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Volumn 250, Issue 4, 1996, Pages 466-476

Differential mRNA decay within the transfer operon of plasmid R1: Identification and analysis of an intracistronic mRNA stabilizer

Author keywords

differential mRNA stability; gene expression; mRNA processing; plasmid R1; traA mRNA

Indexed keywords

MESSENGER RNA;

EID: 0029864068     PISSN: 00268925     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF02174035     Document Type: Article
Times cited : (7)

References (55)
  • 2
    • 0028711703 scopus 로고
    • Control of mRNA processing and decay in prokaryotes
    • Alifano P, Bruni CB, Carlomagno MS (1994) Control of mRNA processing and decay in prokaryotes. Genetica 94:157-172
    • (1994) Genetica , vol.94 , pp. 157-172
    • Alifano, P.1    Bruni, C.B.2    Carlomagno, M.S.3
  • 3
    • 0027024023 scopus 로고
    • pBluescriptII: Multifunctional cloning and mapping vectors
    • Alting-Mees MA, Sorge JA, Short JM (1992) pBluescriptII: multifunctional cloning and mapping vectors. Methods Enzymol 216:483-495
    • (1992) Methods Enzymol , vol.216 , pp. 483-495
    • Alting-Mees, M.A.1    Sorge, J.A.2    Short, J.M.3
  • 4
    • 0021019879 scopus 로고
    • Vectors bearing a hybrid trp-lac promoter useful for regulated expression of cloned genes in Escherichia coli
    • Amann E, Brosius J, Ptashne M (1983) Vectors bearing a hybrid trp-lac promoter useful for regulated expression of cloned genes in Escherichia coli. Gene 25:167-178
    • (1983) Gene , vol.25 , pp. 167-178
    • Amann, E.1    Brosius, J.2    Ptashne, M.3
  • 6
    • 0024299148 scopus 로고
    • Processed mRNA with differential stability in the regulation of E. coli pilin gene expression
    • Båga M, Goeransson M, Normark S, Uhlin BE (1988) Processed mRNA with differential stability in the regulation of E. coli pilin gene expression. Cell 52:197-206
    • (1988) Cell , vol.52 , pp. 197-206
    • Båga, M.1    Goeransson, M.2    Normark, S.3    Uhlin, B.E.4
  • 7
    • 0024244201 scopus 로고
    • Mechanisms of mRNA decay in bacteria: A perspective
    • Belasco JG, Higgins CF (1988) Mechanisms of mRNA decay in bacteria: a perspective. Gene 72:15-23
    • (1988) Gene , vol.72 , pp. 15-23
    • Belasco, J.G.1    Higgins, C.F.2
  • 9
    • 0021978242 scopus 로고
    • Differential expression of photosynthesis genes in R. capsulata results from segmental differences in stability within the polycistronic rxcA transcript
    • Belasco JG, Beatty JT, Adams CW, von Gabain A, Cohen SN (1985) Differential expression of photosynthesis genes in R. capsulata results from segmental differences in stability within the polycistronic rxcA transcript. Cell 40:171-181
    • (1985) Cell , vol.40 , pp. 171-181
    • Belasco, J.G.1    Beatty, J.T.2    Adams, C.W.3    Von Gabain, A.4    Cohen, S.N.5
  • 10
    • 0014674485 scopus 로고
    • A complementation analysis of the restriction and modification of DNA in Escherichia coli
    • Boyer HW, Roulland-Dussoix D (1969) A complementation analysis of the restriction and modification of DNA in Escherichia coli. J Mol Biol 42:459-472
    • (1969) J Mol Biol , vol.42 , pp. 459-472
    • Boyer, H.W.1    Roulland-Dussoix, D.2
  • 12
    • 0027167479 scopus 로고
    • Mutational analysis of segmental stabilization of transcripts from the Zymomonas mobilis gap-pgk operon
    • Burchhardt G, Keshav KF, Yomano L, Ingram LO (1993) Mutational analysis of segmental stabilization of transcripts from the Zymomonas mobilis gap-pgk operon. J Bacteriol 175:2327-2333
    • (1993) J Bacteriol , vol.175 , pp. 2327-2333
    • Burchhardt, G.1    Keshav, K.F.2    Yomano, L.3    Ingram, L.O.4
  • 13
    • 0028171564 scopus 로고
    • mRNA degradation in Escherichia coli: A novel factor which impedes the exoribonucleolytic activity of PNPase at stem-loop structures
    • Causton H, Py B, McLaren RS, Higgins CF (1994) mRNA degradation in Escherichia coli: a novel factor which impedes the exoribonucleolytic activity of PNPase at stem-loop structures. Mol Microbiol 14:731-741
    • (1994) Mol Microbiol , vol.14 , pp. 731-741
    • Causton, H.1    Py, B.2    McLaren, R.S.3    Higgins, C.F.4
  • 14
    • 0017807890 scopus 로고
    • Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the p15A cryptic miniplasmid
    • Chang ACY, Cohen SN (1978) Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the p15A cryptic miniplasmid. J Bacteriol 134:1141-1156
    • (1978) J Bacteriol , vol.134 , pp. 1141-1156
    • Chang, A.C.Y.1    Cohen, S.N.2
  • 15
    • 0028341741 scopus 로고
    • Coupling between mRNA synthesis and mRNA stability in Escherichia coli
    • Chow J, Dennis PP (1994) Coupling between mRNA synthesis and mRNA stability in Escherichia coli. Mol Microbiol 11:919-931
    • (1994) Mol Microbiol , vol.11 , pp. 919-931
    • Chow, J.1    Dennis, P.P.2
  • 16
    • 0026559344 scopus 로고
    • Specificity of Escherichia coli endoribonuclease RNase E: In vivo and in vitro analysis of mutants in a bacteriophage T4 mRNA processing site
    • Ehretsmann CP, Carpousis AJ, Krisch HM (1992a) Specificity of Escherichia coli endoribonuclease RNase E: in vivo and in vitro analysis of mutants in a bacteriophage T4 mRNA processing site. Genes Dev 6:149-159
    • (1992) Genes Dev , vol.6 , pp. 149-159
    • Ehretsmann, C.P.1    Carpousis, A.J.2    Krisch, H.M.3
  • 18
    • 0015854977 scopus 로고
    • Solubilization of the cytoplasmic membrane of Escherichia coli by the ionic detergent sodium-lauryl sarcosinate
    • Filip C, Fletcher G, Wulff JL, Earhart CF (1973) Solubilization of the cytoplasmic membrane of Escherichia coli by the ionic detergent sodium-lauryl sarcosinate. J Bacteriol 115:717-722
    • (1973) J Bacteriol , vol.115 , pp. 717-722
    • Filip, C.1    Fletcher, G.2    Wulff, J.L.3    Earhart, C.F.4
  • 19
    • 0022870839 scopus 로고
    • Molecular cloning of the plasmid RP4 primase region in a multi-host-range tacP expression vector
    • Fürste JP, Pansegrau W, Frank R, Blöcker H, Scholz P, Bagdasarian M, Lanka E (1986) Molecular cloning of the plasmid RP4 primase region in a multi-host-range tacP expression vector. Gene 48:119-131
    • (1986) Gene , vol.48 , pp. 119-131
    • Fürste, J.P.1    Pansegrau, W.2    Frank, R.3    Blöcker, H.4    Scholz, P.5    Bagdasarian, M.6    Lanka, E.7
  • 21
    • 0003648123 scopus 로고
    • April 1991. 575 Science Drive, Madison, Wisconsin 53711, USA
    • Genetics Computer Group (1991) Program Manual for the GCG Package, Version 7, April 1991. 575 Science Drive, Madison, Wisconsin 53711, USA
    • (1991) Program Manual for the GCG Package, Version 7
  • 22
    • 0026733629 scopus 로고
    • Decay of ompA mRNA and processing of 9S RNA are immediately affected by shifts in growth rate, but in opposite manners
    • Georgellis D, Arbidson S, von Gabain A (1992) Decay of ompA mRNA and processing of 9S RNA are immediately affected by shifts in growth rate, but in opposite manners. J Bacteriol 174:5382-5390
    • (1992) J Bacteriol , vol.174 , pp. 5382-5390
    • Georgellis, D.1    Arbidson, S.2    Von Gabain, A.3
  • 24
    • 0026934262 scopus 로고
    • Turnover of mRNA in prokaryotes and lower eukaryotes
    • Higgins CF, Peltz SW, Jacobson A (1992) Turnover of mRNA in prokaryotes and lower eukaryotes. Curr Opin Gen Dev 2:739-747
    • (1992) Curr Opin Gen Dev , vol.2 , pp. 739-747
    • Higgins, C.F.1    Peltz, S.W.2    Jacobson, A.3
  • 25
    • 0002404647 scopus 로고
    • The role of the 3′ end in mRNA stability and decay
    • Belasco J, Brawerman G (eds) Academic Press, San Diego
    • Higgins CF, Causton HC, Dance GSC, Mudd E (1993) The role of the 3′ end in mRNA stability and decay. In: Belasco J, Brawerman G (eds) Control of messenger RNA stability. Academic Press, San Diego, pp 13-30
    • (1993) Control of Messenger RNA Stability , pp. 13-30
    • Higgins, C.F.1    Causton, H.C.2    Dance, G.S.C.3    Mudd, E.4
  • 26
    • 0025250376 scopus 로고
    • Specific binding of the TraY protein to oriT and the promoter region for the traY gene of plasmid R100
    • Inamoto S, Ohtsubo E (1990) Specific binding of the TraY protein to oriT and the promoter region for the traY gene of plasmid R100. J Biol Chem 265:6461-6466
    • (1990) J Biol Chem , vol.265 , pp. 6461-6466
    • Inamoto, S.1    Ohtsubo, E.2
  • 27
    • 0027996760 scopus 로고
    • mRNAs can be stabilized by DEAD box proteins
    • Iost I, Dreyfus M (1994) mRNAs can be stabilized by DEAD box proteins. Nature 372:193-196
    • (1994) Nature , vol.372 , pp. 193-196
    • Iost, I.1    Dreyfus, M.2
  • 28
    • 0028200971 scopus 로고
    • Promiscuous DNA transfer system of Agrobacterium tumefaciens: Role of the virB operon in sex pilus assembly and synthesis
    • Kado C (1994) Promiscuous DNA transfer system of Agrobacterium tumefaciens: role of the virB operon in sex pilus assembly and synthesis. Mol Microbiol 12:17-22
    • (1994) Mol Microbiol , vol.12 , pp. 17-22
    • Kado, C.1
  • 29
    • 0027182142 scopus 로고
    • The role of mRNA degradation in the regulated expression of bacterial photosynthesis genes
    • Klug G (1993) The role of mRNA degradation in the regulated expression of bacterial photosynthesis genes. Mol Microbiol 9:1-7
    • (1993) Mol Microbiol , vol.9 , pp. 1-7
    • Klug, G.1
  • 30
    • 0024978041 scopus 로고
    • A stable core region of the tra operon mRNA of plasmid R1-19
    • Koraimann G, Högenauer G (1989) A stable core region of the tra operon mRNA of plasmid R1-19. Nucleic Acids Res 17: 1283-1298
    • (1989) Nucleic Acids Res , vol.17 , pp. 1283-1298
    • Koraimann, G.1    Högenauer, G.2
  • 32
    • 0021191239 scopus 로고
    • Promotion, termination, and anti-termination in the rpsU-dnaG-rpoD macromolecular synthesis operon of E. coli K-12
    • Lupski JR, Altaba Ruiz A, Godson GN (1984) Promotion, termination, and anti-termination in the rpsU-dnaG-rpoD macromolecular synthesis operon of E. coli K-12. Mol Gen Genet 195:391-401
    • (1984) Mol Gen Genet , vol.195 , pp. 391-401
    • Lupski, J.R.1    Altaba Ruiz, A.2    Godson, G.N.3
  • 33
    • 0028276973 scopus 로고
    • Effects of nucleotide sequence on the specificity of rne-dependent and RNase E-mediated cleavages of RNA I encoded by the pBR322 plasmid
    • Lin-Chao S, Wong T-T, McDowall KJ, Cohen SN (1994) Effects of nucleotide sequence on the specificity of rne-dependent and RNase E-mediated cleavages of RNA I encoded by the pBR322 plasmid. J Biol Chem 269:10797-10803
    • (1994) J Biol Chem , vol.269 , pp. 10797-10803
    • Lin-Chao, S.1    Wong, T.-T.2    McDowall, K.J.3    Cohen, S.N.4
  • 34
    • 0025796969 scopus 로고
    • Specific endonucleolytic cleavage of the mRNA for ribosomal protein S20 of Escherichia coli requires the product of the ams gene in vivo and in vitro
    • Mackie GA (1991) Specific endonucleolytic cleavage of the mRNA for ribosomal protein S20 of Escherichia coli requires the product of the ams gene in vivo and in vitro. J Bacteriol 173:2488-2497
    • (1991) J Bacteriol , vol.173 , pp. 2488-2497
    • Mackie, G.A.1
  • 35
    • 0026557264 scopus 로고
    • Secondary structure of the mRNA for ribosomal protein S20
    • Mackie GA (1992) Secondary structure of the mRNA for ribosomal protein S20. J Biol Chem 267:1054-1061
    • (1992) J Biol Chem , vol.267 , pp. 1054-1061
    • Mackie, G.A.1
  • 36
    • 0027717298 scopus 로고
    • The role of RNA structure in determining RNase E-dependent cleavage sites in the mRNA for ribosomal protein S20 in vitro
    • Mackie GA, Genereaux JL (1993) The role of RNA structure in determining RNase E-dependent cleavage sites in the mRNA for ribosomal protein S20 in vitro. J Mol Biol 234:998-1012
    • (1993) J Mol Biol , vol.234 , pp. 998-1012
    • Mackie, G.A.1    Genereaux, J.L.2
  • 38
    • 0025955510 scopus 로고
    • Differential gene expression from the Escherichia coli atp operon mediated by segmental differences in mRNA stability
    • McCarthy JEG, Gerstel B, Surin B, Wiedemann U, Ziemke P (1991) Differential gene expression from the Escherichia coli atp operon mediated by segmental differences in mRNA stability. Mol Microbiol 5:2447-2458
    • (1991) Mol Microbiol , vol.5 , pp. 2447-2458
    • McCarthy, J.E.G.1    Gerstel, B.2    Surin, B.3    Wiedemann, U.4    Ziemke, P.5
  • 39
    • 0028341449 scopus 로고
    • A + U content rather than a particular nucleotide order determines the specificity of RNase E cleavage
    • McDowall KJ, Lin-Chao S, Cohen SN (1994) A + U content rather than a particular nucleotide order determines the specificity of RNase E cleavage. J Biol Chem 269:10790-10796
    • (1994) J Biol Chem , vol.269 , pp. 10790-10796
    • McDowall, K.J.1    Lin-Chao, S.2    Cohen, S.N.3
  • 41
    • 0026593564 scopus 로고
    • Characterization of cat messenger RNA decay suggests that turnover occurs by endonucleolytic cleavage in a 3′ to 5′ direction
    • Meyer BJ, Schottel JL (1992) Characterization of cat messenger RNA decay suggests that turnover occurs by endonucleolytic cleavage in a 3′ to 5′ direction. Mol Microbiol 6:1095-1104
    • (1992) Mol Microbiol , vol.6 , pp. 1095-1104
    • Meyer, B.J.1    Schottel, J.L.2
  • 42
    • 0014218409 scopus 로고
    • Mutant drug resistant factors of high transmissibility
    • Meynell E, Datta N (1967) Mutant drug resistant factors of high transmissibility Nature 214:885-887
    • (1967) Nature , vol.214 , pp. 885-887
    • Meynell, E.1    Datta, N.2
  • 43
    • 0026004137 scopus 로고
    • Transcription and decay of the lac messenger: Role of an intergenic terminator
    • Murakawa GJ, Kwan C, Yamashita J, Nierlich DP (1991) Transcription and decay of the lac messenger: role of an intergenic terminator. J Bacteriol 173:28-36
    • (1991) J Bacteriol , vol.173 , pp. 28-36
    • Murakawa, G.J.1    Kwan, C.2    Yamashita, J.3    Nierlich, D.P.4
  • 44
    • 0023663908 scopus 로고
    • Differential mRNA stability controls relative gene expression within a polycistronic operon
    • Newbury SF, Smith NH, Higgins CF (1987) Differential mRNA stability controls relative gene expression within a polycistronic operon. Cell 51:1131-1143
    • (1987) Cell , vol.51 , pp. 1131-1143
    • Newbury, S.F.1    Smith, N.H.2    Higgins, C.F.3
  • 45
    • 0025816349 scopus 로고
    • Differential decay of a polycistronic Escherichia coli transcript is initiated by RNase E-dependent endonucleolytic processing
    • Nilsson P, Uhlin BE (1991) Differential decay of a polycistronic Escherichia coli transcript is initiated by RNase E-dependent endonucleolytic processing. Mol Microbiol 5:1791-1799
    • (1991) Mol Microbiol , vol.5 , pp. 1791-1799
    • Nilsson, P.1    Uhlin, B.E.2
  • 46
    • 0021202461 scopus 로고
    • Growth-rate dependent regulation of mRNA stability in Escherichia coli
    • Nilsson G, Belasco JG, Cohen SN, von Gabain A (1984) Growth-rate dependent regulation of mRNA stability in Escherichia coli. Nature 312:75-77
    • (1984) Nature , vol.312 , pp. 75-77
    • Nilsson, G.1    Belasco, J.G.2    Cohen, S.N.3    Von Gabain, A.4
  • 47
    • 0025772809 scopus 로고
    • Simultaneous quantification of several mRNA species by solution hybridization with oligonucleotides
    • O'Donovan MC, Buckland PR, McGuffin P (1991) Simultaneous quantification of several mRNA species by solution hybridization with oligonucleotides. Nucleic Acids Res 19:3466
    • (1991) Nucleic Acids Res , vol.19 , pp. 3466
    • O'Donovan, M.C.1    Buckland, P.R.2    McGuffin, P.3
  • 49
    • 0026077462 scopus 로고
    • Analysis of the complex transcription termination region of the Escherichia coli rrnB gene
    • Orosz A, Boros I, Venetianer P (1991) Analysis of the complex transcription termination region of the Escherichia coli rrnB gene. Eur J Biochem 201:653-659
    • (1991) Eur J Biochem , vol.201 , pp. 653-659
    • Orosz, A.1    Boros, I.2    Venetianer, P.3
  • 50
    • 0018175833 scopus 로고
    • Functional mRNA half lives in E. coli
    • Pedersen S, Reeh S (1978) Functional mRNA half lives in E. coli. Mol Gen Genet 166:329-336
    • (1978) Mol Gen Genet , vol.166 , pp. 329-336
    • Pedersen, S.1    Reeh, S.2
  • 51
    • 0026564641 scopus 로고
    • Control of functional mRNA stability in bacteria: Multiple mechanisms of nucleolytic and non-nucleolytic inactivation
    • Petersen C (1992) Control of functional mRNA stability in bacteria: multiple mechanisms of nucleolytic and non-nucleolytic inactivation. Mol Microbiol 6:277-282
    • (1992) Mol Microbiol , vol.6 , pp. 277-282
    • Petersen, C.1
  • 52
    • 0025062597 scopus 로고
    • E. coli glyA mRNA decay: The role of 3′ secondary structure and the effects of the pnp and rnb mutations
    • Plamann MD, Stauffer GV (1990) E. coli glyA mRNA decay: the role of 3′ secondary structure and the effects of the pnp and rnb mutations. Mol Gen Genet 220:301-306
    • (1990) Mol Gen Genet , vol.220 , pp. 301-306
    • Plamann, M.D.1    Stauffer, G.V.2
  • 54
    • 0023795111 scopus 로고
    • Improved cat gene cassettes for promoter analysis and genetic constructions
    • Shiau A, Smith HM (1988) Improved cat gene cassettes for promoter analysis and genetic constructions. Gene 67:295-299
    • (1988) Gene , vol.67 , pp. 295-299
    • Shiau, A.1    Smith, H.M.2
  • 55
    • 0023634094 scopus 로고
    • Production of single-stranded plasmid DNA
    • Vieira J, Messing J (1988) Production of single-stranded plasmid DNA. Methods Enzymol 153:3-11
    • (1988) Methods Enzymol , vol.153 , pp. 3-11
    • Vieira, J.1    Messing, J.2


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