The putative substrate recognition loop of Escherichia coli ribonuclease H is not essential for activity

Journal of Biological Chemistry

Volumn 271, Issue 33, 1996, Pages 19883-19887

  Keck, James L ^a   Marqusee, Susan ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

RIBONUCLEASE H;

AMINO ACID SEQUENCE; AMINO ACID SUBSTITUTION; ARTICLE; ENZYME ACTIVITY; ENZYME BINDING; ENZYME SUBUNIT; ESCHERICHIA COLI; HUMAN IMMUNODEFICIENCY VIRUS 1; MOLECULAR RECOGNITION; NONHUMAN; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY;

AMINO ACID SEQUENCE; CATIONS, DIVALENT; ESCHERICHIA COLI; HELIX-LOOP-HELIX MOTIFS; HIV; MANGANESE; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PROTEIN CONFORMATION; RIBONUCLEASE H, CALF THYMUS; SEQUENCE DELETION; STRUCTURE-ACTIVITY RELATIONSHIP; THERMODYNAMICS;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; HUMAN IMMUNODEFICIENCY VIRUS; HUMAN IMMUNODEFICIENCY VIRUS 1;

EID: 0029834664     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.271.33.19883     Document Type: Article

References (29)

1. Hostomsky, Z., Hostomska, Z., and Matthews, D. A. (1993) in Nucleases (Roberts, R. J., et al. eds) 2nd Ed., pp. 341-376, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
2. Skalka, A.-M., and Goff, S. P. (eds) (1993) Reverse Transcriptase, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
3. Powers, R., Clore, G. M., Bax, A., Garrett, D. S., Stahl, S. J., Wingfield, P. T., and Gronenborn, A. M. (1991) J. Mol. Biol. 221, 1081-1090
4. Powers, R., Clore, G. M., Stahl, S. J., Wingfield, P. T., and Gronenborn, A. M. (1992) Biochemistry 31, 9150-9157
5. Davies, J. F., Hostomska, Z., Hostomsky, Z., Jordan, S. R., and Matthews, D. A. (1991) Science 252, 88-95
6. Schatz, O., Cromme, F. V., Gruninger-Leitch, F., and Le Grice, S. F. J. (1989) Febs. Lett. 257, 311-314
7. Kanaya, S., Kohara, A., Miura, Y., Sekiguchi, A., Iwai, S., Inoue, H., Ohtsuka, E., and Ikehara, M. (1990) J. Biol. Chem. 265, 4615-4621
8. Oda, Y., Yoshida, M., and Kanaya, S. (1993) Biol. Biol. Chem. 268, 88-92
9. Haruki, M., Noguchi, E., Akasako, A., Oobatake, M., Itaya, M., and Kanaya, S. (1994) J. Biol. Chem. 269, 26904-26911
10. Haruki, M., Nouchi, E., Nakai, C., Liu, Y. Y., Oobatake, M., Itaya, M., and Kanaya, S. (1994) Eur. J. Biochem. 220, 623-631
11. Johnson, M. S., McClure, M. A., Feng, D. F., Gray, J., and Doolittle, R. F. (1986) Proc. Natl. Acad. Sci. U. S. A. 83, 7648-7652
12. Kanaya, S., Katsuda-Nakai, C., and Ikehara, M. (1991) J. Biol. Chem. 266, 11621-11627
13. Stahl, S. J., Kaufman, J. D., Vikic, T. S., Crouch, R. J., and Wingfield, P. T. (1994) Protein Eng. 7, 1103-1108
14. Keck, J. L., and Marqusee, S. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 2740-2744
15. Dabora, J. II., and Marqusee, S. (1994) Protein Sci. 3, 1401-1408
16. Sambrook, J., Fritsch, E. F., and Maniatis, T. (19S9) Molecular Cloning: A Laboratory Manual 2nd Ed., Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
17. Kane, C. M. (1988) Biochemistry 27, 3187-3196
18. Santoro, M. M., and Bolen, D. W. (1988) Biochemistry 27, 8063-8068
19. Cantor, C. R., and Schimmel, P. R. (1980) Biophysical Chemistry W. H. Freeman and Co., New York
20. Kraulis, P. J. (1991) J. Appl. Crystallogr. 24, 946-950
21. Berkower, I., Leis, J., and Hurwitz, J. (1973) J. Biol. Chem. 248, 5914-5921
22. Cirino, N. M., Cameron, C. E., Smith, J. S., Rausch, J. W., Roth, M. J., Benkovic, S. J., and Le Grice, S. F. (1995) Biochemistry 34, 9936-9943
23. Smith, J. S., and Roth, M. J. (1993) J. Virol. 67, 4037-4049
24. Evans, D. B., Brawn, K., Deibel, M. R., Jr., Tarpley, W. G., and Sharma, S. K. (1991) J. Biol. Chem. 266, 20583-20585
25. Blain, S. W., and Goff, S. P. (1996) J. Biol. Chem. 271, 1448-1454
26. Zhan, X., Tan, C. K., Scott, W. A., Mian, A. M., Do-vney, K. M., and So, A. G. (1994) Biochemistry 33, 1366-1372
27. Kanaya, E., and Kanaya, S. (1995) J. Biol. Chem. 270, 19853-19860
28. Katayanagi, K., Miyagawa, M., Matsushima, M., Ishikawa, M., Kanaya, S., Ikehara, M., Matsuzaki, T., and Morikawa, K. (1990) Nature 347, 306-309
29. Yang, Y., Hendrickson, W. A., Crouch, R. J., and Satow, Y. (1990) Science 249, 1398-1405