiments. Methods Cell Biol 44:99-108
48. Spofford JB (1976) Position-effect variegation in Drosophila. In: Ashburner M, Novitski E (eds) The genetics and biology of Drosophila, vol 1. Academic Press, New York, pp 955-1018
49. Spradling AC (1993) Position effect variegation and genomic instability. Cold Spring Harbor Symp Quant Biol LVIII:585-596
50. Spradling AC, Karpen GH (1990) Sixty years of mystery. Genetics 126:779-784
51. Tobler H, Etter A, Müller F (1992) Chromatin diminution in nematode development. Trends Genet 8:427-432
52. Traverse KL, Pardue ML (1989) Studies of He-T DNA sequences in the pericentric regions of Drosophila chromosomes. Chromosoma 97:261-271
53. Umbetova GH, Belyaeva ES, Baricheva EM, Zhimulev IF (1991) Cytogenetic and molecular aspects of position effect variegation in Drosophila melanogaster. IV. Underreplication of chromosomal material as a result of gene inactivation. Chromosoma 101:56-61
54. Valgeirsdottir K, Traverse KL, Pardue ML (1990) HeT DNA: A family of mosaic repeated sequences specific for heterochromatin in Drosophila melanogaster. Proc Natl Acad Sci USA 87:7998-8002
55. Wakimoto BT, Hearn MG (1990) The effects of chromosome rearrangements on the expression of heterochromatic genes in chromosome 2L of Drosophila melanogaster. Genetics 125:141-154
56. Wallrath LL, Elgin SCR (1995) Position effect variegation in Drosophila is associated with an altered chromatin structure. Genes Dev 9:1263-1277
57. Weiler KS, Wakimoto BT (1995) Heterochromatin and gene expression in Drosophila. Annu Rev Genet 29:577-605
58. Zhang P, Spradling AC (1995) The Drosophila salivary gland chromocenter contains highly polytenized subdomains of mitotic heterochromatin. Genetics 139:659-667
59. var7. Chromosoma 94:492-504
60. var7 chromosome in males. Chromosoma 96:255-261