메뉴 건너뛰기




Volumn 32, Issue 3, 1996, Pages 436-446

Characterization of the mouse gene for the α1 chain of type XVIII collagen (Col18a1) reveals that the three variant N-terminal polypeptide forms are transcribed from two widely separated promoters

Author keywords

[No Author keywords available]

Indexed keywords

COLLAGEN FIBRIL;

EID: 0029867830     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.1996.0139     Document Type: Article
Times cited : (53)

References (45)
  • 1
    • 0027491441 scopus 로고
    • Identification of a novel collagen chain represented by extensive interruptions in the triple-helical region
    • Abe, N., Muragaki, Y., Yoshioka, H., Inoue, H., and Ninomiya, Y. (1993). Identification of a novel collagen chain represented by extensive interruptions in the triple-helical region. Biochem. Biophys. Res. Commun. 196: 576-582.
    • (1993) Biochem. Biophys. Res. Commun. , vol.196 , pp. 576-582
    • Abe, N.1    Muragaki, Y.2    Yoshioka, H.3    Inoue, H.4    Ninomiya, Y.5
  • 3
    • 0025080442 scopus 로고
    • Identification of a cartilage-specific promoter within intron 2 of the chick α2(I) collagen gene
    • Bennett, V. D., and Adams, S. L. (1990). Identification of a cartilage-specific promoter within intron 2 of the chick α2(I) collagen gene. J. Biol. Chem. 265: 2223-2230.
    • (1990) J. Biol. Chem. , vol.265 , pp. 2223-2230
    • Bennett, V.D.1    Adams, S.L.2
  • 4
    • 0027155320 scopus 로고
    • Murine α1(VI) collagen chain. Complete amino acid sequence and identification of the gene promoter region
    • Bonaldo, P., Piccolo, S., Marvulli, D., Volpin, D., Marigo, V., and Bressan, G. M. (1993). Murine α1(VI) collagen chain. Complete amino acid sequence and identification of the gene promoter region. Matrix 13: 223-233.
    • (1993) Matrix , vol.13 , pp. 223-233
    • Bonaldo, P.1    Piccolo, S.2    Marvulli, D.3    Volpin, D.4    Marigo, V.5    Bressan, G.M.6
  • 5
    • 0026654760 scopus 로고
    • The modular architecture of vertebrate collagens
    • Bork, P. (1992). The modular architecture of vertebrate collagens. FEBS Lett. 307: 49-54.
    • (1992) FEBS Lett. , vol.307 , pp. 49-54
    • Bork, P.1
  • 7
    • 0023277545 scopus 로고
    • Single-step method of RNA isolation by acid guanidium thiocyanate-phenol-chloroform extraction
    • Chomczynski, P., and Sacchi, N. (1987). Single-step method of RNA isolation by acid guanidium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162: 156-159.
    • (1987) Anal. Biochem. , vol.162 , pp. 156-159
    • Chomczynski, P.1    Sacchi, N.2
  • 8
    • 0028244102 scopus 로고
    • Structural organization of the human type VII collagen gene (COL7A1), composed of more exons than any previously characterized gene
    • Christiano, A. M., Hoffman, G. G., Chung-Honet, L. C., Lee, S., Cheng, W., Uitto, J., and Greenspan, D. S. (1994). Structural organization of the human type VII collagen gene (COL7A1), composed of more exons than any previously characterized gene. Genomics 21: 169-179.
    • (1994) Genomics , vol.21 , pp. 169-179
    • Christiano, A.M.1    Hoffman, G.G.2    Chung-Honet, L.C.3    Lee, S.4    Cheng, W.5    Uitto, J.6    Greenspan, D.S.7
  • 9
    • 0025877635 scopus 로고
    • Complete structure of the chicken α2(VI) collagen gene
    • Hayman, A. R., Koppel, J., and Trueb, B. (1991). Complete structure of the chicken α2(VI) collagen gene. Eur. J. Biochem. 197: 177-184.
    • (1991) Eur. J. Biochem. , vol.197 , pp. 177-184
    • Hayman, A.R.1    Koppel, J.2    Trueb, B.3
  • 11
    • 0027158485 scopus 로고
    • Collagens and their abnormalities in a wide spectrum of diseases
    • Kivirikko, K. I. (1993). Collagens and their abnormalities in a wide spectrum of diseases. Ann. Med. 25: 113-126.
    • (1993) Ann. Med. , vol.25 , pp. 113-126
    • Kivirikko, K.I.1
  • 12
    • 0028170187 scopus 로고
    • Primary structure of the α1 chain of human type XV collagen and exon-intron organization in the 3′ region of the corresponding gene
    • Kivirikko, S., Heinamäki, P., Rehn, M., Honkanen, N., Myers, J. C., and Pihlajaniemi, T. (1994). Primary structure of the α1 chain of human type XV collagen and exon-intron organization in the 3′ region of the corresponding gene. J. Biol. Chem. 269: 4773-4779.
    • (1994) J. Biol. Chem. , vol.269 , pp. 4773-4779
    • Kivirikko, S.1    Heinamäki, P.2    Rehn, M.3    Honkanen, N.4    Myers, J.C.5    Pihlajaniemi, T.6
  • 13
    • 0029089660 scopus 로고
    • Transcriptional promoter of the human α1(V) collagen gene (COL5A1)
    • Lee, S., and Greenspan, D. S. (1995). Transcriptional promoter of the human α1(V) collagen gene (COL5A1). Biochem. J. 310: 15-22.
    • (1995) Biochem. J. , vol.310 , pp. 15-22
    • Lee, S.1    Greenspan, D.S.2
  • 14
    • 0026327822 scopus 로고
    • Genomic organization of collagenous domains and chromosomal assignment of human 180-kDa bullous pemphigoid antigen-2, a novel collagen of stratified squamous epithelium
    • Li, K. H., Sawamura, D., Giudice, G. J., Diaz, L. A., Mattei, M. G., Chu, M. L., and Uitto, J. (1991). Genomic organization of collagenous domains and chromosomal assignment of human 180-kDa bullous pemphigoid antigen-2, a novel collagen of stratified squamous epithelium. J. Biol. Chem. 266: 24064-24069.
    • (1991) J. Biol. Chem. , vol.266 , pp. 24064-24069
    • Li, K.H.1    Sawamura, D.2    Giudice, G.J.3    Diaz, L.A.4    Mattei, M.G.5    Chu, M.L.6    Uitto, J.7
  • 15
    • 0021856758 scopus 로고
    • A distinct class of vertebrate collagen genes encodes chicken type IX collagen polypeptides
    • Lozano, G., Ninomiya, Y., Thompson, H., and Olsen, B. R. (1985). A distinct class of vertebrate collagen genes encodes chicken type IX collagen polypeptides. Proc. Natl. Acad. Sci. USA 82: 4050-4054.
    • (1985) Proc. Natl. Acad. Sci. USA , vol.82 , pp. 4050-4054
    • Lozano, G.1    Ninomiya, Y.2    Thompson, H.3    Olsen, B.R.4
  • 16
    • 0026749541 scopus 로고
    • Alternative mRNA splicing
    • McKeown, M. (1992). Alternative mRNA splicing. Annu. Rev. Cell Biol. 8: 133-155.
    • (1992) Annu. Rev. Cell Biol. , vol.8 , pp. 133-155
    • McKeown, M.1
  • 17
    • 0020050314 scopus 로고
    • A catalogue of splice junction sequences
    • Mount, S. M. (1982). A catalogue of splice junction sequences. Nucleic Acids Res. 10: 459-472.
    • (1982) Nucleic Acids Res. , vol.10 , pp. 459-472
    • Mount, S.M.1
  • 18
    • 0028169716 scopus 로고
    • The human α1(XV) collagen chain contains a large amino-terminal non-triple-helical domain with a tandem repeat structure and homology to α1(XVIII) collagen
    • Muragaki, Y., Abe, N., Ninomiya, Y., Olsen, B. R., and Ooshima, A. (1994). The human α1(XV) collagen chain contains a large amino-terminal non-triple-helical domain with a tandem repeat structure and homology to α1(XVIII) collagen. J. Biol. Chem. 269: 4042-4046.
    • (1994) J. Biol. Chem. , vol.269 , pp. 4042-4046
    • Muragaki, Y.1    Abe, N.2    Ninomiya, Y.3    Olsen, B.R.4    Ooshima, A.5
  • 19
    • 0028981205 scopus 로고
    • Mouse Col18a1 is expressed in a tissue-specific manner as three alternative variants and is localized in basement membrane zones
    • Muragaki, Y., Timmons, S., Griffith, C. M., Oh, S. P., Fadel, B., Quertermous, T., and Olsen, B. R. (1995). Mouse Col18a1 is expressed in a tissue-specific manner as three alternative variants and is localized in basement membrane zones. Proc. Natl. Acad. Sci. USA 92: 8763-8767.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 8763-8767
    • Muragaki, Y.1    Timmons, S.2    Griffith, C.M.3    Oh, S.P.4    Fadel, B.5    Quertermous, T.6    Olsen, B.R.7
  • 20
    • 0026448116 scopus 로고
    • Identification of a previously unknown human collagen chain, α1(XV), characterized by extensive interruptions in the triple-helical region
    • Myers, J. C., Kivirikko, S., Gordon, M. K., Dion, A. S., and Pihlajaniemi, T. (1992). Identification of a previously unknown human collagen chain, α1(XV), characterized by extensive interruptions in the triple-helical region. Proc. Natl. Acad. Sci. USA 89: 10144-10148.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 10144-10148
    • Myers, J.C.1    Kivirikko, S.2    Gordon, M.K.3    Dion, A.S.4    Pihlajaniemi, T.5
  • 21
    • 0028322141 scopus 로고
    • An alternative transcript of the chick type III collagen gene that does not encode type III collagen
    • Nah, H. D., Niu, Z., and Adams, S. L. (1994). An alternative transcript of the chick type III collagen gene that does not encode type III collagen. J. Biol. Chem. 269: 16443-16448.
    • (1994) J. Biol. Chem. , vol.269 , pp. 16443-16448
    • Nah, H.D.1    Niu, Z.2    Adams, S.L.3
  • 22
    • 0024326881 scopus 로고
    • Tissue-specific forms of type IX collagen-proteoglycan arise from the use of two widely separated promoters
    • Nishumura, I., Muragaki, Y., and Olsen, B. R. (1989). Tissue-specific forms of type IX collagen-proteoglycan arise from the use of two widely separated promoters. J. Biol. Chem. 264: 20033-20041.
    • (1989) J. Biol. Chem. , vol.264 , pp. 20033-20041
    • Nishumura, I.1    Muragaki, Y.2    Olsen, B.R.3
  • 23
    • 0001033082 scopus 로고
    • Isolation and sequencing of cDNAs for proteins with multiple domains of Gly-Xaa-Yaa repeats identify a distinct family of collagenous proteins
    • Oh, S. P., Kamagata, Y., Muragaki, Y., Timmons, S., Ooshima, A., and Olsen, B. R. (1994a). Isolation and sequencing of cDNAs for proteins with multiple domains of Gly-Xaa-Yaa repeats identify a distinct family of collagenous proteins. Proc. Natl. Acad. Sci. USA 91: 4229-4233.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 4229-4233
    • Oh, S.P.1    Kamagata, Y.2    Muragaki, Y.3    Timmons, S.4    Ooshima, A.5    Olsen, B.R.6
  • 24
    • 0028210848 scopus 로고
    • Cloning of cDNA and genomic DNA encoding human type XVIII collagen and localization of the α1(XVIII) collagen gene to mouse chromosome 10 and human chromosome 21
    • Oh, S. P., Warman, M. L., Seldin, M. F., Cheng, S. D., Knoll, J. H., Timmons, S., and Olsen, B. R. (1994b). Cloning of cDNA and genomic DNA encoding human type XVIII collagen and localization of the α1(XVIII) collagen gene to mouse chromosome 10 and human chromosome 21. Genomics 19: 494-499.
    • (1994) Genomics , vol.19 , pp. 494-499
    • Oh, S.P.1    Warman, M.L.2    Seldin, M.F.3    Cheng, S.D.4    Knoll, J.H.5    Timmons, S.6    Olsen, B.R.7
  • 25
    • 0027992330 scopus 로고
    • The exon structure of the mouse α2(IX) collagen gene shows unexpected divergence from the chick gene
    • Perälä, M., Elima, K., Metsäranta, M., Rosati, R., de Crombrugghe, B., and Vuorio, E. (1994). The exon structure of the mouse α2(IX) collagen gene shows unexpected divergence from the chick gene. J. Biol. Chem. 269: 5064-5071.
    • (1994) J. Biol. Chem. , vol.269 , pp. 5064-5071
    • Perälä, M.1    Elima, K.2    Metsäranta, M.3    Rosati, R.4    De Crombrugghe, B.5    Vuorio, E.6
  • 26
    • 0023558103 scopus 로고
    • Characterization of pro-α2(I) collagen gene mutation by nuclease S1 mapping
    • Pihlajaniemi, T., and Myers, J. C. (1987). Characterization of pro-α2(I) collagen gene mutation by nuclease S1 mapping. Methods Enzymol. 145: 213-222.
    • (1987) Methods Enzymol. , vol.145 , pp. 213-222
    • Pihlajaniemi, T.1    Myers, J.C.2
  • 27
    • 0029158843 scopus 로고
    • Two new collagen subgroups: Membrane-associated collagens, and types XV and XVIII
    • Pihlajaniemi, T., and Rehn, M. (1995). Two new collagen subgroups: Membrane-associated collagens, and types XV and XVIII. Prog. Nucleic Acid Res. Mol. Biol. 50: 225-262.
    • (1995) Prog. Nucleic Acid Res. Mol. Biol. , vol.50 , pp. 225-262
    • Pihlajaniemi, T.1    Rehn, M.2
  • 28
    • 0029006974 scopus 로고
    • Collagens: Molecular biology, diseases, and potentials for therapy
    • Prockop, D. J., and Kivirikko, K. I. (1995). Collagens: Molecular biology, diseases, and potentials for therapy. Annu. Rev. Biochem. 64: 403-434.
    • (1995) Annu. Rev. Biochem. , vol.64 , pp. 403-434
    • Prockop, D.J.1    Kivirikko, K.I.2
  • 29
    • 0028176183 scopus 로고
    • α1(XVIII), a collagen chain with frequent interruptions in the collagenous sequence, a distinct tissue distribution, and homology with type XV collagen
    • Rehn, M., and Pihlajaniemi, T. (1994). α1(XVIII), a collagen chain with frequent interruptions in the collagenous sequence, a distinct tissue distribution, and homology with type XV collagen. Proc. Natl. Acad. Sci. USA 91: 4234-4238.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 4234-4238
    • Rehn, M.1    Pihlajaniemi, T.2
  • 30
    • 0028964416 scopus 로고
    • Identification of three N-terminal ends of type XVIII collagen chains and tissue-specific differences in the expression of the corresponding transcripts
    • Rehn, M., and Pihlajaniemi, T. (1995). Identification of three N-terminal ends of type XVIII collagen chains and tissue-specific differences in the expression of the corresponding transcripts. J. Biol. Chem. 270: 4705-4711.
    • (1995) J. Biol. Chem. , vol.270 , pp. 4705-4711
    • Rehn, M.1    Pihlajaniemi, T.2
  • 31
    • 0028174283 scopus 로고
    • Primary structure of the α1 chain of mouse type XVIII collagen, partial structure of the corresponding gene, and comparison of the α1(XVIII) chain with its homologue, the α1(XV) collagen chain
    • Rehn, M., Hintikka, E., and Pihlajaniemi, T. (1994). Primary structure of the α1 chain of mouse type XVIII collagen, partial structure of the corresponding gene, and comparison of the α1(XVIII) chain with its homologue, the α1(XV) collagen chain. J. Biol. Chem. 269: 13929-13935.
    • (1994) J. Biol. Chem. , vol.269 , pp. 13929-13935
    • Rehn, M.1    Hintikka, E.2    Pihlajaniemi, T.3
  • 32
    • 0025259888 scopus 로고
    • Alternative splicing of the human α2(VI) collagen gene generates multiple mRNA transcripts which predict three protein variants with distinct carboxyl termini
    • Saitta, B., Stokes, D. G., Vissing, H., Timpl, R., and Chu, M.-L. (1990). Alternative splicing of the human α2(VI) collagen gene generates multiple mRNA transcripts which predict three protein variants with distinct carboxyl termini. J. Biol. Chem. 265: 6473-6480.
    • (1990) J. Biol. Chem. , vol.265 , pp. 6473-6480
    • Saitta, B.1    Stokes, D.G.2    Vissing, H.3    Timpl, R.4    Chu, M.-L.5
  • 33
    • 0026006150 scopus 로고
    • The exon organization of the triple-helical coding regions of the human α1(VI) and α2(VI) collagen genes is highly similar
    • Saitta, B., Wang, Y. M., Renkart, L., Zhang, R. Z., Pan, T. C., Timpl, R., and Chu, M. L. (1991). The exon organization of the triple-helical coding regions of the human α1(VI) and α2(VI) collagen genes is highly similar. Genomics 11: 145-153.
    • (1991) Genomics , vol.11 , pp. 145-153
    • Saitta, B.1    Wang, Y.M.2    Renkart, L.3    Zhang, R.Z.4    Pan, T.C.5    Timpl, R.6    Chu, M.L.7
  • 34
    • 0026782169 scopus 로고
    • Human α2(VI) collagen gene. Heterogeneity at the 5′-untranslated region generated by an alternative exon
    • Saitta, B., Timpl, R., and Chu, M.-L. (1992). Human α2(VI) collagen gene. Heterogeneity at the 5′-untranslated region generated by an alternative exon. J. Biol. Chem. 267: 6188-6196.
    • (1992) J. Biol. Chem. , vol.267 , pp. 6188-6196
    • Saitta, B.1    Timpl, R.2    Chu, M.-L.3
  • 37
    • 0024364291 scopus 로고
    • Structural organization of the gene for the α1 chain of human type IV collagen
    • Soininen, R., Huotari, M., Ganguly, A., Prockop, D. J., and Tryggvason, K. (1989). Structural organization of the gene for the α1 chain of human type IV collagen. J. Biol. Chem. 264: 13565-13571.
    • (1989) J. Biol. Chem. , vol.264 , pp. 13565-13571
    • Soininen, R.1    Huotari, M.2    Ganguly, A.3    Prockop, D.J.4    Tryggvason, K.5
  • 38
    • 0028080793 scopus 로고
    • The genes COL4a5 and COL4a6, coding for basement membrane collagen chains α5(IV) and α6(IV), are located head-to-head in close proximity on human chromosome Xq22 and COL4A6 is transcribed from two alternative promoters
    • Sugimoto, M., Oohashi, T., and Ninomiya, Y. (1994). The genes COL4A5 and COL4A6, coding for basement membrane collagen chains α5(IV) and α6(IV), are located head-to-head in close proximity on human chromosome Xq22 and COL4A6 is transcribed from two alternative promoters. Proc. Natl. Acad. Sci. USA 91: 11679-11683.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 11679-11683
    • Sugimoto, M.1    Oohashi, T.2    Ninomiya, Y.3
  • 41
    • 0029143703 scopus 로고
    • The human COL11A2 gene structure indicates that the gene has not evolved with the genes for the major fibrillar collagens
    • Vuoristo, M. M., Pihlajamaa, T., Vanderberg, P., Prockop, D. J., and Ala-Kokko, L. (1995). The human COL11A2 gene structure indicates that the gene has not evolved with the genes for the major fibrillar collagens. J. Biol. Chem. 270: 22873-22881.
    • (1995) J. Biol. Chem. , vol.270 , pp. 22873-22881
    • Vuoristo, M.M.1    Pihlajamaa, T.2    Vanderberg, P.3    Prockop, D.J.4    Ala-Kokko, L.5
  • 42
    • 0026537843 scopus 로고
    • Structural comparison of the chicken genes for α1(VI) and α2(VI) collagen
    • Wälchli, C., Koller, E., Trueb, J., and Trueb, B. (1992). Structural comparison of the chicken genes for α1(VI) and α2(VI) collagen. Eur. J. Biochem. 205: 583-589.
    • (1992) Eur. J. Biochem. , vol.205 , pp. 583-589
    • Wälchli, C.1    Koller, E.2    Trueb, J.3    Trueb, B.4
  • 44
    • 0029046712 scopus 로고
    • A human homologue of the Drosophila polarity gene frizzled has been identified and mapped to 17q21.1
    • Zhao, Z., Lee, C. C., Baldini, A., and Caskey, C. T. (1995). A human homologue of the Drosophila polarity gene frizzled has been identified and mapped to 17q21.1. Genomics 27: 370-373.
    • (1995) Genomics , vol.27 , pp. 370-373
    • Zhao, Z.1    Lee, C.C.2    Baldini, A.3    Caskey, C.T.4
  • 45
    • 0028285270 scopus 로고
    • Structure of the human type IV collagen COL4A5 gene
    • Zhou, J., Leinonen, A., and Tryggvason, K. (1994). Structure of the human type IV collagen COL4A5 gene. J. Biol. Chem. 269: 6608-6614.
    • (1994) J. Biol. Chem. , vol.269 , pp. 6608-6614
    • Zhou, J.1    Leinonen, A.2    Tryggvason, K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.