메뉴 건너뛰기




Volumn 70, Issue 5, 1996, Pages 2341-2351

Fluorescence anisotropy of DNA/DAPI complex: Torsional dynamics and geometry of the complex

Author keywords

[No Author keywords available]

Indexed keywords

4',6 DIAMIDINO 2 PHENYLINDOLE; DNA; POLYDEOXYRIBONUCLEOTIDE;

EID: 0029863410     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(96)79800-4     Document Type: Article
Times cited : (14)

References (35)
  • 1
    • 0002291771 scopus 로고
    • Torsion dynamics and depolarization of fluorescence of linear macromolecules. I. Theory and application to DNA
    • Allison, S. A., and J. M. Schurr. 1979. Torsion dynamics and depolarization of fluorescence of linear macromolecules. I. Theory and application to DNA. Chem. Phys. 41:35-44.
    • (1979) Chem. Phys. , vol.41 , pp. 35-44
    • Allison, S.A.1    Schurr, J.M.2
  • 2
    • 0025194965 scopus 로고
    • The fluorescence properties of a DNA probe: 4′,6-diamidine-2-phenylmdole (DAPI)
    • Barcellona, M. L., and E. Gratton. 1990. The fluorescence properties of a DNA probe: 4′,6-diamidine-2-phenylmdole (DAPI). Eur. Biophys. 17: 315-323.
    • (1990) Eur. Biophys. , vol.17 , pp. 315-323
    • Barcellona, M.L.1    Gratton, E.2
  • 3
    • 9244237507 scopus 로고
    • Evidence for fluorescence energy homo-transfer occurring in DNA/DAPI complexes
    • Barcellona, M. L., and E. Gratton. 1993. Evidence for fluorescence energy homo-transfer occurring in DNA/DAPI complexes. Med. Biol Environ. 21:572-578.
    • (1993) Med. Biol Environ. , vol.21 , pp. 572-578
    • Barcellona, M.L.1    Gratton, E.2
  • 4
    • 9244258515 scopus 로고
    • DNA torsional dynamics and solution structure of DNA-4′,6-diamidino-2-phenylindole (DAPI) complexes
    • submitted
    • Barcellona, M. L., and E. Gratton. 1995. DNA torsional dynamics and solution structure of DNA-4′,6-diamidino-2-phenylindole (DAPI) complexes. Biochemistry. (submitted).
    • (1995) Biochemistry
    • Barcellona, M.L.1    Gratton, E.2
  • 5
    • 0006062144 scopus 로고
    • A time-resolved fluorescence study of 4′,6′-diamidine-2-phenylindole dihydro-chloride binding to polynucleotides
    • Cavatorta, P., L Masotti, and A. G. Szabo. 1985. A time-resolved fluorescence study of 4′,6′-diamidine-2-phenylindole dihydro-chloride binding to polynucleotides. Biophys. Chem. 22:11-16.
    • (1985) Biophys. Chem. , vol.22 , pp. 11-16
    • Cavatorta, P.1    Masotti, L.2    Szabo, A.G.3
  • 6
    • 0027394243 scopus 로고
    • Observing the helical geometry of double-stranded DNA in solution by fluorescence resonance energy-transfer
    • Clegg, R. M., A. I. M. Murchie, A. Zechel, and D. M. J. Lilley. 1993. Observing the helical geometry of double-stranded DNA in solution by fluorescence resonance energy-transfer. Proc. Natl. Acad. Sci. USA. 90:2994-2998.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 2994-2998
    • Clegg, R.M.1    Murchie, A.I.M.2    Zechel, A.3    Lilley, D.M.J.4
  • 7
    • 0026955819 scopus 로고
    • DNA torsion dynamics by multifrequency phase fluorometry
    • Collini, M., G. Chirico, and G. Baldini. 1992. DNA torsion dynamics by multifrequency phase fluorometry. Biopolymers. 32:1447-1459.
    • (1992) Biopolymers , vol.32 , pp. 1447-1459
    • Collini, M.1    Chirico, G.2    Baldini, G.3
  • 8
    • 0019275143 scopus 로고
    • Interaction of netropsin and dystamiacin with deoxyribonucleic acids. electric dichroism study
    • Dattagupta, N., M. Hogan, and D. M. Crothers. 1980. Interaction of netropsin and dystamiacin with deoxyribonucleic acids. electric dichroism study. Biochemistry. 19:5998-6005.
    • (1980) Biochemistry , vol.19 , pp. 5998-6005
    • Dattagupta, N.1    Hogan, M.2    Crothers, D.M.3
  • 9
    • 0027535529 scopus 로고
    • Binding of 4′,6-diamidino-2-phenylindole (DAPI) to at regions of DNA: Evidence for an allosteric conformational change
    • Eriksson, S., S. K. Kim, M. Kubista, and B. Norden. 1993. Binding of 4′,6-diamidino-2-phenylindole (DAPI) to AT regions of DNA: evidence for an allosteric conformational change. Biochemistry. 32:2987-2998
    • (1993) Biochemistry , vol.32 , pp. 2987-2998
    • Eriksson, S.1    Kim, S.K.2    Kubista, M.3    Norden, B.4
  • 10
    • 9244255744 scopus 로고
    • Fluorescenz organischer, Verbindungen. Gottingen
    • Förster, T. 1951. Energy transfer. Fluorescenz organischer, Verbindungen. Gottingen 22:61-83.
    • (1951) Energy Transfer , vol.22 , pp. 61-83
    • Förster, T.1
  • 11
    • 0017894357 scopus 로고
    • Pulse fluonmetry study in polarized light of DNA-ethidium bromide complexes
    • Genest, D., and Ph. Wahl. 1978. Pulse fluonmetry study in polarized light of DNA-ethidium bromide complexes. Biophys. Chem. 7:317-323.
    • (1978) Biophys. Chem. , vol.7 , pp. 317-323
    • Genest, D.1    Wahl, Ph.2
  • 12
    • 0020717114 scopus 로고
    • Microprocessor-controlled photon-counting spectrofluorometer
    • Gratton, E., and M. Limkeman. 1983. Microprocessor-controlled photon-counting spectrofluorometer. Rev. Sci. Instrum. 54:294-299.
    • (1983) Rev. Sci. Instrum. , vol.54 , pp. 294-299
    • Gratton, E.1    Limkeman, M.2
  • 13
    • 0027313411 scopus 로고
    • Binding of DAPI analogue 2,5-bis(4-amidinophenyl) furan to DNA
    • Jansen, K., P. Lincoln, and B. Norden. 1993. Binding of DAPI analogue 2,5-bis(4-amidinophenyl) furan to DNA. Biochemisiry. 32:6605-6612.
    • (1993) Biochemisiry , vol.32 , pp. 6605-6612
    • Jansen, K.1    Lincoln, P.2    Norden, B.3
  • 14
    • 0018172688 scopus 로고
    • Fluorescent complex of DNA with 4′,6-diamidino-2-phenylmdole-2HCl (DAPI) or 4′-6-dicarboxyamide-2-phenylindole (DCI)
    • Kapuscinski, J., and B. Skoczylas. 1978. Fluorescent complex of DNA with 4′,6-diamidino-2-phenylmdole-2HCl (DAPI) or 4′-6-dicarboxyamide-2-phenylindole (DCI). Nucleic Acids Res. 5.3775-3799.
    • (1978) Nucleic Acids Res. , vol.5 , pp. 3775-3799
    • Kapuscinski, J.1    Skoczylas, B.2
  • 15
    • 0018787112 scopus 로고
    • Interactions of 4′,6′-diarmdine-2-phenylmdole dihydrochloride with synthetic polynucleotides
    • Kapuscinski, J., and W. Szer. 1979. Interactions of 4′,6′-diarmdine-2-phenylmdole dihydrochloride with synthetic polynucleotides. Nucleic Acids Res. 6:3519-3534.
    • (1979) Nucleic Acids Res. , vol.6 , pp. 3519-3534
    • Kapuscinski, J.1    Szer, W.2
  • 16
    • 0023653157 scopus 로고
    • Characterization of interaction between DNA and 4′,6-diamidino-2-phenylindole by optical spectroscopy
    • Kubista, M., B. Akerman, and B Norden. 1987. Characterization of interaction between DNA and 4′,6-diamidino-2-phenylindole by optical spectroscopy. Biochemistry. 26:4545-4553.
    • (1987) Biochemistry , vol.26 , pp. 4545-4553
    • Kubista, M.1    Akerman, B.2    Norden, B.3
  • 17
    • 0001414917 scopus 로고
    • Induced circular dichroism in nonintercalative DNA-drug complexes. Sector rules for structural applications
    • Kubista, M., B. Akerman, and B. Norden. 1988. Induced circular dichroism in nonintercalative DNA-drug complexes. Sector rules for structural applications. J. Phys. Chem 92.2352-2356.
    • (1988) J. Phys. Chem , vol.92 , pp. 2352-2356
    • Kubista, M.1    Akerman, B.2    Norden, B.3
  • 19
    • 0026013128 scopus 로고
    • Binding of Hoechst 33258 and 4′,6-diamidino-2-phenylindole to self-complementary decadeoxynucleotides with modified exocyclic base substituent
    • Loontiens, F. G., L. W. McLaughlin, S. Dickmann, and R. M. Clegg. 1991. Binding of Hoechst 33258 and 4′,6-diamidino-2-phenylindole to self-complementary decadeoxynucleotides with modified exocyclic base substituent. Biochemistry. 30:182-189.
    • (1991) Biochemistry , vol.30 , pp. 182-189
    • Loontiens, F.G.1    McLaughlin, L.W.2    Dickmann, S.3    Clegg, R.M.4
  • 20
    • 0021109035 scopus 로고
    • Interaction of 4′,6-diamidine-2-phenylindoie (DAPI) with natural and synthetic nucleic acids
    • Manzini, G., M. L. Barcellona, M. Avitabile, and F. Quadrifoglio. 1983. Interaction of 4′,6-diamidine-2-phenylindoie (DAPI) with natural and synthetic nucleic acids. Nucleic Acids Res. 11:8861-8875.
    • (1983) Nucleic Acids Res. , vol.11 , pp. 8861-8875
    • Manzini, G.1    Barcellona, M.L.2    Avitabile, M.3    Quadrifoglio, F.4
  • 21
    • 51249173633 scopus 로고
    • Interaction of DAPI with synthetic and natural deoxy- and ribonucleic acids
    • Manzini, G., L. Xodo, M. L. Barcellona, and F. Quadrifoglio. 1985a. Interaction of DAPI with synthetic and natural deoxy- and ribonucleic acids. J. Biosci. 8:699-711.
    • (1985) J. Biosci. , vol.8 , pp. 699-711
    • Manzini, G.1    Xodo, L.2    Barcellona, M.L.3    Quadrifoglio, F.4
  • 23
    • 0020111555 scopus 로고
    • Characterization of 4′.6-diamidino-2-phenylmdole (DAPI) as a fluorescent probe of DNA structure
    • Masotti, L., P. Cavatorta, M. Avitabile, M. L. Barcellona, and N. Ragusa. 1982. Characterization of 4′.6-diamidino-2-phenylmdole (DAPI) as a fluorescent probe of DNA structure. Ital. J. Biochem. 31:90-99.
    • (1982) Ital. J. Biochem. , vol.31 , pp. 90-99
    • Masotti, L.1    Cavatorta, P.2    Avitabile, M.3    Barcellona, M.L.4    Ragusa, N.5
  • 24
    • 0026334849 scopus 로고
    • Flexibility of DNA in 2:1 drug DNA complexes - Simultaneous binding of two DAPI molecules to DNA
    • Mohan, S., and N. Yathindra. 1991. Flexibility of DNA in 2:1 drug DNA complexes - simultaneous binding of two DAPI molecules to DNA. J. Biomol. Struct. Dyn. 9:695-770.
    • (1991) J. Biomol. Struct. Dyn. , vol.9 , pp. 695-770
    • Mohan, S.1    Yathindra, N.2
  • 25
    • 0015223150 scopus 로고
    • Resonance energy transfer between ethidium bromide molecules bound to nucleic acids
    • Paoletti, J., and J. B. Le Pecq. 1971. Resonance energy transfer between ethidium bromide molecules bound to nucleic acids. J. Mol. Biol. 59: 43-62.
    • (1971) J. Mol. Biol. , vol.59 , pp. 43-62
    • Paoletti, J.1    Le Pecq, J.B.2
  • 26
    • 0027287569 scopus 로고
    • Abolition of intrinsically bent DNA structure components in at clusters by netropsin interaction: Titration viscometric investigations
    • Reinen, K. E. 1993. Abolition of intrinsically bent DNA structure components in AT clusters by netropsin interaction: titration viscometric investigations. J. Biomol. Struct. Dyn. 10:973-990.
    • (1993) J. Biomol. Struct. Dyn. , vol.10 , pp. 973-990
    • Reinen, K.E.1
  • 27
    • 0019426906 scopus 로고
    • Temperature mediated variation of DNA secondary structure in (AT) clusters: Evidence by use of the oligopeptide antibiotic netropsin as structural probe
    • Reinert, K. E., D. Geller, and E. Stutter. 1981. Temperature mediated variation of DNA secondary structure in (AT) clusters: evidence by use of the oligopeptide antibiotic netropsin as structural probe. Nucleic Acids Res. 9:2335-2349.
    • (1981) Nucleic Acids Res. , vol.9 , pp. 2335-2349
    • Reinert, K.E.1    Geller, D.2    Stutter, E.3
  • 28
    • 0024101391 scopus 로고
    • The amplitude of local angular motions of intercalated dyes and bases in DNA
    • Schurr, J. M., and B. S. Fujimoto. 1988. The amplitude of local angular motions of intercalated dyes and bases in DNA. Biopolymers. 27: 1543-1569.
    • (1988) Biopolymers , vol.27 , pp. 1543-1569
    • Schurr, J.M.1    Fujimoto, B.S.2
  • 29
    • 0000166387 scopus 로고
    • Fluorescence studies of nucleic acids: Dynamics, rigidities, and structures
    • J. R. Lakowicz, editor. Plenum Press, New York
    • Schurr, J. M., B. S. Fujimoto, P. Wu, and L. Song. 1992. Fluorescence studies of nucleic acids: dynamics, rigidities, and structures. In Topics in Fluorescence Spectroscopy, Vol. 3. J. R. Lakowicz, editor. Plenum Press, New York. 137-229.
    • (1992) Topics in Fluorescence Spectroscopy , vol.3 , pp. 137-229
    • Schurr, J.M.1    Fujimoto, B.S.2    Wu, P.3    Song, L.4
  • 30
    • 0017192623 scopus 로고
    • Reverse fluorescent chromosome banding with chromomycin and DAPI
    • Schweizer, D. 1976. Reverse fluorescent chromosome banding with chromomycin and DAPI. Chromosoma. 58:307-324.
    • (1976) Chromosoma , vol.58 , pp. 307-324
    • Schweizer, D.1
  • 32
    • 0019077298 scopus 로고
    • Torsion dynamics and depolarization of fluorescence of linear macromolecules. II. Fluorescence polarization anisotropy measurements on a clean viral 29 DNA
    • Thomas, J. C., S. A. Allison, C. J. Appellof, and J. M. Schurr. 1980. Torsion dynamics and depolarization of fluorescence of linear macromolecules. II. Fluorescence polarization anisotropy measurements on a clean viral 29 DNA. Biophys. Chem. 12:177-188.
    • (1980) Biophys. Chem. , vol.12 , pp. 177-188
    • Thomas, J.C.1    Allison, S.A.2    Appellof, C.J.3    Schurr, J.M.4
  • 34
    • 0024371196 scopus 로고
    • Binding of 4′,6-diamidino-2-phenylindole (DAPI) to GC and mixed sequences in DNA: Intercalation of a classical groove-binding molecule
    • Wilson, W. D., F. A. Tanious, H. J. Barton, L. Strekowski, and D. W. Boykin. 1989. Binding of 4′,6-diamidino-2-phenylindole (DAPI) to GC and mixed sequences in DNA: intercalation of a classical groove-binding molecule. J. Am. Chem. Soc. 111:5008-5010.
    • (1989) J. Am. Chem. Soc. , vol.111 , pp. 5008-5010
    • Wilson, W.D.1    Tanious, F.A.2    Barton, H.J.3    Strekowski, L.4    Boykin, D.W.5
  • 35
    • 0025840598 scopus 로고
    • Effect of ethidium on the torsion constants of linear and supercoiled DNAs
    • Wu, P. G., L. S. Fujimoto, and J. M. Schurr. 1991. Effect of ethidium on the torsion constants of linear and supercoiled DNAs. Biophys. Chem. 41:217-236.
    • (1991) Biophys. Chem. , vol.41 , pp. 217-236
    • Wu, P.G.1    Fujimoto, L.S.2    Schurr, J.M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.