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Volumn 12, Issue 14, 1996, Pages 1475-1481

Nucleotide sequence analysis of a 40 kb segment on the right arm of yeast chromosome XV reveals 18 open reading frames including a new pyruvate kinase and three homologues to chromosome I genes

Author keywords

chromosome XV; CIN1; MNE; MRE4; PUT4; pyruvate kinase; REV1; RPA190; RPA43; Saccharomyces cerevisiae; SGC1; TEA1; tRNA( Met); tRNA(Pro); Ty2; TYE7; ubiquitin conjugating enzyme; YAL034; YAL037

Indexed keywords

PYRUVATE KINASE; UBIQUITIN;

EID: 0029828730     PISSN: 0749503X     EISSN: None     Source Type: Journal    
DOI: 10.1002/(SICI)1097-0061(199611)12:14<1475::AID-YEA32>3.0.CO;2-V     Document Type: Article
Times cited : (3)

References (40)
  • 1
    • 0027340369 scopus 로고
    • The yeast initiator tRNA-Met can act as elongator tRNA-Met in vivo
    • Aaström, S. U., von Pawel-Rammingen, U. and Byström, A. S. (1993). The yeast initiator tRNA-Met can act as elongator tRNA-Met in vivo. J. Mol. Biol. 233, 45-58.
    • (1993) J. Mol. Biol. , vol.233 , pp. 45-58
    • Aaström, S.U.1    Von Pawel-Rammingen, U.2    Byström, A.S.3
  • 2
    • 0025882349 scopus 로고
    • PROSITE: A dictionary of sites and patterns in proteins
    • Bairoch, A. (1991). PROSITE: a dictionary of sites and patterns in proteins. Nucl. Acids Res. 19, 2241-2245.
    • (1991) Nucl. Acids Res. , vol.19 , pp. 2241-2245
    • Bairoch, A.1
  • 3
    • 0025484183 scopus 로고
    • The yeast regulatory gene PHO4 encodes a helix-loop-helix motif
    • Berben, G., Legrain, M., Gilliquet, V. and Hilger, F. (1990). The yeast regulatory gene PHO4 encodes a helix-loop-helix motif. Yeast 6, 451-454.
    • (1990) Yeast , vol.6 , pp. 451-454
    • Berben, G.1    Legrain, M.2    Gilliquet, V.3    Hilger, F.4
  • 4
    • 0000368742 scopus 로고
    • Yeast transposable elements
    • Broach, J. R., Pringle, J. R. and Jones, E. W. (Eds), Cold Spring Harbor Laboratory Press, New York
    • Boeke, J. D. and Sandmeyer, S. B. (1991). Yeast transposable elements. In Broach, J. R., Pringle, J. R. and Jones, E. W. (Eds), Molecular and Cellular Biology of the Yeast Saccharomyces, vol. 1. Cold Spring Harbor Laboratory Press, New York, pp. 193-262.
    • (1991) Molecular and Cellular Biology of the Yeast Saccharomyces , vol.1 , pp. 193-262
    • Boeke, J.D.1    Sandmeyer, S.B.2
  • 5
    • 0020580026 scopus 로고
    • The isolation, characterization and sequence of the pyruvate kinase gene of Saccharomyces cerevisiae
    • Burke, R. L., Tekamp-Olson, P. and Najarian, R. (1983). The isolation, characterization and sequence of the pyruvate kinase gene of Saccharomyces cerevisiae. J. Biol. Chem. 258, 2193-2201.
    • (1983) J. Biol. Chem. , vol.258 , pp. 2193-2201
    • Burke, R.L.1    Tekamp-Olson, P.2    Najarian, R.3
  • 6
    • 0029054927 scopus 로고
    • The nucleotide sequence of chromosome I from Saccharomyces cerevisiae
    • Bussey, H., Kaback, D. B., Zhong, W., et al. (1995). The nucleotide sequence of chromosome I from Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 92, 3809-3813.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 3809-3813
    • Bussey, H.1    Kaback, D.B.2    Zhong, W.3
  • 7
    • 0021956741 scopus 로고
    • Nucleotide sequence of a yeast Ty element: Evidence for an unusual mechanism of gene expression
    • Clare, J. J. and Farabaugh, P. (1985). Nucleotide sequence of a yeast Ty element: evidence for an unusual mechanism of gene expression. Proc. Natl. Acad. Sci. USA 82, 2829-2833.
    • (1985) Proc. Natl. Acad. Sci. USA , vol.82 , pp. 2829-2833
    • Clare, J.J.1    Farabaugh, P.2
  • 8
    • 0021760092 scopus 로고
    • A comprehensive set of sequences and analysis programs for the VAX
    • Devereux, J., Haeberli, P. and Smithies, O. (1984). A comprehensive set of sequences and analysis programs for the VAX. Nucl. Acids Res. 12, 387-395.
    • (1984) Nucl. Acids Res. , vol.12 , pp. 387-395
    • Devereux, J.1    Haeberli, P.2    Smithies, O.3
  • 9
    • 0020480512 scopus 로고
    • Recognition of protein coding regions in DNA sequences
    • Fickett, J. W. (1982). Recognition of protein coding regions in DNA sequences. Nucl. Acids Res. 10, 5303-5318.
    • (1982) Nucl. Acids Res. , vol.10 , pp. 5303-5318
    • Fickett, J.W.1
  • 10
    • 0027183678 scopus 로고
    • How many yeast genes code for membrane-spanning proteins?
    • Goffeau, A., Slonimski, P., Nakai, K. and Risler, J. L. (1993). How many yeast genes code for membrane-spanning proteins? Yeast 9, 691-702.
    • (1993) Yeast , vol.9 , pp. 691-702
    • Goffeau, A.1    Slonimski, P.2    Nakai, K.3    Risler, J.L.4
  • 11
    • 0029656067 scopus 로고    scopus 로고
    • Isolation and analysis of the yeast TEA1 gene, which encodes a zinc cluster Ty enhancer-binding protein
    • Gray, W. M. and Fassler, J. S. (1996). Isolation and analysis of the yeast TEA1 gene, which encodes a zinc cluster Ty enhancer-binding protein. Mol. Cell. Biol. 16, 347-358.
    • (1996) Mol. Cell. Biol. , vol.16 , pp. 347-358
    • Gray, W.M.1    Fassler, J.S.2
  • 12
    • 0026589242 scopus 로고
    • Molecular analysis of Saccharomyces cerevisiae chromosome I. on the number of genes and the identification of essential genes using temperature-sensitive-lethal mutations
    • Harris, S. D., Cheng, J., Pugh, T. A., and Pringle, J. R. (1992). Molecular analysis of Saccharomyces cerevisiae chromosome I. On the number of genes and the identification of essential genes using temperature-sensitive-lethal mutations. J. Mol. Biol. 225, 53-65.
    • (1992) J. Mol. Biol. , vol.225 , pp. 53-65
    • Harris, S.D.1    Cheng, J.2    Pugh, T.A.3    Pringle, J.R.4
  • 13
    • 0020572457 scopus 로고
    • Positive regulation in the general amino acid control of Saccharomyces cerevisiae
    • Hinnebusch, A. G. and Fink, G. R. (1983). Positive regulation in the general amino acid control of Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 80, 5374-5378.
    • (1983) Proc. Natl. Acad. Sci. USA , vol.80 , pp. 5374-5378
    • Hinnebusch, A.G.1    Fink, G.R.2
  • 14
    • 0025174216 scopus 로고
    • Chromosome instability mutants of Saccharomyces cerevisiae that are defective in microtubule-mediated processes
    • Hoyt, M. A., Stearns, T. and Botstein, D. (1990). Chromosome instability mutants of Saccharomyces cerevisiae that are defective in microtubule-mediated processes. Mol. Cell. Biol. 10, 223-234.
    • (1990) Mol. Cell. Biol. , vol.10 , pp. 223-234
    • Hoyt, M.A.1    Stearns, T.2    Botstein, D.3
  • 15
    • 0025315105 scopus 로고
    • Ubiquitin-conjugating enzymes: Novel regulators of eukaryotic cells
    • Jentsch, S., Seufert, W., Sommer, T. and Reins, H.-A. (1990). Ubiquitin-conjugating enzymes: novel regulators of eukaryotic cells. Trends Biochem. Sci. 15, 195-198.
    • (1990) Trends Biochem. Sci. , vol.15 , pp. 195-198
    • Jentsch, S.1    Seufert, W.2    Sommer, T.3    Reins, H.-A.4
  • 16
    • 0027192351 scopus 로고
    • Hotspots for unselected Tyl transposition events on yeast chromosome III are near tRNA genes and LTR sequences
    • Ji, H., Moore, D. P., Blomberg, M. A., et al. (1993). Hotspots for unselected Tyl transposition events on yeast chromosome III are near tRNA genes and LTR sequences. Cell 73, 1007-1018.
    • (1993) Cell , vol.73 , pp. 1007-1018
    • Ji, H.1    Moore, D.P.2    Blomberg, M.A.3
  • 17
    • 0029120278 scopus 로고
    • Analysis of spontaneous frameshift mutations in REV1 and rev1-1 strains of Saccharomyces cerevisiae
    • Kalinowski, D. P., Larimer, F. W. and Plewa, M. J. (1995). Analysis of spontaneous frameshift mutations in REV1 and rev1-1 strains of Saccharomyces cerevisiae. Mutat. Res. 331, 149-159.
    • (1995) Mutat. Res. , vol.331 , pp. 149-159
    • Kalinowski, D.P.1    Larimer, F.W.2    Plewa, M.J.3
  • 18
    • 0021847027 scopus 로고
    • The detection and classification of membrane-spanning proteins
    • Klein, P., Kanehisa, M. and DeLisi, C. (1985). The detection and classification of membrane-spanning proteins. Biochim. Biophys. Acta 815, 468-476.
    • (1985) Biochim. Biophys. Acta , vol.815 , pp. 468-476
    • Klein, P.1    Kanehisa, M.2    DeLisi, C.3
  • 19
    • 0024526246 scopus 로고
    • The REV1 gene of Saccharomyces cerevisiae: Isolation, sequence, and functional analysis
    • Larimer, F. W., Perry, J. R. and Hardigree, A. A. (1989). The REV1 gene of Saccharomyces cerevisiae: isolation, sequence, and functional analysis. J. Bacteriol. 171, 230-237.
    • (1989) J. Bacteriol. , vol.171 , pp. 230-237
    • Larimer, F.W.1    Perry, J.R.2    Hardigree, A.A.3
  • 20
    • 0026567640 scopus 로고
    • The MRE4 gene encodes a novel protein kinase homologue required for meiotic recombination in Saccharomyces cerevisiae
    • Leem, S. H. and Ogawa, H. (1992). The MRE4 gene encodes a novel protein kinase homologue required for meiotic recombination in Saccharomyces cerevisiae. Nucl. Acids Res. 20, 449-457.
    • (1992) Nucl. Acids Res. , vol.20 , pp. 449-457
    • Leem, S.H.1    Ogawa, H.2
  • 21
    • 0028171210 scopus 로고
    • The TYE7 gene of Saccharomyces cerevisiae encodes a putative bHLH-LZ transcription factor required for Tyl-mediated gene expression
    • Löhning, C. and Ciriacy, M. (1994). The TYE7 gene of Saccharomyces cerevisiae encodes a putative bHLH-LZ transcription factor required for Tyl-mediated gene expression. Yeast 10, 1329-1339.
    • (1994) Yeast , vol.10 , pp. 1329-1339
    • Löhning, C.1    Ciriacy, M.2
  • 22
    • 0024603438 scopus 로고
    • The yeast pyruvate kinase gene does not contain a string of non-preferred codons: Revised nucleotide sequence
    • McNally, T., Purvis, I. J., Fothergill-Gilmore, L. A. and Brown, A. J. (1989). The yeast pyruvate kinase gene does not contain a string of non-preferred codons: revised nucleotide sequence. FEBS Lett. 247, 312-316.
    • (1989) FEBS Lett. , vol.247 , pp. 312-316
    • McNally, T.1    Purvis, I.J.2    Fothergill-Gilmore, L.A.3    Brown, A.J.4
  • 23
    • 0023828763 scopus 로고
    • RPA190, the gene coding for the largest subunit of yeast RNA polymerase A
    • Mémet, S., Gouy, M., Marck, C., Sentenac, A. and Buhler, J.-M. (1988). RPA190, the gene coding for the largest subunit of yeast RNA polymerase A. J. Biol. Chem. 263, 2830-2839.
    • (1988) J. Biol. Chem. , vol.263 , pp. 2830-2839
    • Mémet, S.1    Gouy, M.2    Marck, C.3    Sentenac, A.4    Buhler, J.-M.5
  • 24
    • 0025219581 scopus 로고
    • Isoenzymes of pyruvate kinase
    • Muirhead, H. (1990). Isoenzymes of pyruvate kinase. Biochem. Soc. Trans. 18, 193-196.
    • (1990) Biochem. Soc. Trans. , vol.18 , pp. 193-196
    • Muirhead, H.1
  • 25
    • 0027105007 scopus 로고
    • A knowledge base for predicting protein localization sites in eukaryotic cells
    • Nakai, K. and Kanehisa, M. (1992). A knowledge base for predicting protein localization sites in eukaryotic cells. Genomics 14, 897-911.
    • (1992) Genomics , vol.14 , pp. 897-911
    • Nakai, K.1    Kanehisa, M.2
  • 26
    • 0028948313 scopus 로고
    • The GCR1 requirement for yeast glycolytic gene expression is suppressed by dominant mutations in the SGC1 gene, which encodes a novel basic-helix-loop-helix protein
    • Nishi, K., Park, C. S., Pepper, A. E., Eichinger, G., Innis, M. A. and Holland, M. J. (1995). The GCR1 requirement for yeast glycolytic gene expression is suppressed by dominant mutations in the SGC1 gene, which encodes a novel basic-helix-loop-helix protein. Mol. Cell. Biol. 15, 2646-2653.
    • (1995) Mol. Cell. Biol. , vol.15 , pp. 2646-2653
    • Nishi, K.1    Park, C.S.2    Pepper, A.E.3    Eichinger, G.4    Innis, M.A.5    Holland, M.J.6
  • 27
    • 0021768581 scopus 로고
    • Transfer RNA splicing in Saccharomyces cerevisiae: Defining the substrates
    • Ogden, R. C., Lee, M. C. and Knapp, G. (1984). Transfer RNA splicing in Saccharomyces cerevisiae: defining the substrates. Nucl. Acids Res. 12, 9367-9382.
    • (1984) Nucl. Acids Res. , vol.12 , pp. 9367-9382
    • Ogden, R.C.1    Lee, M.C.2    Knapp, G.3
  • 28
    • 0023046910 scopus 로고
    • DNA sequence analysis of ARS elements from chromosome III of Saccharomyces cerevisiae: Identification of a new conserved sequence
    • Palzkill, T. G., Oliver, S. G. and Newlon, C. S. (1986). DNA sequence analysis of ARS elements from chromosome III of Saccharomyces cerevisiae: identification of a new conserved sequence. Nucl. Acids Res. 14, 6247-6264.
    • (1986) Nucl. Acids Res. , vol.14 , pp. 6247-6264
    • Palzkill, T.G.1    Oliver, S.G.2    Newlon, C.S.3
  • 29
    • 0023989064 scopus 로고
    • Improved tools for biological sequence comparison
    • Pearson, W. R. and Lipman, D. J. (1988). Improved tools for biological sequence comparison. Proc. Natl. Acad. Sci. USA 85, 2444-2448.
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 30
    • 0011996056 scopus 로고
    • Identification of AAS genes and their regulatory role in general control of amino acid biosynthesis in yeast
    • Penn, M. D., Galgoci, B. and Greer, H. (1983). Identification of AAS genes and their regulatory role in general control of amino acid biosynthesis in yeast. Proc. Natl. Acad. Sci. USA 80, 2704-2708.
    • (1983) Proc. Natl. Acad. Sci. USA , vol.80 , pp. 2704-2708
    • Penn, M.D.1    Galgoci, B.2    Greer, H.3
  • 31
    • 0026497628 scopus 로고
    • The sequence of a 12 kb fragment on the left arm of yeast chromosome XI reveals five new open reading frames, including a zinc finger protein and a homolog of the UDP-glucose pyrophosphorylase from potato
    • Purnelle, B., Skala, J., Van Dyck, L. and Goffeau, A. (1992). The sequence of a 12 kb fragment on the left arm of yeast chromosome XI reveals five new open reading frames, including a zinc finger protein and a homolog of the UDP-glucose pyrophosphorylase from potato. Yeast 8, 977-986.
    • (1992) Yeast , vol.8 , pp. 977-986
    • Purnelle, B.1    Skala, J.2    Van Dyck, L.3    Goffeau, A.4
  • 32
    • 0028033615 scopus 로고
    • The sequence of a 36 kb segment on the left arm of yeast chromosome X identifies 24 open reading frames including NUC1, PRP21 (SPP91), CDC6, CRY2, the gene for S24, a homologue to the aconitase gene ACO1 and two homologues to chromosome III genes
    • Purnelle, B., Coster, F. and Goffeau, A. (1994). The sequence of a 36 kb segment on the left arm of yeast chromosome X identifies 24 open reading frames including NUC1, PRP21 (SPP91), CDC6, CRY2, the gene for S24, a homologue to the aconitase gene ACO1 and two homologues to chromosome III genes. Yeast 10, 1235-1249.
    • (1994) Yeast , vol.10 , pp. 1235-1249
    • Purnelle, B.1    Coster, F.2    Goffeau, A.3
  • 33
    • 0021925909 scopus 로고
    • RAD6 gene of Saccharomyces cerevisiae encodes a protein containing a tract of 13 consecutive aspartates
    • Reynolds, P., Weber, S. and Prakash, L. (1985). RAD6 gene of Saccharomyces cerevisiae encodes a protein containing a tract of 13 consecutive aspartates. Proc. Natl. Acad. Sci. USA 82, 168-172.
    • (1985) Proc. Natl. Acad. Sci. USA , vol.82 , pp. 168-172
    • Reynolds, P.1    Weber, S.2    Prakash, L.3
  • 34
    • 0026267294 scopus 로고
    • A meiosis-specific protein kinase homolog required for chromosome synapsis and recombination
    • Rockmill, B. and Roeder, G. S. (1991). A meiosis-specific protein kinase homolog required for chromosome synapsis and recombination. Genes Dev. 5, 2392-2404.
    • (1991) Genes Dev. , vol.5 , pp. 2392-2404
    • Rockmill, B.1    Roeder, G.S.2
  • 35
    • 0023650543 scopus 로고
    • The codon adaptation index, a measure of directional synonymous codon usage bias, and its potential applications
    • Sharp, P. M. and Li, W. H. (1987). The codon adaptation index, a measure of directional synonymous codon usage bias, and its potential applications. Nucl. Acids Res. 15, 1281-1295.
    • (1987) Nucl. Acids Res. , vol.15 , pp. 1281-1295
    • Sharp, P.M.1    Li, W.H.2
  • 36
    • 0024533115 scopus 로고
    • The SSA1 and SSA2 genes of the yeast Saccharomyces cerevisiae
    • Slater, M. R. and Craig, E. A. (1989). The SSA1 and SSA2 genes of the yeast Saccharomyces cerevisiae. Nucl. Acids Res. 17, 805-806.
    • (1989) Nucl. Acids Res. , vol.17 , pp. 805-806
    • Slater, M.R.1    Craig, E.A.2
  • 37
    • 0025057481 scopus 로고
    • Yeast mutants sensitive to antimicrotubule drugs define three genes that affect microtubule function
    • Stearns, T., Hoyt, M. A. and Botstein, D. (1990). Yeast mutants sensitive to antimicrotubule drugs define three genes that affect microtubule function. Genetics 124, 251-262.
    • (1990) Genetics , vol.124 , pp. 251-262
    • Stearns, T.1    Hoyt, M.A.2    Botstein, D.3
  • 38
    • 0028972077 scopus 로고
    • Gene RPA43 in Saccharomyces cerevisiae encodes an essential subunit of RNA polymerase I
    • Thuriaux, P., Mariotte, S., Buhler, J.-M., et al. (1995). Gene RPA43 in Saccharomyces cerevisiae encodes an essential subunit of RNA polymerase I. J. Biol. Chem. 270, 24252-24257.
    • (1995) J. Biol. Chem. , vol.270 , pp. 24252-24257
    • Thuriaux, P.1    Mariotte, S.2    Buhler, J.-M.3
  • 39
    • 0024470598 scopus 로고
    • Nucleotide sequence of the Saccharomyces cerevisiae PUT4 proline-permease-encoding gene: Similarities between CAN1, HIP1 and PUT4 permeases
    • Vandenbol, M., Jauniaux, J.-C. and Grenson, M. (1989). Nucleotide sequence of the Saccharomyces cerevisiae PUT4 proline-permease-encoding gene: similarities between CAN1, HIP1 and PUT4 permeases. Gene 83, 153-159.
    • (1989) Gene , vol.83 , pp. 153-159
    • Vandenbol, M.1    Jauniaux, J.-C.2    Grenson, M.3
  • 40
    • 0022432416 scopus 로고
    • Nucleotide sequence characterization of Tyl-17, a class II transposon from yeast
    • Warmington, J. R., Waring, R. B., Newlon, C. S., Indge, K. J. and Oliver, S. G. (1985). Nucleotide sequence characterization of Tyl-17, a class II transposon from yeast. Nucl. Acids Res. 13, 6679-6693.
    • (1985) Nucl. Acids Res. , vol.13 , pp. 6679-6693
    • Warmington, J.R.1    Waring, R.B.2    Newlon, C.S.3    Indge, K.J.4    Oliver, S.G.5


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