The molecular structure of Iresine viroid, a new viroid species from Iresine herbstii ('beefsteak plant')

Journal of General Virology

Volumn 77, Issue 10, 1996, Pages 2631-2635

  Spieker, Reiner L ^a  

^a MAX PLANCK INSTITUTE OF BIOCHEMISTRY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS RNA;

ARTICLE; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANT VIRUS; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRIORITY JOURNAL; VIROID; VIRUS GENOME; VIRUS INFECTION; VIRUS ISOLATION; VIRUS MORPHOLOGY;

IRESINE HERBSTII; IRESINE VIROID 1; PERILLA FRUTESCENS; POTATO SPINDLE TUBER VIROID; SOLANUM TUBEROSUM; VIROIDS;

EID: 0029860517     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/0022-1317-77-10-2631     Document Type: Article

References (25)

1. Daros, J. A. & Flores, R. H. (1995). Characterization of multiple circular RNAs derived from a plant viroid-like RNA by sequence deletions and duplications. RNA 1, 734-744.
2. Diener, T. O. (1991). The frontier of life: the viroid and viroid-like satellites RNAs. In Viroids and Satellites: Molecular Parasites at the Frontier of Life, pp. 1-20. Edited by K. Maramorosch. Boca Raton: CRC Press.
3. Gross, H. J., Domdey, H., Lossow, C., Jank, P., Raba, M., Alberty, H. & Sänger, H. L. (1978). Nucleotide sequence and secondary structure of potato spindle tuber viroid. Nature 273, 203-208.
4. Gross, H. J., Krupp, G., Domdey, H., Raba, M., Alberty, H., Lossow, C. H., Ramm, K. & Sänger, H. L. (1982). Nucleotide sequence and secondary structure of citrus exocortis and chrysanthemum stunt viroid. European Journal of Biochemistry 121, 249-257.
5. Hammond, R., Smith, D. R. & Diener, T. O. (1989). Nucleotide sequence and proposed secondary structure of Columnea latent viroid: a natural mosaic of viroid sequences. Nucleic Acids Research 23, 10083-10094.
6. Haseloff, J., Mohammed, N. A. & Symons, R. H. (1982). Viroid RNAs of cadang-cadang disease of coconuts. Nature 299, 316-321.
7. Keese, P. & Symons, R. H. (1985). Domains in viroids: evidence of intermolecular rearrangements and their contribution to viroid evolution. Proceedings of the National Academy of Sciences, USA 82, 4582-4586.
8. Kiefer, M. C., Owens, R. A. & Diener, T. O. (1983). Structural similarities between viroids and transposable genetic elements. Biochemistry 80, 6234-6238.
9. Koltunow, A. M. & Rezaian, M. A. (1989). A scheme of viroid classification. Intervirology 30, 194-201.
10. Maxam, A. M. & Gilbert, W. (1980). Sequencing end-labelled DNA with base-specific chemical cleavages. Methods in Enzymology 65, 499-560.
11. Rezaian, A. M. (1990). Australian grapevine viroid - evidence for extensive recombination between viroids. Nucleic Acids Research 18, 1813-1818.
12. Riesner, D. (1991). Viroids: from thermodynamics to cellular structure and function. Molecular Plant-Microbe Interactions 4, 122-131.
13. Riesner, D., Henco, K., Rokohol, U., Klotz, G., Kleinschmidt, A. K., Domdey, H., Jank, P., Gross, H. J. & Sänger, H. L. (1979). Structure and structure formation of viroids. Journal of Molecular Biology 133, 85-115.
14. Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning: A Laboratory Manual, 2nd edn. New York: Cold Spring Harbor Laboratory.
15. Sanger, F., Nicklen, S. & Coulson, A. R. (1977). DNA sequencing with chain-terminating inhibitors. Proceedings of the National Academy of Sciences, USA 74, 5463-5467.
16. Sänger, H. L., Klotz, G., Riesner, D., Gross, H. J. & Kleinschmidt, A. K. (1976). Viroids are single-stranded covalently closed circular RNA molecules existing as highly base-paired rod-like structures. Proceedings of the National Academy of Sciences, USA 73, 3852-3856.
17. Schnölzer, M., Haas, B., Ramm, K., Hofmann, H. & Sänger, H. L. (1985). Correlation between structure and pathogenicity of potato spindle tuber viroid (PSTV). EMBO Journal 4, 2181-2190.
18. Schumacher, J., Randles, J. W. & Riesner, D. (1983). A two-dimensional electrophoresis technique for the detection of circular viroids and virusoids. Analytical Biochemistry 135, 288-295.
19. Semancik, J. S., Szychowski, J. A., Rakowski, A. G. & Symons, R. H. (1993). Isolates of citrus exocortis viroid recovered by host and tissue selection. Journal of General Virology 74, 2427-2436.
20. Singh, R. P., Lakshman, D. K., Boucher, A. & Tavantzis, S. M. (1992). A viroid from Nematanthus wettsteinii plants closely related to the Columnea latent viroid. Journal of General Virology 73, 2769-2774.
21. Spieker, R. L. (1991). A new class of viroids in Coleus blumei: sequencing, cloning, structure/function-analysis by site-directed mutagenesis and expression in Nicotiana tabacum. Karlsruhe Contributions to Plant Physiology 22, 1-226.
22. Spieker, R. L., Haas, B., Charng, Y. C., Freimüller, K. & Sänger, H. L. (1990). Primary and secondary structure of a new viroid 'species' (CbVd 1) present in the Coleus blumei cultivar 'Bienvenue'. Nucleic Acids Research 18, 3998.
23. Spieker, R. L., Marinkovic, S. & Sänger, H. L. (1996). A viroid from Solanum pseudocapsicum closely related to the tomato apical stunt viroid. Archives of Virology (in press).
24. Wassenegger, M., Heimes, S. & Sänger, H. L. (1994). An infectious viroid RNA replicon evolved from an in vitro-generated non-infectious viroid deletion mutant via a complementary deletion in vivo. EMBO Journal 13, 6172-6177.
25. Zuker, M. (1989). On finding all suboptimal foldings of an RNA molecule. Science 244, 48-52.