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Volumn 178, Issue 6, 1996, Pages 1505-1514

Identification and analysis of the dissimilatory nitrous oxide reduction genes, nosRZDFY, of Rhizobium meliloti

Author keywords

[No Author keywords available]

Indexed keywords

COPPER; FERREDOXIN; NITROUS OXIDE; REGULATOR PROTEIN;

EID: 0029865750     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/jb.178.6.1505-1514.1996     Document Type: Article
Times cited : (71)

References (55)
  • 1
    • 3142607815 scopus 로고
    • Personal communication
    • Batut, J. (INRA-CNRS). 1992. Personal communication.
    • (1992)
    • Batut, J.1
  • 2
    • 0024445091 scopus 로고
    • fixK, a gene homologous with fnr and crp from Escherichia coli, regulates nitrogen fixation genes both positively and negatively in Rhizobium meliloti
    • Batut, J., M.-L. Daveran-Mingot, M. David, J. Jacobs, A. M. Garnerone, and D. Kahn. 1989. fixK, a gene homologous with fnr and crp from Escherichia coli, regulates nitrogen fixation genes both positively and negatively in Rhizobium meliloti. EMBO J. 8:1279-1286.
    • (1989) EMBO J. , vol.8 , pp. 1279-1286
    • Batut, J.1    Daveran-Mingot, M.-L.2    David, M.3    Jacobs, J.4    Garnerone, A.M.5    Kahn, D.6
  • 3
    • 0014674485 scopus 로고
    • A complementation analysis of the restriction and modification of DNA in Escherichia coli
    • Boyer, H. W., and D. Roulland-Dussoix. 1969. A complementation analysis of the restriction and modification of DNA in Escherichia coli. J. Mol. Biol. 41:459-472
    • (1969) J. Mol. Biol. , vol.41 , pp. 459-472
    • Boyer, H.W.1    Roulland-Dussoix, D.2
  • 4
    • 0022392045 scopus 로고
    • Denitrification by a diazotrophic Pseudomonas species
    • Chan, Y.-K. 1985. Denitrification by a diazotrophic Pseudomonas species. Can. J. Microbiol. 31:1136-1141.
    • (1985) Can. J. Microbiol. , vol.31 , pp. 1136-1141
    • Chan, Y.-K.1
  • 5
    • 0041777129 scopus 로고
    • Denitrification activity ot phage types representative of two populations of indigenous Rhizobium meliloti
    • Chan, Y.-K., L. Barran, and E. S. P. Bromfield. 1989. Denitrification activity ot phage types representative of two populations of indigenous Rhizobium meliloti Can. J. Microbiol. 35:737-740.
    • (1989) Can. J. Microbiol. , vol.35 , pp. 737-740
    • Chan, Y.-K.1    Barran, L.2    Bromfield, E.S.P.3
  • 7
    • 0027508715 scopus 로고
    • Detection of a nitrous oxide reductase structural gene in Rhizobium meliloti strains and its location on the nod megaplasmid of JJ1c10 and SU47
    • Chan, Y.-K., and R. Wheatcroft. 1993. Detection of a nitrous oxide reductase structural gene in Rhizobium meliloti strains and its location on the nod megaplasmid of JJ1c10 and SU47. J. Bacteriol. 175:19-26.
    • (1993) J. Bacteriol. , vol.175 , pp. 19-26
    • Chan, Y.-K.1    Wheatcroft, R.2
  • 9
    • 0026700226 scopus 로고
    • NosR, a membrane-bound regulatory component necessary for expression of nitrous oxide reductase in denitrifying Pseudomonas stutzeri
    • Cuypers, H., A. Viebrock-Sambale, and W. G. Zumft. 1992 NosR, a membrane-bound regulatory component necessary for expression of nitrous oxide reductase in denitrifying Pseudomonas stutzeri. J. Bacteriol. 174:5332-5339.
    • (1992) J. Bacteriol. , vol.174 , pp. 5332-5339
    • Cuypers, H.1    Viebrock-Sambale, A.2    Zumft, W.G.3
  • 10
    • 0013605499 scopus 로고
    • Regulatory components of the denitrification gene cluster of Pseudomonas stutzeri
    • E. Galli, S. Silver, and B. Witholt (ed.), American Society for Microbiology, Washington, D.C.
    • Cuypers, H., and W. G. Zumft. 1992. Regulatory components of the denitrification gene cluster of Pseudomonas stutzeri, p. 188-197. In E. Galli, S. Silver, and B. Witholt (ed.), Pseudomonas: molecular biology and biotechnology American Society for Microbiology, Washington, D.C.
    • (1992) Pseudomonas: Molecular Biology and Biotechnology , pp. 188-197
    • Cuypers, H.1    Zumft, W.G.2
  • 11
    • 0022636854 scopus 로고
    • Tn5 mapping of Rhizobium nitrogen fixation genes
    • Ditta, G. 1986 Tn5 mapping of Rhizobium nitrogen fixation genes. Methods Enzymol. 118:519-528.
    • (1986) Methods Enzymol. , vol.118 , pp. 519-528
    • Ditta, G.1
  • 12
    • 0022000283 scopus 로고
    • Plasmids related to the broad host range vector pRK290 useful for gene cloning and for monitoring gene expression
    • Ditta, G., T. Schmidhauser, E. Yakobson, P. Lu, X.-W. Liang, D. R. Finlay, D. Guiney, and D. R. Helinski. 1985. Plasmids related to the broad host range vector pRK290 useful for gene cloning and for monitoring gene expression. Plasmid 13:149-153.
    • (1985) Plasmid , vol.13 , pp. 149-153
    • Ditta, G.1    Schmidhauser, T.2    Yakobson, E.3    Lu, P.4    Liang, X.-W.5    Finlay, D.R.6    Guiney, D.7    Helinski, D.R.8
  • 13
    • 1842349188 scopus 로고
    • Broad host range DNA cloning system for Gram-negative bacteria: Construction of a gene bank of Rhizobium meliloti
    • Ditta, G., S. Stanfield, D. Corbin, and D. R. Helinski. 1980. Broad host range DNA cloning system for Gram-negative bacteria: construction of a gene bank of Rhizobium meliloti. Proc. Natl. Acad. Sci. USA 77:7347-7351
    • (1980) Proc. Natl. Acad. Sci. USA , vol.77 , pp. 7347-7351
    • Ditta, G.1    Stanfield, S.2    Corbin, D.3    Helinski, D.R.4
  • 14
    • 0022480199 scopus 로고
    • The nodI gene product of Rhizobium leguminosarum is closely related to ATP-binding bacterial transport proteins: Nucleotide sequence analysis of the nodI and nodJ genes
    • Evans, I. J., and J. A. Downie. 1986. The nodI gene product of Rhizobium leguminosarum is closely related to ATP-binding bacterial transport proteins: nucleotide sequence analysis of the nodI and nodJ genes Gene 43:95-101.
    • (1986) Gene , vol.43 , pp. 95-101
    • Evans, I.J.1    Downie, J.A.2
  • 15
    • 0025959056 scopus 로고
    • Detection of alternative nitrogenases in aerobic gram-negative nitrogen-fixing bacteria
    • Fallik, E., Y.-K. Chan, and R. L. Robson. 1991. Detection of alternative nitrogenases in aerobic gram-negative nitrogen-fixing bacteria J. Bacteriol. 173:365-371.
    • (1991) J. Bacteriol. , vol.173 , pp. 365-371
    • Fallik, E.1    Chan, Y.-K.2    Robson, R.L.3
  • 16
    • 0000527903 scopus 로고
    • Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in trans
    • Figurski, D. H., and D. R. Helinski. 1979. Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in trans. Proc. Natl. Acad. Sci. USA 76:1648-1652.
    • (1979) Proc. Natl. Acad. Sci. USA , vol.76 , pp. 1648-1652
    • Figurski, D.H.1    Helinski, D.R.2
  • 17
    • 0022474397 scopus 로고
    • Second symbiotic megaplasmid in Rhizobium meliloti carrying exopolysaccharide and thiamine synthesis genes
    • Finan, T. M., B. Kunkel, G. F. D. Vos, and E. R. Signer. 1986. Second symbiotic megaplasmid in Rhizobium meliloti carrying exopolysaccharide and thiamine synthesis genes. J Bacteriol. 167:66-72.
    • (1986) J Bacteriol. , vol.167 , pp. 66-72
    • Finan, T.M.1    Kunkel, B.2    Vos, G.F.D.3    Signer, E.R.4
  • 18
    • 0028108941 scopus 로고
    • Genetic regulation of nitrogen fixation in rhizobia
    • Fischer, H.-M. 1994. Genetic regulation of nitrogen fixation in rhizobia. Microbiol. Rev 58:352-386.
    • (1994) Microbiol. Rev , vol.58 , pp. 352-386
    • Fischer, H.-M.1
  • 19
    • 0020429966 scopus 로고
    • Construction of a broad host range cosmid cloning vector and its use in the genetic analysis of Rhizobium mutants
    • Friedman, A. M., S. R. Long, S. E. Brown, W. J. Buikema, and F. M. Ausubel. 1982. Construction of a broad host range cosmid cloning vector and its use in the genetic analysis of Rhizobium mutants. Gene 18:289-296.
    • (1982) Gene , vol.18 , pp. 289-296
    • Friedman, A.M.1    Long, S.R.2    Brown, S.E.3    Buikema, W.J.4    Ausubel, F.M.5
  • 21
    • 0025974210 scopus 로고
    • Positive FNR-like control of anaerobic arginine degradation and nitrate respiration in Pseudomonas aeruginosa
    • Galimand, M., M. Gamper, A. Zimmermann, and D. Haas. 1991. Positive FNR-like control of anaerobic arginine degradation and nitrate respiration in Pseudomonas aeruginosa J. Bacteriol. 173:1598-1606.
    • (1991) J. Bacteriol. , vol.173 , pp. 1598-1606
    • Galimand, M.1    Gamper, M.2    Zimmermann, A.3    Haas, D.4
  • 24
    • 0020959710 scopus 로고
    • Studies on transformation of Escherichia coli with plasmids
    • Hanahan, D. 1983. Studies on transformation of Escherichia coli with plasmids. J. Mol Biol. 166:557-580.
    • (1983) J. Mol Biol. , vol.166 , pp. 557-580
    • Hanahan, D.1
  • 25
    • 0027440731 scopus 로고
    • Sequence and expression of the gene encoding the respiratory nitrous-oxide reductase from Paracoccus denitrificans: New and conserved structural and regulatory motifs
    • Hoeren, F. U., B. C. Berks, S. J. Ferguson, and J. E. G. McCarthy. 1993. Sequence and expression of the gene encoding the respiratory nitrous-oxide reductase from Paracoccus denitrificans: new and conserved structural and regulatory motifs. Eur. J. Biochem. 218:49-57.
    • (1993) Eur. J. Biochem. , vol.218 , pp. 49-57
    • Hoeren, F.U.1    Berks, B.C.2    Ferguson, S.J.3    McCarthy, J.E.G.4
  • 26
    • 0023407454 scopus 로고
    • Structural models of the redox centres in cytochrome oxidase
    • Holm, L., M. Saraste, and M. Wikström. 1987. Structural models of the redox centres in cytochrome oxidase. EMBO J. 6:2819-2823.
    • (1987) EMBO J. , vol.6 , pp. 2819-2823
    • Holm, L.1    Saraste, M.2    Wikström, M.3
  • 28
    • 0021346974 scopus 로고
    • An RP4-prime containing a 285 kb fragment of Rhizobium meliloti pSym megaplasmid: Structural characterization and utilization for genetic studies of symbiotic functions controlled by pSym
    • Julliot, J. S., I. Dusha, M. H. Renalier, B. Terzaghi, A. M. Garnerone, and P. Boistard. 1984. An RP4-prime containing a 285 kb fragment of Rhizobium meliloti pSym megaplasmid: structural characterization and utilization for genetic studies of symbiotic functions controlled by pSym. Mol. Gen. Genet. 193:17-26.
    • (1984) Mol. Gen. Genet. , vol.193 , pp. 17-26
    • Julliot, J.S.1    Dusha, I.2    Renalier, M.H.3    Terzaghi, B.4    Garnerone, A.M.5    Boistard, P.6
  • 29
    • 0019904249 scopus 로고
    • Wide host range cloning vectors: A cosmid clone bank of Agrobacterium Ti plasmid
    • Knauf, V. C., and E. W. Nester. 1982. Wide host range cloning vectors: a cosmid clone bank of Agrobacterium Ti plasmid Plasmid 8:45-54
    • (1982) Plasmid , vol.8 , pp. 45-54
    • Knauf, V.C.1    Nester, E.W.2
  • 30
    • 0020371278 scopus 로고
    • Identification of a copper protein as part of nitrous oxide-reducing system in nitrite-respiring (denitrifying) pseudomonads
    • Matsubara, T., and W. G. Zumft. 1982. Identification of a copper protein as part of nitrous oxide-reducing system in nitrite-respiring (denitrifying) pseudomonads Arch. Microbiol. 132:322-328.
    • (1982) Arch. Microbiol. , vol.132 , pp. 322-328
    • Matsubara, T.1    Zumft, W.G.2
  • 31
    • 0022196171 scopus 로고
    • Rhizobial denitrification: A review
    • O'Hara, G. W., and R. M. Daniel. 1985. Rhizobial denitrification: a review. Soil Biol. Biochem 17:1-9.
    • (1985) Soil Biol. Biochem , vol.17 , pp. 1-9
    • O'Hara, G.W.1    Daniel, R.M.2
  • 32
    • 0023480691 scopus 로고
    • Examination of protein sequence homologies. IV. Twenty-seven bacterial ferredoxins
    • Otaka, E., and T. Ooi. 1987. Examination of protein sequence homologies. IV. Twenty-seven bacterial ferredoxins. J. Mol. Evol. 26:257-267
    • (1987) J. Mol. Evol. , vol.26 , pp. 257-267
    • Otaka, E.1    Ooi, T.2
  • 33
    • 0023059178 scopus 로고
    • A conformational preference parameter to predict helices in integral membrane proteins
    • Rao, J. K. M., and P. Argos. 1986. A conformational preference parameter to predict helices in integral membrane proteins Biochim. Biophys. Acta 869:197-214.
    • (1986) Biochim. Biophys. Acta , vol.869 , pp. 197-214
    • Rao, J.K.M.1    Argos, P.2
  • 34
    • 0019771843 scopus 로고
    • Genes controlling early and late functions in symbiosis are located on a megaplasmid in Rhizobium meliloti
    • Rosenberg, C., P. Boistard, J. Dénarié, and F. Casse-Delbart. 1981. Genes controlling early and late functions in symbiosis are located on a megaplasmid in Rhizobium meliloti. Mol. Gen. Genet. 184:326-333.
    • (1981) Mol. Gen. Genet. , vol.184 , pp. 326-333
    • Rosenberg, C.1    Boistard, P.2    Dénarié, J.3    Casse-Delbart, F.4
  • 35
    • 0019365279 scopus 로고
    • A general method for site-directed mutagenesis in prokaryotes
    • Ruvkun, G. B., and F. M. Ausubel. 1981. A general method for site-directed mutagenesis in prokaryotes. Nature (London) 289:85-88
    • (1981) Nature (London) , vol.289 , pp. 85-88
    • Ruvkun, G.B.1    Ausubel, F.M.2
  • 38
    • 0025048136 scopus 로고
    • The P-loop - A common motif in ATP- and GTP-binding proteins
    • Saraste, M., P. R. Sibbald, and A. Wittinghofer. 1990. The P-loop - a common motif in ATP- and GTP-binding proteins. Trends Biochem. Sci. 15:430-434.
    • (1990) Trends Biochem. Sci. , vol.15 , pp. 430-434
    • Saraste, M.1    Sibbald, P.R.2    Wittinghofer, A.3
  • 40
    • 0016610995 scopus 로고
    • Determinant of cistron specificity in bacterial ribosomes
    • Shine, J., and L. Dalgarno. 1975. Determinant of cistron specificity in bacterial ribosomes. Nature (London) 254:34-38.
    • (1975) Nature (London) , vol.254 , pp. 34-38
    • Shine, J.1    Dalgarno, L.2
  • 41
    • 0020066233 scopus 로고
    • A rapid screening method for Rhizobium meliloti symbiotic nitrogenase activity
    • Sirois, J. C., and E. A. Peterson. 1982. A rapid screening method for Rhizobium meliloti symbiotic nitrogenase activity. Can. J. Microbiol 28:265-268.
    • (1982) Can. J. Microbiol , vol.28 , pp. 265-268
    • Sirois, J.C.1    Peterson, E.A.2
  • 42
    • 0022924812 scopus 로고
    • Symbiotic and free-living denitrification by Bradyrhizobium japonicum
    • Smith, G. B., and M. S. Smith. 1986. Symbiotic and free-living denitrification by Bradyrhizobium japonicum. Soil Sci. Soc. Am. J. 50:349-354.
    • (1986) Soil Sci. Soc. Am. J. , vol.50 , pp. 349-354
    • Smith, G.B.1    Smith, M.S.2
  • 43
    • 0026326008 scopus 로고
    • Electrophoretic separation of the three Rhizobium meliloti replicons
    • Sorbal, B. W. S., R. J. Honeycutt, A. G. Atherly, and M. McClelland. 1991. Electrophoretic separation of the three Rhizobium meliloti replicons. J. Bacteriol. 173:5173-5180
    • (1991) J. Bacteriol. , vol.173 , pp. 5173-5180
    • Sorbal, B.W.S.1    Honeycutt, R.J.2    Atherly, A.G.3    McClelland, M.4
  • 44
    • 0024989737 scopus 로고
    • FNR and its role in oxygen-regulated gene expression in Escherichia coli
    • Spiro, S., and J. R. Guest. 1990 FNR and its role in oxygen-regulated gene expression in Escherichia coli. FEMS Microbiol. Rev. 75:399-428.
    • (1990) FEMS Microbiol. Rev. , vol.75 , pp. 399-428
    • Spiro, S.1    Guest, J.R.2
  • 45
    • 0023424890 scopus 로고
    • Physical mapping of transposon Tn5 insertions defines a gene cluster functional in nitrous oxide respiration by Pseudomonas stutzeri
    • Viebrock, A., and W. G. Zumft. 1987. Physical mapping of transposon Tn5 insertions defines a gene cluster functional in nitrous oxide respiration by Pseudomonas stutzeri. J Bacteriol. 169:4577-4580.
    • (1987) J Bacteriol. , vol.169 , pp. 4577-4580
    • Viebrock, A.1    Zumft, W.G.2
  • 46
    • 0024095529 scopus 로고
    • Molecular cloning, heterologous expression, and primary structure of the structural gene for the copper enzyme nitrous oxide reductase from denitrifying Pseudomonas stutzeri
    • Viebrock, A., and W. G. Zumft. 1988. Molecular cloning, heterologous expression, and primary structure of the structural gene for the copper enzyme nitrous oxide reductase from denitrifying Pseudomonas stutzeri J. Bacteriol. 170:4658-4668.
    • (1988) J. Bacteriol. , vol.170 , pp. 4658-4668
    • Viebrock, A.1    Zumft, W.G.2
  • 47
    • 0023046815 scopus 로고
    • A new method for predicting signal sequence cleavage sites
    • von Heijne, G. 1986. A new method for predicting signal sequence cleavage sites. Nucleic Acids Res. 14:4683-4690.
    • (1986) Nucleic Acids Res. , vol.14 , pp. 4683-4690
    • Von Heijne, G.1
  • 48
    • 0025420305 scopus 로고
    • 4-dicarboxylate transport genes of Rhizobium meliloti nucleotide sequence and deduced products of dctA, dctB, and dctD
    • 4-dicarboxylate transport genes of Rhizobium meliloti nucleotide sequence and deduced products of dctA, dctB, and dctD. Mol. Plant-Microbe Interact 5:174-181.
    • (1990) Mol. Plant-Microbe Interact , vol.5 , pp. 174-181
    • Watson, R.J.1
  • 50
    • 0029129885 scopus 로고
    • Production and consumption of nitric oxide by denitrifying Flexibacter canadensIs
    • Wu, Q., R. Knowles, and Y.-K. Chan. 1995. Production and consumption of nitric oxide by denitrifying Flexibacter canadensIs. Can. J. Microbiol. 41:585-591.
    • (1995) Can. J. Microbiol. , vol.41 , pp. 585-591
    • Wu, Q.1    Knowles, R.2    Chan, Y.-K.3
  • 52
    • 0000266664 scopus 로고
    • The denitrifying prokaryotes
    • A. Balows H. G. Trüper, M. Dworkin, W. Harder, and K. H. Schleifer (ed.), Springer-Verlag, New York
    • Zumft, W. G. 1992. The denitrifying prokaryotes, p. 554-582. In A. Balows H. G. Trüper, M. Dworkin, W. Harder, and K. H. Schleifer (ed.), The prokaryotes, 2nd ed. Springer-Verlag, New York.
    • (1992) The Prokaryotes, 2nd Ed. , pp. 554-582
    • Zumft, W.G.1
  • 54
    • 0002231858 scopus 로고
    • Metabolism of nitrous oxide
    • N. P. Revsbech and J. Sørensen (ed.), Plenum Press, New York
    • Zumft, W. G., and P. M. H. Kroneck. 1990. Metabolism of nitrous oxide, p. 37-55. In N. P. Revsbech and J. Sørensen (ed.), Denitrification in soil and sediment. Plenum Press, New York.
    • (1990) Denitrification in Soil and Sediment , pp. 37-55
    • Zumft, W.G.1    Kroneck, P.M.H.2
  • 55
    • 0025039908 scopus 로고
    • Nitrous oxide reductase from denitrifying Pseudomonas stutzeri: Genes for copper-processing and properties of the deduced products, including a new member of the family of ATP/GTP-binding proteins
    • Zumft, W. G., A. Viebrock-Sambale, and C. Braun. 1990. Nitrous oxide reductase from denitrifying Pseudomonas stutzeri: genes for copper-processing and properties of the deduced products, including a new member of the family of ATP/GTP-binding proteins. Eur. J Biochem. 192:591-599
    • (1990) Eur. J Biochem. , vol.192 , pp. 591-599
    • Zumft, W.G.1    Viebrock-Sambale, A.2    Braun, C.3


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