메뉴 건너뛰기




Volumn 70, Issue 4, 1996, Pages 1893-1908

Action at a distance in supercoiled DNA: Effects of sequence on slither, branching, and intramolecular concentration

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BASE PAIRING; COMPUTER MODEL; DNA BINDING; DNA SEQUENCE; DNA STRUCTURE; DNA SUPERCOILING; MOLECULAR DYNAMICS; PLASMID;

EID: 0029862705     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(96)79754-0     Document Type: Article
Times cited : (19)

References (77)
  • 2
    • 36749121933 scopus 로고
    • Theory of twisting and bending of chain macromolecules; analysis of the fluorescence depolarization of DNA
    • Barkley, M. D., and B. H. Zimm. 1979. Theory of twisting and bending of chain macromolecules; analysis of the fluorescence depolarization of DNA. J. Chem. Phys. 70:2991-3007.
    • (1979) J. Chem. Phys. , vol.70 , pp. 2991-3007
    • Barkley, M.D.1    Zimm, B.H.2
  • 3
    • 0027398354 scopus 로고
    • Twist and writhe of a DNA loop containing intrinsic bends
    • Bauer, W. R., R. A. Lund, and J. H. White. 1993. Twist and writhe of a DNA loop containing intrinsic bends. Proc. Natl. Acad. Sci. USA. 90:833-837.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 833-837
    • Bauer, W.R.1    Lund, R.A.2    White, J.H.3
  • 5
    • 0019420927 scopus 로고
    • In vivo sequence requirements of the SV40 early promoter region
    • Benoist, C., and P. Chambon. 1981. In vivo sequence requirements of the SV40 early promoter region. Nature (London). 290:304-310.
    • (1981) Nature (London) , vol.290 , pp. 304-310
    • Benoist, C.1    Chambon, P.2
  • 6
    • 0025363121 scopus 로고
    • Structure of plectonemically supercoiled DNA
    • Boles, T. C., J. H. White, and N. R. Cozzarelli 1990. Structure of plectonemically supercoiled DNA. J. Mol. Biol. 213:931-951.
    • (1990) J. Mol. Biol. , vol.213 , pp. 931-951
    • Boles, T.C.1    White, J.H.2    Cozzarelli, N.R.3
  • 8
    • 0024828668 scopus 로고
    • Synthetic curved DNA sequences can act as transcriptional activators in Escherichia coli
    • Bracco, L., D. Kotlarz, A. Kolb, S. Diekmann, and H. Buc. 1989. Synthetic curved DNA sequences can act as transcriptional activators in Escherichia coli. EMBO J. 8:4289-4296.
    • (1989) EMBO J. , vol.8 , pp. 4289-4296
    • Bracco, L.1    Kotlarz, D.2    Kolb, A.3    Diekmann, S.4    Buc, H.5
  • 9
    • 0028184699 scopus 로고
    • Kinetics of DNA supercoiling studies by Brownian dynamics simulations
    • Chirico, G., and J. Langowski. 1994. Kinetics of DNA supercoiling studies by Brownian dynamics simulations. Biopolymers. 34:415-433.
    • (1994) Biopolymers , vol.34 , pp. 415-433
    • Chirico, G.1    Langowski, J.2
  • 10
    • 0026433006 scopus 로고
    • Methylation and the fragile X
    • Craig, I. 1991. Methylation and the fragile X. Nature (London). 349: 742-743.
    • (1991) Nature (London) , vol.349 , pp. 742-743
    • Craig, I.1
  • 11
    • 0022321540 scopus 로고
    • Two operator sites separated by 599 base pairs are required for deoR repression of the deo operon of Escherichia coli
    • Dandanell. G., and K. Hammer. 1985. Two operator sites separated by 599 base pairs are required for deoR repression of the deo operon of Escherichia coli. EMBO J. 4:3333-3338.
    • (1985) EMBO J. , vol.4 , pp. 3333-3338
    • Dandanell, G.1    Hammer, K.2
  • 12
    • 0027203669 scopus 로고
    • A DNA dodecamer containing an adenine tract crystallizes in a unique lattice and exhibits a new bend
    • DiGabriele, A. D., and T. A. Steitz. 1993. A DNA dodecamer containing an adenine tract crystallizes in a unique lattice and exhibits a new bend. J. Mol. Biol. 231:1024-1039.
    • (1993) J. Mol. Biol. , vol.231 , pp. 1024-1039
    • DiGabriele, A.D.1    Steitz, T.A.2
  • 13
    • 0021188333 scopus 로고
    • An operator at -280 base pairs that is required for repression of araBAD operon promoter: Addition of DNA helical turns between the operator and promoter cyclically hinders repression
    • Dunn, T. M., S. Hahn, S. Ogden, and R. F. Schleif. 1984. An operator at -280 base pairs that is required for repression of araBAD operon promoter: addition of DNA helical turns between the operator and promoter cyclically hinders repression. Proc. Natl. Acad. Sci. USA. 81:5017-5020
    • (1984) Proc. Natl. Acad. Sci. USA , vol.81 , pp. 5017-5020
    • Dunn, T.M.1    Hahn, S.2    Ogden, S.3    Schleif, R.F.4
  • 15
    • 0025148348 scopus 로고
    • Nucleoprotein structures initiating DNA replication, transcription, and site-specific recombination
    • Echols, H. 1990. Nucleoprotein structures initiating DNA replication, transcription, and site-specific recombination. J. Biol. Chem. 265: 14697-14700.
    • (1990) J. Biol. Chem. , vol.265 , pp. 14697-14700
    • Echols, H.1
  • 17
    • 0020359857 scopus 로고
    • Reversible bending and helix geometry in a B-DNA dodecamer: CGCGAATT(BrC)GCG
    • Fratini, A. V., M. L. Kopka, H. R. Drew, and R. E. Dickerson. 1982. Reversible bending and helix geometry in a B-DNA dodecamer: CGCGAATT(BrC)GCG. J. Biol. Chem. 257:14686-14707.
    • (1982) J. Biol. Chem. , vol.257 , pp. 14686-14707
    • Fratini, A.V.1    Kopka, M.L.2    Drew, H.R.3    Dickerson, R.E.4
  • 18
    • 0024300174 scopus 로고
    • DNA sequence determinants of CAP-induced bending and protein bindins affinity
    • Gartenberg, M. R., and D. M. Crothers. 1988. DNA sequence determinants of CAP-induced bending and protein bindins affinity. Nature (London). 333:824-829.
    • (1988) Nature (London) , vol.333 , pp. 824-829
    • Gartenberg, M.R.1    Crothers, D.M.2
  • 19
    • 0024424261 scopus 로고
    • Functional replacement of a protein-induced bend in a DNA recombination site
    • Goodman, S. D., and H. A. Nash. 1989. Functional replacement of a protein-induced bend in a DNA recombination site. Nature (London). 341:251-254.
    • (1989) Nature (London) , vol.341 , pp. 251-254
    • Goodman, S.D.1    Nash, H.A.2
  • 20
    • 0027536101 scopus 로고
    • Crystal structure of CATGGCCATG and its implications for A-tract bending models
    • Goodsell, D. S., M. L. Kopka, D. Cascio, and R. E. Dickerson. 1993. Crystal structure of CATGGCCATG and its implications for A-tract bending models. Proc. Natl. Acad. Sci. USA 90:2930-2934.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 2930-2934
    • Goodsell, D.S.1    Kopka, M.L.2    Cascio, D.3    Dickerson, R.E.4
  • 21
    • 0023058994 scopus 로고
    • Visualization of the bent helix in kinetoplast DNA by electron microscopy
    • Griffith, J., M. Bleyman, C. A. Rauch, P. A. Kitchin, and P. T. Englund. 1986. Visualization of the bent helix in kinetoplast DNA by electron microscopy. Cell 46:717-724.
    • (1986) Cell , vol.46 , pp. 717-724
    • Griffith, J.1    Bleyman, M.2    Rauch, C.A.3    Kitchin, P.A.4    Englund, P.T.5
  • 22
  • 23
    • 0019588074 scopus 로고
    • Investigation of the flexibility of DNA using transient electric birefringence
    • Hagerman, P. J. 1981. Investigation of the flexibility of DNA using transient electric birefringence. Biopolymers. 20:1503-1535.
    • (1981) Biopolymers , vol.20 , pp. 1503-1535
    • Hagerman, P.J.1
  • 24
    • 0000935665 scopus 로고
    • Evidence for the existence of stable curvature of DNA in solution
    • Hagerman, P. J. 1984. Evidence for the existence of stable curvature of DNA in solution. Proc. Natl. Acad. Sci. USA. 81:4632-4636.
    • (1984) Proc. Natl. Acad. Sci. USA , vol.81 , pp. 4632-4636
    • Hagerman, P.J.1
  • 25
    • 0025272593 scopus 로고
    • Applications of the method of phage T4 ligase-catalyzed ring closure to the study of DNA structure: I. Computational analysis
    • Hagerman, P. J., and Ramadevi. 1990. Applications of the method of phage T4 ligase-catalyzed ring closure to the study of DNA structure: I. Computational analysis. J. Mol. Biol. 212:351-362.
    • (1990) J. Mol. Biol. , vol.212 , pp. 351-362
    • Hagerman, P.J.1    Ramadevi2
  • 26
    • 0021724699 scopus 로고
    • Upstream repression and CRP stimulation of the E. coli L-arabmose operon
    • Hahn, S., T. Dunn, and R. Schleif. 1984. Upstream repression and CRP stimulation of the E. coli L-arabmose operon. J. Mol. Biol. 180:61-72.
    • (1984) J. Mol. Biol. , vol.180 , pp. 61-72
    • Hahn, S.1    Dunn, T.2    Schleif, R.3
  • 27
    • 0024715903 scopus 로고
    • Global equilibrium configurations of supercoiled DNA
    • Hao, M. H., and W. K. Olson. 1989a. Global equilibrium configurations of supercoiled DNA. Macromolecules. 22:3292-3303.
    • (1989) Macromolecules , vol.22 , pp. 3292-3303
    • Hao, M.H.1    Olson, W.K.2
  • 28
    • 0024504731 scopus 로고
    • Modeling DNA supercoils and knots with B-spline functions
    • Hao, M. H., and W. K. Olson. 1989b. Modeling DNA supercoils and knots with B-spline functions. Biopolymers. 28:873-900.
    • (1989) Biopolymers , vol.28 , pp. 873-900
    • Hao, M.H.1    Olson, W.K.2
  • 29
    • 0024805302 scopus 로고
    • Molecular modeling and energy refinement of supercoiled DNA
    • Hao, M. H., and W. K. Olson. 1990. Molecular modeling and energy refinement of supercoiled DNA. J. Biomol. Struct. Dyn. 7:661-692.
    • (1990) J. Biomol. Struct. Dyn. , vol.7 , pp. 661-692
    • Hao, M.H.1    Olson, W.K.2
  • 30
    • 0028073817 scopus 로고
    • Sequence elements responsible for DNA curvature
    • Haran, T. E., J. D. Kahn, and D. M. Crothers. 1994. Sequence elements responsible for DNA curvature. J. Mol. Biol. 244:135-143.
    • (1994) J. Mol. Biol. , vol.244 , pp. 135-143
    • Haran, T.E.1    Kahn, J.D.2    Crothers, D.M.3
  • 31
    • 0000402073 scopus 로고
    • The statistics of stiff chains with applications to light scattering
    • Hermans, J. J., and R. Ullman. 1952. The statistics of stiff chains with applications to light scattering. Physics. 18:951-971.
    • (1952) Physics , vol.18 , pp. 951-971
    • Hermans, J.J.1    Ullman, R.2
  • 32
    • 0024969573 scopus 로고
    • Supercoiling and integration host factor change the DNA conformation and alter the flow of convergent transcription in phage Mu
    • Higgins, N. P., D. A. Collier, M. W. Kilpatrick, and H. M. Krause. 1989. Supercoiling and integration host factor change the DNA conformation and alter the flow of convergent transcription in phage Mu. J. Biol. Chem 264:3035-3042.
    • (1989) J. Biol. Chem , vol.264 , pp. 3035-3042
    • Higgins, N.P.1    Collier, D.A.2    Kilpatrick, M.W.3    Krause, H.M.4
  • 33
    • 0020612485 scopus 로고
    • Dependence of DNA helix flexibility on base composition
    • Hogan, M. E., J. LeGrange, and B. Austin. 1983. Dependence of DNA helix flexibility on base composition. Nature (London). 304:752-754.
    • (1983) Nature (London) , vol.304 , pp. 752-754
    • Hogan, M.E.1    LeGrange, J.2    Austin, B.3
  • 34
    • 3843114319 scopus 로고
    • Intramolecular reaction in polycondensations. I. The theory of linear systems
    • Jacobson, H., and W. H. Stockmayer. 1950. Intramolecular reaction in polycondensations. I. The theory of linear systems. J. Chem. Phys. 18:1600-1606.
    • (1950) J. Chem. Phys. , vol.18 , pp. 1600-1606
    • Jacobson, H.1    Stockmayer, W.H.2
  • 36
    • 0019740050 scopus 로고
    • Dependence of laser light scattering of DNA on NaCl concentration
    • Kam, Z., N. Borochov, and H. Eisenberg. 1981. Dependence of laser light scattering of DNA on NaCl concentration. Biopolymers. 20:2671-2690.
    • (1981) Biopolymers , vol.20 , pp. 2671-2690
    • Kam, Z.1    Borochov, N.2    Eisenberg, H.3
  • 37
    • 0028819366 scopus 로고
    • Modulation of intramolecular interactions in superhelical DNA by curved sequences: A Monte Carlo simulation study
    • Klenin, K. V., M. D. Frank-Kamenetskii, and J. Langowski. 1995. Modulation of intramolecular interactions in superhelical DNA by curved sequences: a Monte Carlo simulation study. Biophys. J. 68:81-88.
    • (1995) Biophys. J. , vol.68 , pp. 81-88
    • Klenin, K.V.1    Frank-Kamenetskii, M.D.2    Langowski, J.3
  • 39
    • 0020742840 scopus 로고
    • Site specific relaxation and recombination by the Tn3 resolvase: Recognition of the DNA path between oriented Res sites
    • Krasnow, M. A., and N. R. Cozzarelli. 1983. Site specific relaxation and recombination by the Tn3 resolvase: recognition of the DNA path between oriented Res sites. Cell. 32:1313-1324.
    • (1983) Cell , vol.32 , pp. 1313-1324
    • Krasnow, M.A.1    Cozzarelli, N.R.2
  • 40
    • 0027522081 scopus 로고
    • DNA curvature influences the internal motions of supercoiled DNA
    • Kremer, W., K. Klenin, S. Diekmann, and J. Langowski. 1993. DNA curvature influences the internal motions of supercoiled DNA. EMBO J. 12.4407-4412.
    • (1993) EMBO J. , vol.12 , pp. 4407-4412
    • Kremer, W.1    Klenin, K.2    Diekmann, S.3    Langowski, J.4
  • 41
    • 0024386798 scopus 로고
    • Dynamic, structural and regulatory aspects of λ specific recombination
    • Landy, A. 1989. Dynamic, structural and regulatory aspects of λ specific recombination. Annu. Rev. Biochem. 58:913-950.
    • (1989) Annu. Rev. Biochem. , vol.58 , pp. 913-950
    • Landy, A.1
  • 42
    • 0028066752 scopus 로고
    • Solution structure and dynamics of DNA topoisomers. Dynamic light scattering studies and Monte Carlo simulations
    • Langowski, J., U. Kapp, K. Klenin, and A. V Vologodskii. 1994 Solution structure and dynamics of DNA topoisomers. Dynamic light scattering studies and Monte Carlo simulations. Biopolymers. 34:639-646.
    • (1994) Biopolymers , vol.34 , pp. 639-646
    • Langowski, J.1    Kapp, U.2    Klenin, K.3    Vologodskii, A.V.4
  • 43
    • 0024297575 scopus 로고
    • Curved helix segments can uniquely orient the topology of supertwisted DNA
    • Laundon, C. H., and J. D. Griffith. 1988. Curved helix segments can uniquely orient the topology of supertwisted DNA. Cell. 52:545-549.
    • (1988) Cell , vol.52 , pp. 545-549
    • Laundon, C.H.1    Griffith, J.D.2
  • 44
    • 0026092358 scopus 로고
    • AraC-DNA looping: Orientation and distance-dependent loop breaking by the cyclic AMP receptor protein
    • Lobell, R. B., and R. F. Schleif. 1991. AraC-DNA looping: orientation and distance-dependent loop breaking by the cyclic AMP receptor protein. J. Mol. Biol. 218:45-54.
    • (1991) J. Mol. Biol. , vol.218 , pp. 45-54
    • Lobell, R.B.1    Schleif, R.F.2
  • 46
    • 0028000456 scopus 로고
    • Fluctuations and supercoiling of DNA
    • Marko, J. F., and E. D. Sigaia. 1994, Fluctuations and supercoiling of DNA. Science. 265:506-508.
    • (1994) Science , vol.265 , pp. 506-508
    • Marko, J.F.1    Sigaia, E.D.2
  • 48
    • 0023513912 scopus 로고
    • The structure of an oligo(dA). Oligo(dT) tract and its biological implications
    • Nelson, H. C. M., J. T. Finch, B. F. Luisi, and A. Klug. 1987. The structure of an oligo(dA). Oligo(dT) tract and its biological implications. Nature (London). 330:221-226.
    • (1987) Nature (London) , vol.330 , pp. 221-226
    • Nelson, H.C.M.1    Finch, J.T.2    Luisi, B.F.3    Klug, A.4
  • 49
    • 0025817867 scopus 로고
    • Dynamics of long-range interactions on DNA
    • Parker, C. N., and S. E. Halford. 1991 Dynamics of long-range interactions on DNA. Cell. 66:781-791.
    • (1991) Cell , vol.66 , pp. 781-791
    • Parker, C.N.1    Halford, S.E.2
  • 50
    • 0027314409 scopus 로고
    • Protein-induced bending as a transcriptional switch
    • Perez-Martin, J., and M. Espinosa. 1993. Protein-induced bending as a transcriptional switch. Science. 260:805-807.
    • (1993) Science , vol.260 , pp. 805-807
    • Perez-Martin, J.1    Espinosa, M.2
  • 51
    • 0020131239 scopus 로고
    • Calculating composite bending, shearing, torsional and base tilting force constants of B- and A-form poly(dG)-poly(dC)
    • Putnam, B. F., E. W. Prohofsky, and L. L. van Zandt. 1982. Calculating composite bending, shearing, torsional and base tilting force constants of B- and A-form poly(dG)-poly(dC). Biopolymers. 21:885-894.
    • (1982) Biopolymers , vol.21 , pp. 885-894
    • Putnam, B.F.1    Prohofsky, E.W.2    Van Zandt, L.L.3
  • 52
    • 0019866165 scopus 로고
    • Flow dichroism of T7 DNA as function of salt concentration
    • Rizzo, V., and J. Schellman. 1981. Flow dichroism of T7 DNA as function of salt concentration. Biopolymers. 20:2143-2163.
    • (1981) Biopolymers , vol.20 , pp. 2143-2163
    • Rizzo, V.1    Schellman, J.2
  • 53
    • 0023732135 scopus 로고
    • Origin of DNA helical structure and its sequence dependence
    • Sarai, A., J. Mazur, R. Nussinov, and R. L. Jernigan. 1988. Origin of DNA helical structure and its sequence dependence. Biochemistry. 27: 8498-8502.
    • (1988) Biochemistry , vol.27 , pp. 8498-8502
    • Sarai, A.1    Mazur, J.2    Nussinov, R.3    Jernigan, R.L.4
  • 54
    • 0016382119 scopus 로고
    • Flexibility of DNA
    • Schellman, J. A. 1974. Flexibility of DNA. Biopolymers. 13:217-226.
    • (1974) Biopolymers , vol.13 , pp. 217-226
    • Schellman, J.A.1
  • 55
    • 0029066852 scopus 로고
    • Modeling superhelical DNA: Recent analytical and dynamic approaches
    • Schlick, T. 1995. Modeling superhelical DNA: recent analytical and dynamic approaches. Curr. Opin. Struct. Biol. 5:245-262.
    • (1995) Curr. Opin. Struct. Biol. , vol.5 , pp. 245-262
    • Schlick, T.1
  • 57
    • 0027200062 scopus 로고
    • Knotting of a DNA chain during ring closure
    • Shaw, S. Y., and J. C. Wang 1993. Knotting of a DNA chain during ring closure. Science. 260:533-536.
    • (1993) Science , vol.260 , pp. 533-536
    • Shaw, S.Y.1    Wang, J.C.2
  • 58
    • 0021022977 scopus 로고
    • Energetics of DNA twisting. I. Relation between twist and cyclization probability
    • Shore, D., and R. L. Baldwin. 1983. Energetics of DNA twisting. I. Relation between twist and cyclization probability. J. Mol. Biol. 170:957-981.
    • (1983) J. Mol. Biol. , vol.170 , pp. 957-981
    • Shore, D.1    Baldwin, R.L.2
  • 59
    • 0001191247 scopus 로고
    • DNA flexibility studied by covalent closure of short fragments into circles
    • Shore, D., J. Langowski, and R. L. Baldwin. 1981. DNA flexibility studied by covalent closure of short fragments into circles. Proc. Natl. Acad. Sci USA. 78:4833-4837.
    • (1981) Proc. Natl. Acad. Sci USA , vol.78 , pp. 4833-4837
    • Shore, D.1    Langowski, J.2    Baldwin, R.L.3
  • 61
    • 0022111794 scopus 로고
    • The stereostructure of the knots and catenanes produced by phage λ integrative recombination: Implications for the mechanism and DNA structure
    • Spengler, S. J., A. Stasiak, and N. R. Cozzarelli. 1985. The stereostructure of the knots and catenanes produced by phage λ integrative recombination: implications for the mechanism and DNA structure. Cell 42:325-334.
    • (1985) Cell , vol.42 , pp. 325-334
    • Spengler, S.J.1    Stasiak, A.2    Cozzarelli, N.R.3
  • 62
    • 0030220418 scopus 로고    scopus 로고
    • Molecular modeling of closed circular DNA thermodynamic ensembles
    • In press
    • Sprous, D., R. K.-Z. Tan, and S. C. Harvey. 1996. Molecular modeling of closed circular DNA thermodynamic ensembles. Biopolymers. In press.
    • (1996) Biopolymers
    • Sprous, D.1    Tan, R.K.-Z.2    Harvey, S.C.3
  • 63
    • 0023460108 scopus 로고
    • Base sequence effects in double helical DNA. I. Potential energy estimates of local base morphology
    • Srinivasan, A. R , Torres, R., Clark, W., and Olson, W. K. 1987. Base sequence effects in double helical DNA. I. Potential energy estimates of local base morphology. J. Biomol. Struct. Dyn. 5:459-496.
    • (1987) J. Biomol. Struct. Dyn. , vol.5 , pp. 459-496
    • Srinivasan, A.R.1    Torres, R.2    Clark, W.3    Olson, W.K.4
  • 64
    • 0017389770 scopus 로고
    • Interactions of highly charged colloidal cylinder with applications to the double stranded DNA
    • Stigter, D. 1977. Interactions of highly charged colloidal cylinder with applications to the double stranded DNA. Biopolymers. 16:1435-1448.
    • (1977) Biopolymers , vol.16 , pp. 1435-1448
    • Stigter, D.1
  • 65
    • 0024590138 scopus 로고
    • Molecular mechanics model for DNA supercoiling
    • Tan, R. K.-Z., and S. C. Harvey. 1989. Molecular mechanics model for DNA supercoiling. J. Mol. Biol. 205:573-591.
    • (1989) J. Mol. Biol. , vol.205 , pp. 573-591
    • Tan, R.K.-Z.1    Harvey, S.C.2
  • 66
    • 0030220837 scopus 로고    scopus 로고
    • Molecular dynamics simulation of small DNA plasmids: Effects of sequence and supercoiling on intramolecular motions
    • In press
    • Tan, R. K.-Z., D Sprous, and S. C. Harvey. 1996. Molecular dynamics simulation of small DNA plasmids: effects of sequence and supercoiling on intramolecular motions. Biopolymers. In press.
    • (1996) Biopolymers
    • Tan, R.K.-Z.1    Sprous, D.2    Harvey, S.C.3
  • 67
    • 0021111771 scopus 로고
    • Chain flexibility and hydrodynamics of the B and Z forms of poly(dG-dC)-poly(dG-dC)
    • Thomas, T. J., and V. A. Bloomfield. 1983. Chain flexibility and hydrodynamics of the B and Z forms of poly(dG-dC)-poly(dG-dC). Nucleic Acids Res. 11:1919-1930.
    • (1983) Nucleic Acids Res. , vol.11 , pp. 1919-1930
    • Thomas, T.J.1    Bloomfield, V.A.2
  • 69
    • 0026003202 scopus 로고
    • Temperature-sensitive mutations in the bacteriophage Mu c repressor locate a 63-amino-acid DNA-binding domain
    • Vogel, J. L., Z. J. Li, M. M. Howe, A. Toussaint, and N. P. Higgins. 1991 Temperature-sensitive mutations in the bacteriophage Mu c repressor locate a 63-amino-acid DNA-binding domain. J. Bacteriol. 173: 6568-6577.
    • (1991) J. Bacteriol. , vol.173 , pp. 6568-6577
    • Vogel, J.L.1    Li, Z.J.2    Howe, M.M.3    Toussaint, A.4    Higgins, N.P.5
  • 70
    • 0027171352 scopus 로고
    • Monte Carlo analysis of conformation DNA catenanes
    • Vologodskii, A. V., and N. R. Cozzarelli. 1993. Monte Carlo analysis of conformation DNA catenanes. J. Mol. Biol. 232:1130-1140.
    • (1993) J. Mol. Biol. , vol.232 , pp. 1130-1140
    • Vologodskii, A.V.1    Cozzarelli, N.R.2
  • 72
    • 0000751914 scopus 로고
    • Self-Linking and the Gauss integral in higher dimensions
    • White, J. H. 1969. Self-Linking and the Gauss integral in higher dimensions. Am. J. Math. 91:693-728.
    • (1969) Am. J. Math. , vol.91 , pp. 693-728
    • White, J.H.1
  • 73
    • 0000091323 scopus 로고
    • Finite element analysis of DNA supercoiling
    • Yang, Y., I. Tobias, and W. Olson. 1993. Finite element analysis of DNA supercoiling. J. Comp. Chem. 98:1673-1686.
    • (1993) J. Comp. Chem. , vol.98 , pp. 1673-1686
    • Yang, Y.1    Tobias, I.2    Olson, W.3
  • 75
    • 0000191935 scopus 로고
    • The B- to Z-DNA equilibrium in vivo is perturbed by biological processes
    • Zacharias, W., A. Jaworski, J. E. Larson, and R. D. Wells. 1988. The B- to Z-DNA equilibrium in vivo is perturbed by biological processes. Proc. Natl. Acad. Sci. USA. 85:7069-7073
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 7069-7073
    • Zacharias, W.1    Jaworski, A.2    Larson, J.E.3    Wells, R.D.4
  • 76
    • 0027979013 scopus 로고
    • Protein induced changes in DNA folding
    • Zhang, P., I. Tobias, and W. K. Olson. 1994. Protein induced changes in DNA folding. J. Mol. Biol. 242:271-290.
    • (1994) J. Mol. Biol. , vol.242 , pp. 271-290
    • Zhang, P.1    Tobias, I.2    Olson, W.K.3
  • 77
    • 0018447932 scopus 로고
    • Anisotropic flexibility of DNA and the nucleosomal structure
    • Zhurkin, V. B., Y. P. Lysov, and V. I. Ivanov. 1979. Anisotropic flexibility of DNA and the nucleosomal structure. Nucleic Acids Res. 6:1081-1096
    • (1979) Nucleic Acids Res. , vol.6 , pp. 1081-1096
    • Zhurkin, V.B.1    Lysov, Y.P.2    Ivanov, V.I.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.