The binding of UvrAB proteins to bubble and loop regions in duplex DNA

Journal of Biological Chemistry

Volumn 271, Issue 35, 1996, Pages 21462-21470

  Ahn, Byungchan ^a   Grossman, Lawrence ^a  

^a JOHNS HOPKINS BLOOMBERG SCHOOL OF PUBLIC HEALTH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ABC EXCINUCLEASE; COMPLEMENTARY DNA; DEOXYRIBONUCLEASE; DOUBLE STRANDED DNA; HELICASE; RNA POLYMERASE;

ARTICLE; BINDING AFFINITY; CONTROLLED STUDY; DNA DAMAGE; DNA REPAIR; DNA STRUCTURE; MICROCOCCUS LUTEUS; MOLECULAR RECOGNITION; NONHUMAN; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN DNA BINDING; SITE DIRECTED MUTAGENESIS; TRANSCRIPTION INITIATION;

ADENOSINE TRIPHOSPHATASES; BACTERIAL PROTEINS; BASE SEQUENCE; BIOLOGICAL TRANSPORT; BLOTTING, WESTERN; DNA DAMAGE; DNA HELICASES; DNA, RECOMBINANT; DNA-BINDING PROTEINS; DNA-DIRECTED RNA POLYMERASES; ESCHERICHIA COLI PROTEINS; KINETICS; MOLECULAR SEQUENCE DATA; POTASSIUM PERMANGANATE; PROTEIN BINDING; ULTRAVIOLET RAYS;

MICROCOCCUS LUTEUS;

EID: 0029831389     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.271.35.21462     Document Type: Article

References (40)

1. Caron, P. R., Kushner, S. R., and Grossman, L. (1985) Proc. Natl. Acad. Sci. U. S. A. 82, 4925-4929
2. Husain, I., van Houten, B., Thomas, D. C., Abdel, M. M., and Sancar, A. (1985) Proc. Natl. Acad. Sci. U. S. A. 82, 6774-6778
3. Oleykowski, C. A., Mayernik, J. A., Lim, S. E., Groopman, J. D., Grossman, L., Wogan, G. N., and Yeung, A. T. (1993) J. Biol. Chem. 268, 7990-8002
4. Friedberg, E. C., Walker, G. C., and Siede, W. (1995) DNA Repair and Mutagenesis, ASM Press, Washington, DC
5. Yeung, A. T., Mattes, W. B., Oh, E. Y., and Grossman, L. (1983) Proc. Natl. Acad. Sci. U. S. A. 80, 6157-6161
6. Sancar, A., and Rupp, W. D. (1983) Cell 33, 249-260
7. Mazur, S. J., and Grossman, L. (1991) Biochemistry 30, 4432-4443
8. van Houten, B., Gamper, H., Sancar, A., and Hearst, J. E. (1987) J. Biol. Chem. 262, 13180-13187
9. Oh, E. Y., and Grossman, L. (1986) Nucleic Acids Res. 14, 8557-8571
10. Wang, J., Mueller, K. L., and Grossman, L. (1994) J. Biol. Chem. 269, 10771-10775
11. Orren, D. K., and Sancar, A. (1989) Proc. Natl. Acad. Sci. U. S. A. 86, 5237-5241
12. Oh, E. Y., Claassen, L., Thiagalingam, S., Mazur, S., and Grossman, L. (1989) Nucleic Acids Res. 17, 4145-4159
13. Caron, P. R., and Grossman, L. (1988) Nucleic Acids Res. 18, 10891-10902
14. Seeley, T. W., and Grossman, L. (1989) Proc. Natl. Acad. Sci. U. S. A. 86, 6577-6581
15. Oh, E. Y., and Grossman, L. (1987) Proc. Natl. Acad. Sci. U. S. A. 84, 3638-3642
16. Oh, E. Y., and Grossman, L. (1989) J. Biol. Chem. 264, 1336-1343
17. Oh, E. Y. (1987) Mechanism of DNA Repair. Ph.D. thesis, Johns Hopkins University, Baltimore, MD
18. Koo, H. S., Claassen, L., Grossman, L., and Liu, L. F. (1991) Proc Natl. Acad. Sci. U. S. A. 88, 1212-1216
19. Grossman, L., and Thiagalingam, S. (1993) J. Biol. Chem. 268, 16871-16874
20. Yeung, A. T., Mattes, W. B., Oh, E. Y., Yoakum, G. H., and Grossman, L. (1986a) Nucleic Acids Res. 14, 8535-8556
21. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
22. Kovalsky O. I., and Grossman, L. (1994) J. Biol. Chem. 269, 27421-27426
23. Sasse-Dwight, S., and Gralla, J. D. (1989) J. Biol. Chem. 264, 8074-8081
24. Lee, D. N., and Landick, R. (1992) J. Mol. Biol. 228, 759-777
25. Maxam, A. M., and Gilbert, W. (1980) Methods Enzymol. 65, 499-560
26. Grafstrom, R. H., Park, L., and Grossman, L. (1982) J. Biol. Chem. 257, 13465-13474
27. Reardon, J. T., Michels, A. F., Keeney, S., Smith, C. A., Taylor, J.-S., Linn, S., and Sancar, A. (1993) J. Biol. Chem. 268, 21301-21308
28. Yeung, A. T., Mattes, W. B., and Grossman, L. (1986b) Nucleic Acids Res. 14, 2567-2582
29. Snowden, A., and Van Houten, B. (1991) J. Mol. Biol. 220, 19-33
30. Hayatsu, H., and Ukita, T. (1967) Biochem. Biophys. Res. Commun. 29, 556-561
31. Rubin, C. M., and Schmid, C. W. (1980) Nucleic Acids Res. 8, 4613-4619
32. Linn, S. M., and Roberts, R. J. (1985) Nucleuses, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
33. Orren, D. K., and Sancar, A. (1990) J. Biol. Chem. 265, 15796-15803
34. Daube, S. S., and von Hippel, P. H. (1992) Science 258, 1320-1324
35. Aiyar, S. E., Helmann, J. D., and deHaseth, P. L. (1994) J. Biol Chem. 269, 13179-13184
36. Kornberg, A., and Baker, T. A. (1992) DNA Replication, New York, W. H. Freeman & Co.
37. Tsao, Y. P., Wu, H. Y., and Liu, L. F. (1989) Cell 56, 111-118
38. Riggs, A. D., Bourgeois, S., and Cohn, M. (1970) J. Mol. Biol. 53, 401-407
39. Ahn, B., and Grossman, L. (1996) J. Biol. Chem. 271, 21453-21461
40. Kunkel, T. A., Roberts, J. D., and Zakour, R. A. (1987) Methods Enzymol. 154, 367-382