Immunity specificity determinants in the P4-like retronphage φR73

Virology

Volumn 216, Issue 2, 1996, Pages 389-396

  Sabbattini, Pierangela ^a,c   Six, Erich ^b   Zangrossi, Sandro ^a   Briani, Federica ^a   Ghisotti, Daniela ^a   Dehò, Gianni ^a  

^a UNIVERSITY OF MILAN   (Italy)

^b UNIVERSITY OF IOWA   (United States)

^c HAMMERSMITH HOSPITAL   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

RNA DIRECTED DNA POLYMERASE;

ARTICLE; BACTERIOPHAGE; CONTROLLED STUDY; DNA SYNTHESIS; GRAM NEGATIVE BACTERIUM; IMMUNITY; NONHUMAN; PRIORITY JOURNAL; PROPHAGE; RNA SEQUENCE;

BACTERIA (MICROORGANISMS); NEGIBACTERIA;

EID: 0029863629     PISSN: 00426822     EISSN: None     Source Type: Journal    
DOI: 10.1006/viro.1996.0074     Document Type: Article

References (31)

1. Adams, M. H. (1959). "Bacteriophages." Interscience Publishers, New York.
2. Bertani, G., and Six, E. W. (1958). Inheritance of prophage P2 in bacterial crosses. Virology 6, 357-381.
3. Bertani, G., Choe, B. K., and Lindahl, G. (1969). Calcium sensitive and other mutants of bacteriophage P2. J. Gen. Virol. 5, 97-104.
4. Chattoraj, D. K., and Inman, R. B. (1972). Position of two deletion mutations on the physical map of bacteriophage P2. J. Mol. Biol. 66, 423-434.
5. Dale, E. C., Christie, G. E., and Calendar, R. (1986). Organization and expression of the satellite bacteriophage P4 late gene cluster. J. Mol. Biol. 192, 793-803.
6. Dehò, G. (1983). Circular genetic map of satellite bacteriophage P4. Virology 126, 267-278.
7. Dehò, G., Zangrossi, S., Ghisotti, D., and Sironi, G. (1988). Alternative promoters in the development of bacteriophage plasmid P4. J. Virol. 6, 1697-1704.
8. Deho, G., Zangrossi, S., Sabbattini, P., Sironi, G., and Ghisotti, D. (1992). Bacteriophage P4 immunity controlled by small RNAs via transcription termination. Mol. Microbiol. 6, 3415-3425.
9. Forti, F., Sabbattini, P., Sironi, G., Zangrossi, S., Dehò, G., and Ghisotti, D. (1995). The immunity determinant of page-plasmid P4 is a short processed RNA. J. Mol. Biol. 249, 869-878.
10. Furuichi, T., Dhundale, A., Inouye, M., and Inouye, S. (1987). Branched RNA covalently linked to the 5′ end of a single-stranded DNA in Stigmatella aurantiaca: Structure of msDNA. Cell 48, 47-53.
11. Geisselsoder, J., Youdarian, P., Dehò, G., Chidambaram, M., Goldstein, M., and Liungquist, E. (1981). Mutants of satellite virus P4 that cannot derepress their bacteriophage P2 helper. J. Mol. Biol. 148, 1-19.
12. Ghisotti, D., Chiaramonte, R., Forti, F., Sironi, G., and Dehò, G. (1992). Genetic analysis of the immunity region of phage-plasmid P4. Mol. Microbiol. 6, 3405-3413.
13. Ghisotti, D., Briani, F., Forti, F., Piazza, F., Polo, S., Sabbattini, P., Sturniolo, T., Terzano, S., Zangrossi, S., Zappone, M., Sironi, G., and Dehò, G. (1995). Multiple regulatory mechanisms controlling phage-plasmid P4 propagation. FEMS Microbiol. Rev. 17, 127-134.
14. Halling, C., Calendar, R., Christie, G. E., Dale, E. C., Dehò, G., Finkel, S., Flensburg, J., Ghisotti, D., Kahn, M. L., Lane, K. L., Lin, C. S., Lindqvist, B. H., Pierson, L. S., III, Six, E. W., Sunshine, M. G., and Ziermann, R. (1990). DNA sequence of satellite bacteriophage P4. Nucleic Acids Res. 18, 1649.
15. Hsu, M. Y., Inouye, M., and Inouye, S. (1990). Retron for the 67-base multicopy single-stranded DNA from Escherichia coli: A potential transposable element encoding both reverse transcriptase and Dam methylase functions. Proc. Natl. Acad. Sci. USA 87, 9454-9458.
16. Inouye, S., Sunshine, M. G., Six, E. W., and Inouye, M. (1991). Retronphage φR73: An E. coli phage that contains a retroelement and integrates into a tRNA gene. Science 252, 969-971.
17. Inouye, S., and Inouye, M. (1993). The retron: A bacterial retroelement required for the synthesis of msDNA. Curr. Opin. Genet. Dev. 3, 713-718.
18. Jesaitis, M. A., and Hutton, J. J. (1963). Properties of a bacteriophage derived from Escherichia coli K-235. J. Exp. Med. 117, 285-302.
19. Julien, B. (1994). "Studies of Transcriptional Activators: Bacteriophages P4 and φR73 δ Proteins and Pag from Phage PSP3." PhD thesis, University of California, Berkeley.
20. Lim, D., and Maas, W. K. (1990). Mapping of the msDNA operon in the chromosome of Escherichia coli B. Mol. Microbiol. 4, 2201-2204.
21. Lin, C. S. (1984). Nucleotide sequence of the essential region of bacteriophage P4. Nucleic Acids Res. 12, 8667-8684.
22. Lindqvist, B. H., Dehò, G., and Calendar, R. (1993). Mechanisms of genome propagation and helper exploitation by satellite phage P4. Microbiol. Rev. 57, 683-702.
23. Sabbattini, P., Forti, F., Ghisotti, D., and Dehò, G. (1995). Control of transcription termination by an RNA factor in bacteriophage P4 immunity: Identification of the target sites. J. Bacteriol. 177, 1425-1434.
24. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989). "Molecular Cloning: A Laboratory Manual." Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
25. Sasaki, I., and Bertani, G. (1965). Growth abnormalities in Hfr derivatives of Escherichia coli strain C. J. Gen. Microbiol. 40, 365-376.
26. Simons, R. W., and Kleckner, N. (1988). Biological regulation by anti-sense RNA in prokaryotes. Ann. Rev. Genet. 22, 576-600.
27. Six, E. W., and Klug, C. A. C. (1973). Bacteriophage P4: A satellite virus depending on a helper such as P2. Virology 51, 327-344.
28. Souza, L., Calendar, R., Six, E. W., and Lindqvist, B. H. (1977). A transactivation mutant of satellite phage P4. Virology 81, 81-90.
29. Studier, F. W., and Moffatt, B. A. (1986). Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes. J. Mol. Biol. 189, 113-130.
30. Sun, J., Inouye, M., and Inouye, S. (1991). Association of a retroelement with a P4-like cryptic prophage (retronphage φR73) integrated into the selenocystyl tRNA gene of Escherichia coli. J. Bacteriol. 173, 4171-4181.
31. Yee, T., Furuichi, T., Inouye, S., and Inouye, M. (1984). Multicopy single-stranded DNA isolated from a gram-negative bacterium, Myxococcus xanthus. Cell 38, 203-209.