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24
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13344249962
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note
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6 cells/ml). The cells were treated with recombinant human IL-1β (200 ng/ml, Genentech) for 3 min at 37°C and sedimented at 500g for 5 min at 4°C All subsequent steps were done at 4°C. Cells were suspended in five volumes of lysis buffer [50 mM Hepes (pH 7 9), 250 mM NaCl, 5 mM dithiothreitol (DTT), 1 mM EDTA, 20 mM β-glycerophosphate, 5 mM p-nitrophenyl phosphate, 1 mM sodium orthovanadate, 1 mM benzamidine, 0 4 mM phenylmethylsulfonyl fluoride (PMSF), 1 mM sodium metabisulfite. leupeptin (10 μg/ml), aprotinin (10 μg/ml), 0 1% NP-40, and 10% (v/v) glycerol] After incubation on ice for 30 min with occasional rocking, the cell lysate was centnfuged at 2000g for 10 min. Supernatants were collected and centrifuged at 125,000g for 2 hours Supernatants were stored at -70°C.
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25
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0016711037
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13344284136
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32P]ATP)]. The phosphorylation reaction was incubated at 30°C for 15 min and was then incubated with unlabeled ATP (100 μM) for 15 min. The protein A beads were collected and washed sequentially with 150 ml of wash buffer 1, 150 ml of wash buffer 2 [50 mM Hepes (pH 7.9), 1 M NaCl, 5 mM DTT, 1 mM EDTA, and 0.1% NP-40] and 150 ml of wash buffer 3 [50 mM Hepes (pH 7.9), 100 mM NaCl, 2 M urea, 5 mM DTT, 1 mM EDTA, and 0.1% NP-40)]. Proteins that remained bound were eluted with 50 ml of the elution buffer (buffer 3 with 7 M urea) overnight at 4°C with rocking. The eluted material was loaded onto a 0 5-ml Q Sepharose column. After they were washed extensively with the elution buffer, proteins bound (including pp100) were eluted with 1.5 ml of the elution buffer with 0.5 M NaCl. The eluate was concentrated in a Microcon 50 (Amicon) to 50 μl, diluted with 1 ml of isoelectrofocusing sample buffer (15), concentrated again to 50 μl, and then subjected to 2D gel electrophoresis.
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13344258821
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note
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The IRAK coding sequence was inserted in a bacterial T7 expression vector pRSETA (Invitrogen), in fusion with a sequence encoding a polyhistidine tag. Recombinant IRAK was made in Escherichia coli strain BL21 induced with 1 mM isopropyl-β-D-thiogalactopyranoside, and then purified under denaturing conditions on a nickel column (Qiagen) Purified protein was used for generating antibodies in rabbits (Zymed)
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13344281212
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Cells were collected by centrifugation in 5 ml of phosphate-buffered saline with 1 mM EDTA, washed once with medium (10 ml), sedimented, resuspended in 1 ml of medium, and transferred to 1.5-ml microtubes. IL-1β (200 ng/ml) was added to the tubes, followed by incubation at 37°C for the indicated time. The cells were collected by centrifugation and then lysed with 1 ml of lysis buffer (14). After incubation on ice for 30 min, the cell debris was sedimented in a microcentrifuge and discarded. The IL-1RI complexes were immunoprecipitated (12), resolved by SDS-PAGE, and transferred to nitrocellulose membrane, which were blotted with antiserum to IRAK.
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40
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13344282256
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note
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2-terminal regions of IRAK and Pelle, A. Ashkenazi for providing IL-1 RI expression plasmids; A. Bothwell for pNeoSRαII, K. Williamson for nucleotide sequencing; L Xu and S. Wong for technical support; and V. Balchwal, M. Rothe, and U. Schindler for critical review of the manuscript.
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