SHM1: A multicopy suppressor of a temperature-sensitive null mutation in the HMG1-like abf2 gene

Yeast

Volumn 12, Issue 12, 1996, Pages 1239-1250

  Kao, Ling Rong ^a,c   Megraw, Timothy L ^a,c   Chae, Chi Bom ^a,b  

^a UNIVERSITY OF NORTH CAROLINA SCHOOL OF MEDICINE   (United States)

^b Pohang University of Science and Technology (POSTECH)   (South Korea)

^c INDIANA UNIVERSITY   (United States)

Author keywords

ABF2; HM; Mitochondrial carrier proteins; SHM1

Indexed keywords

CARRIER PROTEIN;

ARTICLE; CONTROLLED STUDY; DNA SEQUENCE; MITOCHONDRION; NONHUMAN; PRIORITY JOURNAL; SACCHAROMYCES CEREVISIAE; SUPPRESSOR GENE; TEMPERATURE SENSITIVE MUTANT;

AMINO ACID SEQUENCE; BASE SEQUENCE; CARRIER PROTEINS; CLONING, MOLECULAR; CULTURE MEDIA; DNA, FUNGAL; DNA, MITOCHONDRIAL; FUNGAL PROTEINS; GENE DELETION; GENES, FUNGAL; GENES, SUPPRESSOR; HIGH MOBILITY GROUP PROTEINS; MEMBRANE PROTEINS; MITOCHONDRIA; MOLECULAR SEQUENCE DATA; MUTATION; PLASMIDS; REPRESSOR PROTEINS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; TEMPERATURE;

SACCHAROMYCES CEREVISIAE;

EID: 0029832478     PISSN: 0749503X     EISSN: None     Source Type: Journal    
DOI: 10.1002/(SICI)1097-0061(19960930)12:12<1239::AID-YEA17>3.0.CO;2-8     Document Type: Article

References (38)

1. Adrain, G. S., McCammon, M. T., Montgomery, D. L. and Douglas, M. G. (1986). Sequences required for delivery and localization of the ADP/ATP translocator to the mitochondrial inner membrane. Mol. Cell Biol. 6, 626-634.
2. Albring, M., Griffith, J. and Attardi, G. (1977). Association of a protein structure of probable membrane derivation with Hela cell mitochondrial DNA near its origin of replication. Proc. Natl Acad. Sci. USA 74, 1348-1352.
3. Aquila, H., Link, T. A. and Klingenberg, M. (1985). The uncoupling protein from brown fat mitochondria is related to mitochondrial ADP/ATP carrier. Analysis of sequence homologies and of folding of the proteins in the membrane. EMBO J. 4, 2369-2376.
4. Aquila, H., Link, T. A. and Klingenberg, M. (1987). Solute carriers involved in energy transfer of mitochondria form a homologous protein family. FEBS Lett. 212, 1-9.
5. Arends, H. and Sebald, W. (1984). Nucleotide sequence of the cloned mRNA and gene of the ADP/ATP carrier from Neurospora crassa. EMBO J. 3, 377-382.
6. Bouillaud, F., Weissenbach, J. and Riquier, D. (1986). Complete cDNA-derived amino acid sequence of rat brown fat uncoupling protein. J. Biol. Chem. 261, 1487-1490.
7. Broyles, S. S. and Pettijohn, D. E. (1986). Interaction of the Escherichia coli HU protein with DNA. Evidence for formation of nucleosome-like structures with altered DNA helical pitch. J. Mol. Biol. 187, 47-60.
8. Caron, F., Jacq, F. and Rouvière-Yaniv, J. (1979). Characterization of a histone-like protein extracted from yeast mitochondria. Proc. Natl. Acad. Sci. USA 76, 4265-4269.
9. Demolis, N., Mallet, L., Bussereau, F. and Jacquet, M. (1993). RIM2, MSI1 and PGI1 are located within an 8 kb segment of S. cerevisiae chromosome II, which also contains the putative ribosomal gene L21 and a new putative essential gene with a leucine zipper motif. Yeast 9, 645-659.
10. Diffley, J. F. K. and Stillman, B. (1991). A close relative of the nuclear chromosomal high-mobility group protein HMG1 in yeast mitochondria. Proc. Natl. Acad. Sci. USA 88, 7864-7868.
11. Diffley, J. F. K. and Stillman, B. (1992). DNA binding properties of an HMG1-related protein from yeast mitochondria. J. Biol. Chem. 267, 3368-3374.
12. Firshein, W. (1989). Role of the DNA/membrane complex in prokaryotic DNA replication. Annu. Rev. Microbiol. 43, 89-120.
13. - genomes having tandemly arranged repeat units in Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 80, 5435-5439.
14. Foury, F. and Van Dyck, E. (1985). A PIF-dependent recombinogenic signal in the mitochondrial DNA. EMBO J. 4, 3525-3530.
15. Foury, F. and Lahaye, A. (1987). Cloning and sequencing of the PIF gene involved in repair and recombination of yeast mitochondrial DNA. EMBO J. 6, 1441-1449.
16. Germond, J.-E., Rouvière-Yaniv, J., Yaniv, M. and Brutlag, D. G. (1979). Nicking-closing enzyme assembles nucleosome-like structure in vitro. Proc. Natl. Acad Sci. USA 76, 3779-3783.
17. Guthrie, R. and Fink, G. R. (Eds) (1991). Guide to Yeast Genetics and Molecular Biology. Academic Press Inc., San Diego, California.
18. Kao, L.-R., Megraw, T. L. and Chae, C.-B. (1993). Essential role of the HMG domain in the function of yeast mitochondrial histone HM: functional complementation of HM by the nuclear nonhistone protein NHP6A. Proc. Natl. Acad Sci. USA 90, 5598-5602.
19. Klingenberg, M. and Nelson, D. R. (1995). Structure-function relationships in the mitochondrial carrier family. In Papa, S. and Toger, J. M. (Eds), Biochemistry of Cell Membranes: A Compendium of Selected Topics. Birkhauser Verlag, Basel, pp. 191-219.
20. Lahaye, A., Stahl, H., Thines-Sempoex, D. and Foury, F. (1991). PIF1: a DNA helicase in yeast mitochondria. EMBO J. 10, 997-1007.
21. Leibowitz, P. J. and Schaechter, M. (1975). The attachment of the bacterial chromosome to the cell membrane. Int. Rev. Cytol. 41, 1-28.
22. Maniatis, T., Fritch, E. F. and Sambrook, J. (Eds) (1982). Analysis of recombinant DNA clones. Southern transfer. In Molecular Cloning: a Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, pp. 382-389.
23. Megraw, T. L. and Chae, C.-B. (1993). Functional complementarity between the HMG1-like yeast mitochondrial histone HM and the bacterial histone-like protein HU. J. Biol. Chem. 268, 12758-12763.
24. Megraw, T. L., Kao, L.-R. and Chae, C.-B. (1994). The mitochondrial histone HM: an evolutionary link between bacterial HU and nuclear HMG1 proteins. Biochimie 76, 909-916.
25. Nass, M. M. K. (1969). Mitochondrial DNA. I. Intra-mitochondrial distribution and structure relations of single- and double-length circular DNA. J. Mol. Biol. 42, 521-528.
26. 1 mutation in yeast. J. Biol. Chem. 257, 2097-2103.
27. Parisi, M. A., Xu, B. and Clayton, D. A. (1993). A human mitochondrial transcription activator can functionally replace a yeast mitochondrial HMG-box protein in vivo and in vitro. Mol. Cell. Biol. 13, 1951-1961.
28. Powell, S. J., Medd, S. M., Runswick, M. J. and Walker, J. E. (1989). Two bovine genes for mitochondrial ADP/ATP translocase expressed differently in various tissues. Biochemistry 28, 866-873.
29. Rickwood, D., Chambers, J. A. A. and Baret, M. (1981). Isolation and preliminary characterization of DNA-protein complexes from the mitochondria of Saccharomyces cerevisiae. FEMS Microbiol. Lett 12, 187-190.
30. Rouvière-Yaniv, J., Yaniv, M. and Germond, J.-E. (1979). E. coli DNA binding protein HU forms nucleosome-like structure with circular double strand DNA. Cell 17, 265-274.
31. Rouvière-Yaniv, J., Kideleva, E., Bensaid, A., Almeida, A. and Darlica, K. (1991). Protein HU and bacterial DNA supercoiling. In Mohan, S., Dow, C. and Colo, J. A. (Eds), Prokaryotic Structure and Function: a New Perspective. Symposia of the Society for General Microbiology, vol. 44, pp. 440.
32. Runswick, M. J., Powell, S. J., Nyren, P. and Walker, J. E. (1987). Sequence of the bovine mitochondrial phosphate carrier protein: structural relationship to ADP/ATP translocase and the brown fat mitochondrial uncoupling protein. EMBO J. 6, 1367-1373.
33. Saraste, M. and Walker, J. E. (1982). Internal sequence repeats and the path of polypeptide in mitochondrial ADP/ATP translocase. FEBS Lett. 144, 250-254.
34. Sikorski, R. S. and Hieter, P. (1989). A system of shuttle vector and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 122, 19-27.
35. Van Dyck, E., Brill, S. J., Stillman, B. and Foury, F. (1992a). Nuclear genes controlling yeast mitochondrial DNA metabolism: Characterization of the RIM1 and RIM2 gene products. Abstr. 9-15A. Abstr. 16th Int. Conf. on Yeast Genetics and Molecular Biology, 1992.
36. Van Dyck, E., Foury, F., Stillman, B. and Brill, S. J. (1992b). A single-strand DNA binding protein required for mitochondrial DNA replication in S. cerevisiae is homologous to E. coli SSB. EMBO J. 11, 3421-3430.
37. Van Tuyle, G. C. and McPherson, M. L. (1979). A compact form of rat liver mitochondrial DNA stabilized by bound proteins. J. Biol. Chem. 254, 6044-6053.
38. Zelenaya-Troitskaya, O., Perlman, P. S. and Butow, R. A. (1995). An enzyme in yeast mitochondria that catalyzes a step in branched-chain amino acid biosynthesis also functions in mitochondrial DNA stability. EMBO J. 14, 3268-3276.