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Volumn 12, Issue 4, 1996, Pages 391-402

Sequencing a cosmid clone of Saccharomyces cerevisiae chromosome XIV reveals 12 new open reading frames (ORFs) and an ancient duplication of six ORFs

Author keywords

DnaJ homologue; Fork head domain; Gene duplication; Ribosomal protein; Yeast

Indexed keywords

RIBOSOME PROTEIN;

EID: 0029868243     PISSN: 0749503X     EISSN: None     Source Type: Journal    
DOI: 10.1002/(SICI)1097-0061(19960330)12:4<391::AID-YEA921>3.0.CO;2-N     Document Type: Article
Times cited : (9)

References (50)
  • 2
    • 0026569763 scopus 로고
    • MAS5, a yeast homolog of dnaJ involved in mitochondrial protein import
    • Atencio, D. P. and Yaffe, M. P. (1992). MAS5, a yeast homolog of dnaJ involved in mitochondrial protein import. Mol. Cell. Biol. 12, 283-291.
    • (1992) Mol. Cell. Biol. , vol.12 , pp. 283-291
    • Atencio, D.P.1    Yaffe, M.P.2
  • 4
    • 0029068551 scopus 로고
    • The sequence of a 44,420 bp fragment located on the left arm of chromosome XIV from Saccharomyces cerevisiae
    • Berger, P., Doignon, F. and Crouzet, M. (1995). The sequence of a 44,420 bp fragment located on the left arm of chromosome XIV from Saccharomyces cerevisiae. Yeast 11, 967-974.
    • (1995) Yeast , vol.11 , pp. 967-974
    • Berger, P.1    Doignon, F.2    Crouzet, M.3
  • 5
    • 0025893384 scopus 로고
    • Characterization of the nonenzymatic chloramphenicol resistance (cmlA) gene of the In4 integron of Tn1696: Similarity of the product to transmembrane transport proteins
    • Bissonnette, L., Champetier, S., Buisson, J. P. and Roy. P. H. (1991). Characterization of the nonenzymatic chloramphenicol resistance (cmlA) gene of the In4 integron of Tn1696: similarity of the product to transmembrane transport proteins. J. Bacteriol. 173, 4493-4502.
    • (1991) J. Bacteriol. , vol.173 , pp. 4493-4502
    • Bissonnette, L.1    Champetier, S.2    Buisson, J.P.3    Roy, P.H.4
  • 6
    • 0025971921 scopus 로고
    • A homologue of the bacterial heat-shock gene dnaJ that alters protein sorting in yeast
    • Blumberg, H. and Silver, P. A. (1991). A homologue of the bacterial heat-shock gene dnaJ that alters protein sorting in yeast. Nature 349, 627-630.
    • (1991) Nature , vol.349 , pp. 627-630
    • Blumberg, H.1    Silver, P.A.2
  • 7
    • 0028215472 scopus 로고
    • Large-scale analysis of gene expression, protein localization, and gene disruption in Saccharomyces cerevisiae
    • Burns, N., Grimwade, B., Ross-Macdonald, P. B., Choi, E., Finberg, K., Roeder, G. S. and Snyder, M. (1994). Large-scale analysis of gene expression, protein localization, and gene disruption in Saccharomyces cerevisiae. Genes Dev. 8, 1087-1105.
    • (1994) Genes Dev. , vol.8 , pp. 1087-1105
    • Burns, N.1    Grimwade, B.2    Ross-Macdonald, P.B.3    Choi, E.4    Finberg, K.5    Roeder, G.S.6    Snyder, M.7
  • 8
    • 0029054927 scopus 로고
    • The nucleotide sequence of chromosome I from Saccharomyces cerevisiae
    • Bussey, H., Kaback, D. B., Zhong, W., et al. (1995). The nucleotide sequence of chromosome I from Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 92, 3809-3813.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 3809-3813
    • Bussey, H.1    Kaback, D.B.2    Zhong, W.3
  • 9
    • 0025745326 scopus 로고
    • Characterization of YDJ1: A yeast homologue of the bacterial dnaJ protein
    • Caplan, A. J. and Douglas, M. G. (1991). Characterization of YDJ1: a yeast homologue of the bacterial dnaJ protein. J. Cell. Biol. 114, 609-621.
    • (1991) J. Cell. Biol. , vol.114 , pp. 609-621
    • Caplan, A.J.1    Douglas, M.G.2
  • 10
    • 0028301199 scopus 로고
    • Complete DNA sequence of yeast chromosome XI
    • Dujon, B., Alexandraki, D., Andre, B., et al. (1994). Complete DNA sequence of yeast chromosome XI. Nature 369, 371-378.
    • (1994) Nature , vol.369 , pp. 371-378
    • Dujon, B.1    Alexandraki, D.2    Andre, B.3
  • 11
    • 0023555546 scopus 로고
    • Cosmid vectors for genomic walking and rapid restriction mapping
    • Evans, G. A. and Wahl, G. M. (1987). Cosmid vectors for genomic walking and rapid restriction mapping. Methods Enzymol. 152, 604-610.
    • (1987) Methods Enzymol. , vol.152 , pp. 604-610
    • Evans, G.A.1    Wahl, G.M.2
  • 12
    • 0028586779 scopus 로고
    • Complete DNA sequence of yeast chromosome II
    • Feldmann, H., Aigle, M., Aljinovic, G., et al. (1994). Complete DNA sequence of yeast chromosome II. EMBO J. 13, 5795-5809.
    • (1994) EMBO J. , vol.13 , pp. 5795-5809
    • Feldmann, H.1    Aigle, M.2    Aljinovic, G.3
  • 13
    • 0025764226 scopus 로고
    • Structure and evolution of a group of related aminoacyl-tRNA synthetases
    • Gatti, D. L. and Tzagoloff, A. (1991). Structure and evolution of a group of related aminoacyl-tRNA synthetases. J. Mol Biol. 218, 557-568.
    • (1991) J. Mol Biol. , vol.218 , pp. 557-568
    • Gatti, D.L.1    Tzagoloff, A.2
  • 16
    • 0028293432 scopus 로고
    • Suppression of yeast RNA polymerase III mutations by FHL1, a gene coding for a fork head protein involved in rRNA processing
    • Hermann-Ledenmatt, S., Werner, M., Sentenac, A. and Thuriaux, P. (1994). Suppression of yeast RNA polymerase III mutations by FHL1, a gene coding for a fork head protein involved in rRNA processing. Mol. Cell. Biol. 1994, 2905-2913.
    • (1994) Mol. Cell. Biol. , vol.1994 , pp. 2905-2913
    • Hermann-Ledenmatt, S.1    Werner, M.2    Sentenac, A.3    Thuriaux, P.4
  • 17
    • 0028073797 scopus 로고
    • Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII
    • Johnston, M., Andrews, S., Brinkman, R., et al. (1994). Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII. Science 265, 2077-2082.
    • (1994) Science , vol.265 , pp. 2077-2082
    • Johnston, M.1    Andrews, S.2    Brinkman, R.3
  • 18
    • 0026075934 scopus 로고
    • Cloning and characterization of a yeast homolog of the mammalian ribosomal protein L9
    • Jones, D. G. L., Reusser, U. and Baus, G. H. (1991). Cloning and characterization of a yeast homolog of the mammalian ribosomal protein L9. Nucl. Acids Res. 19, 5785-5785.
    • (1991) Nucl. Acids Res. , vol.19 , pp. 5785-5785
    • Jones, D.G.L.1    Reusser, U.2    Baus, G.H.3
  • 19
    • 0028897013 scopus 로고
    • Mutation in the silencing gene SIR4 can delay aging in S. cerevisiae
    • Kennedy, B. K., Austriaco, N. J., Zhang, J. and Guarente, L. (1995). Mutation in the silencing gene SIR4 can delay aging in S. cerevisiae. Cell 80, 485-496.
    • (1995) Cell , vol.80 , pp. 485-496
    • Kennedy, B.K.1    Austriaco, N.J.2    Zhang, J.3    Guarente, L.4
  • 20
    • 0024430850 scopus 로고
    • Cloning and nucleotide sequence of DNA mismatch repair gene PMS1 from Saccharomyces cerevisiae: Homology of PMS1 to procaryotic mutL and hexB
    • Kramer, W., Kramer, B., Williamson, M. S. and Fogel, S. (1989). Cloning and nucleotide sequence of DNA mismatch repair gene PMS1 from Saccharomyces cerevisiae: Homology of PMS1 to procaryotic mutL and hexB. J. Bacteriol. 171, 5339-5346.
    • (1989) J. Bacteriol. , vol.171 , pp. 5339-5346
    • Kramer, W.1    Kramer, B.2    Williamson, M.S.3    Fogel, S.4
  • 21
    • 0027269451 scopus 로고
    • Two yeast chromosomes are related by a fossil duplication of their centromeric regions
    • Lalo, D., Stettler, S., Mariotte, S., Slonimski, P. P. and Thuriaux, P. (1993). Two yeast chromosomes are related by a fossil duplication of their centromeric regions. C. R. Acad Sci. Paris 316, 367-373.
    • (1993) C. R. Acad Sci. Paris , vol.316 , pp. 367-373
    • Lalo, D.1    Stettler, S.2    Mariotte, S.3    Slonimski, P.P.4    Thuriaux, P.5
  • 22
    • 0024516197 scopus 로고
    • Disruption of the single tropomyosin gene in yeast results in the disappearance of actin cables from the cytoskeleton
    • Liu, H. and Bretscher, A. (1989). Disruption of the single tropomyosin gene in yeast results in the disappearance of actin cables from the cytoskeleton. Cell 57, 233-242.
    • (1989) Cell , vol.57 , pp. 233-242
    • Liu, H.1    Bretscher, A.2
  • 23
    • 0025824364 scopus 로고
    • Characterization of SIS1, a Saccharomyces cerevisiae homologue of bacterial dnaJ proteins
    • Luke, M. M., Sutton, A. and Arndt, K. T. (1991). Characterization of SIS1, a Saccharomyces cerevisiae homologue of bacterial dnaJ proteins. J. Cell Biol. 114, 623-638.
    • (1991) J. Cell Biol. , vol.114 , pp. 623-638
    • Luke, M.M.1    Sutton, A.2    Arndt, K.T.3
  • 24
    • 0023829903 scopus 로고
    • 'DNA Strider': A 'C' program for the fast analysis of DNA and protein sequences on the Apple Macintosh family of computers
    • Marck, C. (1988). 'DNA Strider': a 'C' program for the fast analysis of DNA and protein sequences on the Apple Macintosh family of computers. Nucl. Acids Res. 16, 1829-1836.
    • (1988) Nucl. Acids Res. , vol.16 , pp. 1829-1836
    • Marck, C.1
  • 25
    • 0027276617 scopus 로고
    • Characterization of the MKS1 gene, a new negative regulator of the ras-cyclic AMP pathway in Saccharomyces cerevisiae
    • Matsuura, A. and Anraku, Y. (1993). Characterization of the MKS1 gene, a new negative regulator of the ras-cyclic AMP pathway in Saccharomyces cerevisiae. Mol. Gen. Genet. 238, 6-16.
    • (1993) Mol. Gen. Genet. , vol.238 , pp. 6-16
    • Matsuura, A.1    Anraku, Y.2
  • 26
    • 0019501853 scopus 로고
    • Growth-rate-dependent regulation of ribosome synthesis in E. coli: Expression of the lacZ and galK genes fused to ribosomal promoters
    • Miura, A., Krueger, J. H., Itoh, S., de Boer, H. and Nomura, M. (1981). Growth-rate-dependent regulation of ribosome synthesis in E. coli: expression of the lacZ and galK genes fused to ribosomal promoters. Cell 25, 773-782.
    • (1981) Cell , vol.25 , pp. 773-782
    • Miura, A.1    Krueger, J.H.2    Itoh, S.3    De Boer, H.4    Nomura, M.5
  • 27
    • 0026761411 scopus 로고
    • Genetic and physical maps of Saccharomyces cerevisiae
    • Edition 11
    • Mortimer, R. K., Contopoulou, C. R. and King, J. S. (1992). Genetic and physical maps of Saccharomyces cerevisiae, Edition 11. Yeast 8, 817-902.
    • (1992) Yeast , vol.8 , pp. 817-902
    • Mortimer, R.K.1    Contopoulou, C.R.2    King, J.S.3
  • 28
    • 0028306585 scopus 로고
    • Isolation and characterization of CAJ1, a novel yeast homolog of dnaJ
    • Mukai, H., Shuntoh, H., Chang, C. D., et al. (1994). Isolation and characterization of CAJ1, a novel yeast homolog of dnaJ. Gene 145, 125-127.
    • (1994) Gene , vol.145 , pp. 125-127
    • Mukai, H.1    Shuntoh, H.2    Chang, C.D.3
  • 30
    • 0024095046 scopus 로고
    • Cloning and nucleotide sequence of the gene for dihydrolipoamide acetyltransferase from Saccharomyces cerevisiae
    • Niu, X. D., Browning, K. S., Behal, R. H. and Reed, L. J. (1988). Cloning and nucleotide sequence of the gene for dihydrolipoamide acetyltransferase from Saccharomyces cerevisiae. Proc. Nad. Acad. Sci. USA 85, 7546-7550.
    • (1988) Proc. Nad. Acad. Sci. USA , vol.85 , pp. 7546-7550
    • Niu, X.D.1    Browning, K.S.2    Behal, R.H.3    Reed, L.J.4
  • 31
    • 0023989064 scopus 로고
    • Improved tools for biological sequence comparison
    • Pearson, W. R. and Lipman, D. J. (1988). Improved tools for biological sequence comparison. Proc. Natl. Acad. Sci. USA 85, 2444-2448.
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 32
    • 0028921127 scopus 로고
    • NCA3, a nuclear gene involved in the mitochondrial expression of subunits 6 and 8 of the F0-F1 ATP synthase of S. cerevisiae
    • Pélissier, P., Camougrand, N., Velours, G. and Guérin, M. (1995). NCA3, a nuclear gene involved in the mitochondrial expression of subunits 6 and 8 of the F0-F1 ATP synthase of S. cerevisiae. Curr. Genet. 27, 409-416.
    • (1995) Curr. Genet. , vol.27 , pp. 409-416
    • Pélissier, P.1    Camougrand, N.2    Velours, G.3    Guérin, M.4
  • 33
    • 0028284879 scopus 로고
    • Mdj1p, a novel chaperone of the dnaJ family, is involved in mitochondrial biogenesis and protein folding
    • Rowley, N., Prip, B. C., Westermann, B., et al. (1994). Mdj1p, a novel chaperone of the dnaJ family, is involved in mitochondrial biogenesis and protein folding. Cell 77, 249-259.
    • (1994) Cell , vol.77 , pp. 249-259
    • Rowley, N.1    Prip, B.C.2    Westermann, B.3
  • 34
    • 0024787847 scopus 로고
    • A yeast gene important for protein assembly into the endoplasmatic reticulum and the nucleus has homology to dnaJ, an Escherichia coli heat shock protein
    • Sadler, I., Chiang, A., Kurihara, T., Rothblatt, J., Way, J. and Silver, P. (1989). A yeast gene important for protein assembly into the endoplasmatic reticulum and the nucleus has homology to dnaJ, an Escherichia coli heat shock protein. J. Cell. Biol. 109, 2665-2675.
    • (1989) J. Cell. Biol. , vol.109 , pp. 2665-2675
    • Sadler, I.1    Chiang, A.2    Kurihara, T.3    Rothblatt, J.4    Way, J.5    Silver, P.6
  • 35
    • 0028232938 scopus 로고
    • XDJ1, a gene encoding a novel non-essential DnaJ homologue from Saccharomyces cerevisiae
    • Schwarz, E., Westermann, B., Caplan, A. J., Ludwig, G. and Neupert, W. (1994). XDJ1, a gene encoding a novel non-essential DnaJ homologue from Saccharomyces cerevisiae. Gene 145, 121-124.
    • (1994) Gene , vol.145 , pp. 121-124
    • Schwarz, E.1    Westermann, B.2    Caplan, A.J.3    Ludwig, G.4    Neupert, W.5
  • 36
    • 0025733607 scopus 로고
    • Structure and function of hexose transporters
    • Silverman, M. (1991). Structure and function of hexose transporters. Ann. Rev. Biochem. 60, 757-794.
    • (1991) Ann. Rev. Biochem. , vol.60 , pp. 757-794
    • Silverman, M.1
  • 37
    • 0024471518 scopus 로고
    • Molecular cloning of chromosome I DNA from Saccharomyces cerevisiae: Localization of a repeated sequence containing an acid-phosphatase gene near a telomere of chromosome I and chromosome VIII
    • Steensma, H. Y., de Jonge, P., Kaptein, A. and Kaback, D. B. (1989). Molecular cloning of chromosome I DNA from Saccharomyces cerevisiae: localization of a repeated sequence containing an acid-phosphatase gene near a telomere of chromosome I and chromosome VIII. Curr. Genet. 16, 131-137.
    • (1989) Curr. Genet. , vol.16 , pp. 131-137
    • Steensma, H.Y.1    De Jonge, P.2    Kaptein, A.3    Kaback, D.B.4
  • 38
    • 0025187696 scopus 로고
    • The primary structure of rat ribosomal protein L9
    • Suzuki, K., Olvera, J. and Wool, I. G. (1990). The primary structure of rat ribosomal protein L9. Gene 93, 297-300.
    • (1990) Gene , vol.93 , pp. 297-300
    • Suzuki, K.1    Olvera, J.2    Wool, I.G.3
  • 40
    • 0023340211 scopus 로고
    • Specific binding of TUF factor to upstream activation sites of yeast ribosomal protein genes
    • Vignais, M., Woudt, L. P., Wassenaar, G. M., Mager, W. H., Sentenac, A. and Planta, R. J. (1987). Specific binding of TUF factor to upstream activation sites of yeast ribosomal protein genes. EMBO J. 6, 1451-1457.
    • (1987) EMBO J. , vol.6 , pp. 1451-1457
    • Vignais, M.1    Woudt, L.P.2    Wassenaar, G.M.3    Mager, W.H.4    Sentenac, A.5    Planta, R.J.6
  • 41
    • 0023046815 scopus 로고
    • A new method for predicting signal sequence cleavage sites
    • von Heijne, G. (1986). A new method for predicting signal sequence cleavage sites. Nucl. Acids Res 14, 4683-4690.
    • (1986) Nucl. Acids Res , vol.14 , pp. 4683-4690
    • Von Heijne, G.1
  • 42
    • 0028813135 scopus 로고
    • Nucleotide sequence and analysis of the centromeric region of yeast chromosome IX
    • Voss, H., Tamames, J., Teodoru, C., et al. (1995). Nucleotide sequence and analysis of the centromeric region of yeast chromosome IX. Yeast 11, 61-78.
    • (1995) Yeast , vol.11 , pp. 61-78
    • Voss, H.1    Tamames, J.2    Teodoru, C.3
  • 43
    • 0025029381 scopus 로고
    • The fork head domain; a novel DNA binding motif of eukaryotic transcription factors?
    • Weigel, D. and Jäckle, H. (1990). The fork head domain; a novel DNA binding motif of eukaryotic transcription factors? Cell 63, 455-456.
    • (1990) Cell , vol.63 , pp. 455-456
    • Weigel, D.1    Jäckle, H.2
  • 44
    • 0023309206 scopus 로고
    • Molecular cloning of chromosome I DNA from Saccharomyces cerevisiae: Isolation of the MAK16 gene and analysis of an adjacent gene essential for growth at low temperatures
    • Wickner, R. B., Koh, T. J., Crowley, J. C., O'Neil, J., and Kaback, D. B. (1987). Molecular cloning of chromosome I DNA from Saccharomyces cerevisiae: Isolation of the MAK16 gene and analysis of an adjacent gene essential for growth at low temperatures. Yeast 3, 51-57.
    • (1987) Yeast , vol.3 , pp. 51-57
    • Wickner, R.B.1    Koh, T.J.2    Crowley, J.C.3    O'Neil, J.4    Kaback, D.B.5
  • 45
    • 0021930514 scopus 로고
    • Meiotic gene conversion mutants in Saccharomyces cerevisiae. I. Isolation and characterization of pms1-1 and pms1-2
    • Williamson, M. S., Game, J. C. and Fogel, S. (1985). Meiotic gene conversion mutants in Saccharomyces cerevisiae. I. Isolation and characterization of pms1-1 and pms1-2. Genetics 110, 609-646.
    • (1985) Genetics , vol.110 , pp. 609-646
    • Williamson, M.S.1    Game, J.C.2    Fogel, S.3
  • 46
    • 0028794516 scopus 로고
    • Construction of a set of convenient Saccharomyces cerevisiae strains that are isogenic to S288C
    • Winston, F., Dollard, C. and Ricupero-Hovasse, S. L. (1995). Construction of a set of convenient Saccharomyces cerevisiae strains that are isogenic to S288C. Yeast 11, 53-55.
    • (1995) Yeast , vol.11 , pp. 53-55
    • Winston, F.1    Dollard, C.2    Ricupero-Hovasse, S.L.3
  • 47
    • 0028173665 scopus 로고
    • Sequence around the centromere of Saccharomyces cerevisiae chromosome II: Similarity of CEN2 to CEN4
    • Wolfe, K. H. and Lohan, A. J. (1994). Sequence around the centromere of Saccharomyces cerevisiae chromosome II: similarity of CEN2 to CEN4. Yeast 10, S41-S46.
    • (1994) Yeast , vol.10
    • Wolfe, K.H.1    Lohan, A.J.2
  • 48
    • 0021282250 scopus 로고
    • Cloning vectors that yield high levels of single-stranded DNA for rapid DNA sequencing
    • Zagursky, R. J. and Berman, M. L. (1987). Cloning vectors that yield high levels of single-stranded DNA for rapid DNA sequencing. Gene 27, 183.
    • (1987) Gene , vol.27 , pp. 183
    • Zagursky, R.J.1    Berman, M.L.2
  • 49
    • 0026758377 scopus 로고
    • Zuotin, a putative Z-DNA binding protein in Saccharomyces cerevisiae
    • Zhang, S., Lockshin, C., Herbert, A., Winter, E. and Rich, A. (1992). Zuotin, a putative Z-DNA binding protein in Saccharomyces cerevisiae. EMBO J. 11, 3787-3796.
    • (1992) EMBO J. , vol.11 , pp. 3787-3796
    • Zhang, S.1    Lockshin, C.2    Herbert, A.3    Winter, E.4    Rich, A.5


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