Anaerobes response to oxygen: The sulfate-reducing bacteria

Anaerobe

Volumn 2, Issue 1, 1996, Pages 1-9

  Le Gall, Jean ^a,b   Xavier, Antonio V ^a  

^a INSTITUTO DE TECNOLOGIA QUÍMICA E BIOLÓGICA   (Portugal)

^b University of Georgia ^*  (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANAEROBIC BACTERIUM; BACTERIUM IDENTIFICATION; BIOCHEMISTRY; NONHUMAN; OXYGEN CONSUMPTION; PRIORITY JOURNAL; REVIEW; SULFATE REDUCING BACTERIUM;

BACTERIA (MICROORGANISMS);

EID: 0029869132     PISSN: 10759964     EISSN: None     Source Type: Journal    
DOI: 10.1006/anae.1996.0001     Document Type: Review

References (60)

1. Sebald M. and Hauser D. (1995) Pasteur, oxygen and the anaerobes revisited. Anaerobe, 1: 11-16
2. Beijerinck M.W. (1895) Uber Spirillum desulfuricans als Ursache von Sulfatereduction. Zentbl. Bakt. Parasitkde (abs. 2), 1st Edn., pp. 1-9, 45-59, 104-114
3. Ghose T.K. (1964) Introduction to formal discussion. In Pearson E.A., (ed.) Advances in Water Pollution Research, 3rd Edn., pp. 295-298. Pergamon Press, Oxford
4. Baars J.K. (1930) Over Sulfaatreductive door Bacterien. Thesis, Delft, 164 p
5. Stackebrandt E., Stahl D.A. and Devereux R. (1995) Taxonomic relationships. In Barton L.L., (ed.) Sulphate-Reducing Bacteria. (Vol. 8) pp. 49-87. Plenum Press, New York
6. Hansen T.A. (1994) Metabolism of sulfate-reducing prokaryotes. Antonie van Leeuvenhoek, 66: 165-185
7. Pasteur L. (1861) Animalcules infusoires vivant sans gaz oxigène libre et déterminant des fermentations. Compt. Rendus Acad. Sci. Paris, L II: 344-347
8. Postgate J.R. (1984) The sulphate-reducing bacteria, 2nd Edn, p.208 Cambridge University Press, Cambridge
9. Dilling W. and Cypionka H. (1990) Aerobic respiration in sulfate-reducing bacteria. FEMS Microbiol. Lett. 71: 123-128
10. Le Gall J. and Fauque G. (1988) Dissimilatory reduction of sulfur compounds. In Zehnder A.J.B. (ed.) Biology and Anaerobic Microorganisms (Chapter 11) pp. 587-639. John Wiley & Sons, New York
11. Hamilton W.A. and Lee W. (1995) Biocorrosion. In Barton L.L. (ed.) Sulphate-reducing Bacteria. 8, pp. 243-264. Plenum Press, New York and London
12. Barton L.L., Le Gall J. and Peck H.D., Jr. (1970) Phosphorylation coupled to oxidation of hydrogen with fumarate in extracts of the sulfate-reducing bacterium D. gigas. Biochem. Biophys. Res. Comm., 41: 1036-1042
13. Barton L.L., Le Gall J., Odom J.M. and Peck H.D., Jr. (1983) Energy coupling to Nitrate Respiration in the Sulfate-reducing Bacterium, Desulfovibrio gigas. J. Bacteriol. 154: 867-871
14. Costa C., Macedo A., Moura I., Moura J.J.G., Le Gall J., Berlier Y., Liu M.-Y. and Payne W.J. (1990) Regulation of the hexaheme nitrite/nitric oxide reductase of Desulfovibrio desulfuricans, Wolinella succinogenes and Escherichia coli. A mass spectrometry study. FEBS Lett. 276: 67-70
15. Le Gall J., Liu M.-Y. and Payne W.J. (1991) Denitrification, Ammonification: an overview with a special emphasis on the structure and function of nitrite reductases. Wang H.H. (ed.) Proc. Symp. on Pig Wastes Treatment and Composing II, pp. 1-18. B.E.S.C. Taipei, Taiwan
16. Brèdt D.S., Hwang P.M., Glatt C.E., Lowenstein C., Reed R.R. and Snyder S.H. (1991) Cloned and expressed nitric oxide synthase structurally resembles cytochrome P-450 reductase. Nature 351: 714-718
17. Watenpaugh K.D., Sieker L.C., Jensen L.H., Le Gall J. and Dubourdieu M. (1972) Structure on the oxidized form of a flavodoxin at 2.5 A resolution. Proc. Natl. Acad. Sci., 69: 3185-3188
18. Nathan C. and Xie Q.-W. (1994) Regulation of biosynthesis of nitric oxide. J. Biol. Chem. 269: 13725-13728
19. Chen L., Liu M.-Y. and Le Gall J. (1991) Calcium is required for the reduction of sulfite from hydrogen in a reconstituted electron transfer chain from the sulfate-reducing bacterium Desulfovibrio gigas. Biophys. Biochem. Res. Comm. 180: 238-242
20. Bray R.C., Turner N.A., Le Gall J., Barata B. and Moura J.J.G. (1991) Information from EPR spectroscopy on the iron-sulphur centers of the iron-molybdenum protein (aldehyde dehydrogenase) of Desulfovibrio gigas. Biochem. J. 280: 817-820
21. Thoenes V., Flores O.L., Neves A., Devreese B., Van Beeumen J.F., Huber R., Romão M.J., Le Gall J., Moura J.J.G. and Rodrigues-Pousada C. (1994) Molecular cloning and sequence analysis of the gene of the molybdenum-containing aldehyde oxido-reductase. The deduced amino-acid sequence shows similarity to xanthine dehydrogenase. Eur. J. Biochem. 220: 901-910
22. Romão M.J., Silva M., Moura I., Moura J.J.G., Le Gall J., Engh R., Schneider M., Hof P. and Huber R. (1995) The crystal and molecular structure at 2.25 Å resolution of the aldehyde oxidor-eductase from Desulfovibrio gigas, a member of the xanthine oxidase protein family containing molybdopterin and iron sulfur cofactors. Science, in press
23. Peck H.D., Jr. (1966) Phosphorylation coupled with electron transfer in extracts of the sulfate-reducing bacterium. Desulfovibrio gigas. Biochem. Biophys. Res. Comm. 22: 112-118
24. 3 from Desulfovibrio vulgaris - A model for energy transduction mechanisms. JBIC, in press
25. Hata Y., Kadota H., Miyoshi H. and Kimata M. (1964) Microbial production of sulfides in polluted coastal and estuarine regions. In Pearson E.A. (ed.) Advances in Water Pollution Research, 3rd Edn. pp. 287-295. Pergamon Press, Oxford
26. Novozhilova M.I. and Berezina F.S. (1968) Character of the distribution of sulfate-reducing and sulfur bacteria in the sediments of lake Balkhash. Mikrobiologiya, 37: 534-539
27. Hardy J.A. and Hamilton W.A. (1981) The oxygen tolerance of sulfate-reducing bacteria isolated from north sea waters. Current Microbiology, 6: 259-262
28. Bell G.R. and Le Gall J. (1971) The catalase of the sulfate-reducing obligate anaerobe Desulfovibrio. Bacteriol. Proc., p.263, ASM Meeting, Minneapolis, USA
29. Bell G.R. (1973) Studies on electron transfer systems in Desulfovibrio: purification and characterization of hydrogenase, catalase and superoxide dismutase. Ph.D. thesis, The University of Georgia, Athens, Georgia, USA
30. Hewitt J. and Morris J.G. (1975) Superoxide dimutase in some obligatory anaerobic bacteria. FEES Lett. 50: 315-318
31. Hatchikian E.C., Le Gall J., and Bell G.R. (1977) Significance of superoxide dismutase and catalase activities in the strict anaerobes, sulfate-reducing bacteria. In Michelson A.M., McCord J.M. and Fridovich I. (ed.), Superoxide and Superoxide dismutase. Academic Press, London
32. Abdollahi I. and Wimpenny J.W.T. (1990) Effect of oxygen on the growth of Desulfovibrio desulfuricans. J. Gen. Microbiol. 136: 1025-1030
33. Devereux R., He S.-H., Doyle C.L., Orkland S., Stahl D.A., Le Gall J. and Whitman W.B. (1990) Diversity and origin of Desulfovibrio species: phylogenetic definition of a family. J. Bacteriol. 172: 3609-3619
34. Marschall C., Frenzel P. and Cypionka H. (1993) Influence of oxygen on sulfate reduction and growth of sulfate-reducing bacteria. Arch. Microbiol., 159: 168-173
35. Le Gall J. (1968) Purification partielle et étude de la NAD:rubredoxine oxydoréductase de D. gigas. Ann. Inst. Pasteur, 114: 109-115
36. Seki Y., Seki S., Satoh M., Ikeda A. and Ishimoto M. (1989) Rubredoxin from Clostridium perfringens: complete amino acid sequence and participation in nitrate reduction. J. Biochem. 106: 336-341
37. Sieker L.C., Stenkamp R.E. and Le Gall J. (1994) Rubredoxin in Crystalline State. In Peck H.D., Jr. and Le Gall J. (ed.) Inorganic Microbial Sulfur Metabolism. Methods in Enzymology 243: pp. 203-216. Academic Press, San Diego
38. Archer M., Huber R., Tavares P., Moura I., Moura J.J.G., Carrondo M.A., Sieker L.C., Le Gall J. and Romão M.J. (1995) Crystal structure of desulforedoxin from Desulfovibrio gigas determined at 1.8 A resolution: a novel non-heme iron protein structure. J. Mol Biol., 251: 690-702
39. Chen L., Liu M.-Y., Le Gall J., Fareleira P., Santos H. and Xavier A.V. (1993) Purification and characterization of an NADH-rubredoxin oxidoreductase involved in the utilization of oxygen by Desulfovibrio gigas. Eur. J. Biochem., 216: 443-448
40. Santos H., Fareleira P., Xavier A.V., Chen L., Lui M.-Y. and Le Gall J. (1995) Aerobic metabolism of carbon reserves by the 'obligate anaerobe' Desulfovibrio gigas. Biochem. Biophys. Res. Comm., 195: 551-557
41. Chen L., Liu M.-Y., Le Gall J., Fareleira P., Santos H. and Xavier A.V. (1993) Rubredoxin oxidase, a new flavo-hemo-protein, is the site of oxygen reduction to water by the 'strict anaerobe' Desulfovibrio gigas. Biochem. Biophys. Res. Comm., 193: 100-105
42. Lode E.T. and Coon M.J. (1973) Role of rubredoxin in fatty acid and hydrocarbon hydroxylation reactions. In Lovenberg W. (ed.): Iron-Sulfur Proteins, vol 1, pp. 173-191. Academic Press, New York
43. Timkovich R., Burkhalter R.S., Xavier A.V., Chen L. and Le Gall J. (1994) Iron-Uroporphyrin I and a heme-c derivative are prosthetic groups in Desulfovibrio gigas rubredoxin oxidase. Bioorganic Chem., 22: 284-293
44. Stams F.J.M., Veenhuis M., Wenk G.H. and Hansen T.A. (1983) Occurrence of polyglucose as a storage polymer in Desulfovibrio species and Desulfobulbus propionicus. Arch. Microbiol., 136: 54-59
45. Kremer D.R. and Hansen T.A. (1987) Glycerol and dihydroxyacetone dissimilation in Desulfovibrio strains. Arch. Microbiol. 147: 249-256
46. Chen L., Le Gall J. and Xavier A.V. (1994) Purification, characterization and properties of an NADH oxidase from Desulfovibrio vulgaris and its coupling to adenylyl phospho-sulfate reductase. Biochem. Biophys. Res. Comm. 203: 839-844
47. Le Gall J., Prickrill B.C., Moura I., Xavier A.V., Moura J.J.G. and Huynh B.H. (1988) Isolation and characterization of rubrery-thrin, a non-heme iron protein from Desulfovibrio vulgaris that contains rubredoxin centers and a hemerythrin-like binuclear center. Biochemistry, 27: 1636-1642
48. Eggink G., Engel H., Vriend G., Terpstra P. and Witholt B. (1990) Rubredoxin reductase of Pseudomonas oleovorans, structural relationship to other flavoprotein oxidoreductases based on one NAD and two FAD fingerprints. J. Mol. Biol. 212: 135-142
49. Gupta N., Kurtz D.M., Jr., Lumppio H.L., Raui N., Wang D.L. and Huynh B.H. (1995) Structure and Redox properties of the diiron cluster in rubrerythrin. J. Inorg. Chem., 59: 360
50. O'Brien R.W. and Morris J.G. (1971) Oxygen and the growth and Metabolism of Clostridium acetobutylicum. J. Gen. Microbiol., 68: 307-318
51. Reichard P. (1993) From RNA to DNA, why so many ribonucleotide reductases? Science, 260: 1773-1777
52. Peck H.D., Jr., and Le Gall J. (eds.) (1994) Inorganic Microbial Sulfur Metabolism. Methods and Enzymology, 243: Academic Press, San Diego
53. Stams A.J.M. and Hansen T.A. (1982) Oxygen-labile L(+)lactate dehydrogenase activity in Desulfavibrio desulfuricans. FEMS Microbiol. Lett., 13: 389-394
54. Ogata M., Arihara K. and Yagi T. (1981) D-lactate dehydrogenase of Desulfovibrio vulgaris. J. Biochem., Tokyo, 89: 1423-1431
55. Fu R., Wall J.D. and Voordouw G. (1994) Dcr-A, a c-type hemecontaining methyl-accepting protein from Desulfovibrio vulgaris Hildenborough, senses the oxygen concentration or redox potential of the environment. J. Bacteriol., 176: 344-350
56. Lagunas R. (1986) Misconceptions about the energy metabolism of Saccharomyces cerevisiae. Yeast, 2: 221-228
57. Gottschalk G. (1985) Bacterial Metabolism, 2nd Edn. pp. 208-210. Springer-Verlag, New York
58. Pasteur L., L. 2: 361, 388, 430, 435; 5: 219. Oeuvres de Pasteur, collected by Pasteur Vallery-Radot (1992) Edn Masson, Paris, Vol. 7
59. Pasteur L., L. 2: 435. Oeuvres de Pasteur, collected by Pasteur Vallery-Radot (1992) Edn Masson, Paris, Vol. 7
60. Brock T.D., Madigan M.T., Martinko J.M. and Parker J. (1994) Biology of Microorganisms, 7th Edn. pp. 576-577. Prentice Hall International, Inc. New Jersey