메뉴 건너뛰기




Volumn 78, Issue 6, 1996, Pages 390-398

Bacterial poly(A) polymerase: An enzyme that modulates RNA stability

Author keywords

Poly(A) polymerase; RNA degradation; RNA degradosome; RNA polyadenylation

Indexed keywords

ANTISERUM; BACTERIAL PROTEIN; BACTERIAL RNA; POLYNUCLEOTIDE ADENYLYLTRANSFERASE; RECOMBINANT PROTEIN;

EID: 0029827261     PISSN: 03009084     EISSN: None     Source Type: Journal    
DOI: 10.1016/0300-9084(96)84745-6     Document Type: Article
Times cited : (21)

References (50)
  • 1
    • 0026475908 scopus 로고
    • Identification of the gene for an Escherichia coli poly(A) polymerase
    • 1 Cao GJ, Sarkar N (1992) Identification of the gene for an Escherichia coli poly(A) polymerase. Proc Natl Acad Sci USA 89, 10380-10384
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 10380-10384
    • Cao, G.J.1    Sarkar, N.2
  • 2
    • 0022921901 scopus 로고
    • Mutations in a new chromosomal gene of Escherichia coli K-12, pcnB, reduce plasmid copy number of pBR322 and its derivatives
    • 2 Lopilato J, Bortner S, Beckwith J (1986) Mutations in a new chromosomal gene of Escherichia coli K-12, pcnB, reduce plasmid copy number of pBR322 and its derivatives. Mol Gen Genet 205, 285-290
    • (1986) Mol Gen Genet , vol.205 , pp. 285-290
    • Lopilato, J.1    Bortner, S.2    Beckwith, J.3
  • 3
    • 0024357381 scopus 로고
    • Cloning and characterization of an Escherichia coli gene, pcnB, affecting plasmid copy number
    • 3 March JB, Collom MD, Hart-Davis D, Oliver IR, Master M (1989) Cloning and characterization of an Escherichia coli gene, pcnB, affecting plasmid copy number. Mol Microbiol 3, 903-910
    • (1989) Mol Microbiol , vol.3 , pp. 903-910
    • March, J.B.1    Collom, M.D.2    Hart-Davis, D.3    Oliver, I.R.4    Master, M.5
  • 4
    • 0024565620 scopus 로고
    • Genetics and sequence analysis of the pcnB locus, an Escherichia coli gene involved in plasmid copy number control
    • 4 Liu JD, Parkinson JS (1989) Genetics and sequence analysis of the pcnB locus, an Escherichia coli gene involved in plasmid copy number control. J Bacteriol 171, 1254-1261
    • (1989) J Bacteriol , vol.171 , pp. 1254-1261
    • Liu, J.D.1    Parkinson, J.S.2
  • 5
    • 0027266028 scopus 로고
    • The pcnB gene of Escherichia coli, which is required for ColE1 copy number maintenance, is dispensable
    • 5 Masters M, Colloms MD, Oliver IR, He L, MacNaughton EJ, Charters Y (1993) The pcnB gene of Escherichia coli, which is required for ColE1 copy number maintenance, is dispensable. J Bacteriol 175, 4405-4413
    • (1993) J Bacteriol , vol.175 , pp. 4405-4413
    • Masters, M.1    Colloms, M.D.2    Oliver, I.R.3    He, L.4    MacNaughton, E.J.5    Charters, Y.6
  • 6
    • 0027267498 scopus 로고
    • The Escherichia coli pcnB gene promotes adenylation of antisense RNAI of ColE1-type plasmids in vivo and degradation of RNAI decay intermediates
    • 6 Xu F, Lin-Chao S, Cohen SN (1993). The Escherichia coli pcnB gene promotes adenylation of antisense RNAI of ColE1-type plasmids in vivo and degradation of RNAI decay intermediates. Proc Natl Acad Sci USA 90, 6756-6760
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 6756-6760
    • Xu, F.1    Lin-Chao, S.2    Cohen, S.N.3
  • 7
    • 0027423483 scopus 로고
    • PcnB is required for the rapid degradation of RNAI, the antisense RNA that controls the copy number of ColE1 related plasmids
    • 7 He L, Söderbom F, Gerhart E, Wagner H, Binnie U, Binns N, Masters M (1993) PcnB is required for the rapid degradation of RNAI, the antisense RNA that controls the copy number of ColE1 related plasmids. Mol Microbiol 9, 1131-1142
    • (1993) Mol Microbiol , vol.9 , pp. 1131-1142
    • He, L.1    Söderbom, F.2    Gerhart, E.3    Wagner, H.4    Binnie, U.5    Binns, N.6    Masters, M.7
  • 8
    • 0024272030 scopus 로고
    • ColE1 replication control circuitry: Sense from antisense
    • 8 Polisky B (1988) ColE1 replication control circuitry: sense from antisense. Cell 55, 929-932
    • (1988) Cell , vol.55 , pp. 929-932
    • Polisky, B.1
  • 10
    • 0028945837 scopus 로고
    • RNA degradation in Escherichia coli regulated by 3′ adenylation and 5′ phosphorylation
    • 10 Xu F, Cohen SN (1995) RNA degradation in Escherichia coli regulated by 3′ adenylation and 5′ phosphorylation. Nature 374, 180-183
    • (1995) Nature , vol.374 , pp. 180-183
    • Xu, F.1    Cohen, S.N.2
  • 14
    • 0001684759 scopus 로고
    • Ribonucleic acid-dependent ribonucleotide incorporation
    • 14 August JT, Ortiz J, Hurwitz J (1962) Ribonucleic acid-dependent ribonucleotide incorporation. J Biol Chem 237, 3786-3793
    • (1962) J Biol Chem , vol.237 , pp. 3786-3793
    • August, J.T.1    Ortiz, J.2    Hurwitz, J.3
  • 15
    • 0028927051 scopus 로고
    • A complex protein assembly catalyzes polyadenylation of mRNA precursors
    • 15 Manley JL (1995) A complex protein assembly catalyzes polyadenylation of mRNA precursors. Curr Opin Genet Dev 5, 222-228
    • (1995) Curr Opin Genet Dev , vol.5 , pp. 222-228
    • Manley, J.L.1
  • 16
    • 0027279421 scopus 로고
    • Messenger RNA degradation in eukaryotes
    • 16 Sachs A (1993) Messenger RNA degradation in eukaryotes. Cell 74, 413-421
    • (1993) Cell , vol.74 , pp. 413-421
    • Sachs, A.1
  • 17
    • 0025290642 scopus 로고
    • Do the poly(A) tail and 3′ untranslated region control mRNA translation?
    • 17 Jackson RJ, Standart N (1990) Do the poly(A) tail and 3′ untranslated region control mRNA translation? Cell 62, 15-24
    • (1990) Cell , vol.62 , pp. 15-24
    • Jackson, R.J.1    Standart, N.2
  • 18
    • 0003395950 scopus 로고
    • Polynucleotide phosphorylase and RNase II are required for cell viability and mRNA turnover in E coli K-12
    • 18 Donovan P, Kushner SE (1986) Polynucleotide phosphorylase and RNase II are required for cell viability and mRNA turnover in E coli K-12. Proc Natl Acad Sci USA 83, 120-124
    • (1986) Proc Natl Acad Sci USA , vol.83 , pp. 120-124
    • Donovan, P.1    Kushner, S.E.2
  • 19
    • 0024244201 scopus 로고
    • Mechanisms of mRNA decay in bacteria: A perspective
    • 19 Belasco JG, CF Higgins (1988) Mechanisms of mRNA decay in bacteria: a perspective. Gene 72, 15-23
    • (1988) Gene , vol.72 , pp. 15-23
    • Belasco, J.G.1    Higgins, C.F.2
  • 20
    • 0023667782 scopus 로고
    • Stabilization of translationally active mRNA by prokaryotic REP sequences
    • 20 Newbury SF, Smith NH, Robinson EC, Hiles ID, Higgins CF (1987) Stabilization of translationally active mRNA by prokaryotic REP sequences. Cell 48, 297-310
    • (1987) Cell , vol.48 , pp. 297-310
    • Newbury, S.F.1    Smith, N.H.2    Robinson, E.C.3    Hiles, I.D.4    Higgins, C.F.5
  • 21
    • 0025740223 scopus 로고
    • mRNA degradation by processive 3′-5′ exoridonucleases in vitro and the implication for procaryotic mRNA decay in vivo
    • 21 McLaren, RS, Newbury, SF, Dance, GSC, Causton, HC, Higgins, CF (1991) mRNA degradation by processive 3′-5′ exoridonucleases in vitro and the implication for procaryotic mRNA decay in vivo. J Mol Biol 221, 81-95
    • (1991) J Mol Biol , vol.221 , pp. 81-95
    • McLaren, R.S.1    Newbury, S.F.2    Dance, G.S.C.3    Causton, H.C.4    Higgins, C.F.5
  • 22
    • 0028269435 scopus 로고
    • Copurification of E coli RNase E and PNPase: Evidence for a specific association between two enzymes important in RNA processing and degradation
    • 22 Carpousis AJ, Van Houwe G, Ehretsmann C, Krisch HM (1994) Copurification of E coli RNase E and PNPase: evidence for a specific association between two enzymes important in RNA processing and degradation. Cell 76, 889-900
    • (1994) Cell , vol.76 , pp. 889-900
    • Carpousis, A.J.1    Van Houwe, G.2    Ehretsmann, C.3    Krisch, H.M.4
  • 23
    • 0027945686 scopus 로고
    • A protein complex mediating mRNA degradation in Escherichia coli
    • 23 Py B, Causton H, Mudd EA, Higgins CF (1994) A protein complex mediating mRNA degradation in Escherichia coli. Mol Microbiol 14, 717-729
    • (1994) Mol Microbiol , vol.14 , pp. 717-729
    • Py, B.1    Causton, H.2    Mudd, E.A.3    Higgins, C.F.4
  • 24
    • 0029922992 scopus 로고    scopus 로고
    • A DEAD-box RNA helicase in the Escherichia coli RNA degradosome
    • 24 Py B, Higgins CF, Krisch HM, Carpousis AJ (1996) A DEAD-box RNA helicase in the Escherichia coli RNA degradosome. Nature 381, 169-172
    • (1996) Nature , vol.381 , pp. 169-172
    • Py, B.1    Higgins, C.F.2    Krisch, H.M.3    Carpousis, A.J.4
  • 25
    • 0025943266 scopus 로고
    • RhlB, a new Escherichia coli K-12 gene with an RNA helicase-like protein sequence motif, one of at least five possible genes in a prokaryote
    • 25 Kalman M, Murphy H, Cashel M (1991) RhlB, a new Escherichia coli K-12 gene with an RNA helicase-like protein sequence motif, one of at least five possible genes in a prokaryote. New Biol 3, 886-895
    • (1991) New Biol , vol.3 , pp. 886-895
    • Kalman, M.1    Murphy, H.2    Cashel, M.3
  • 26
    • 0024117856 scopus 로고
    • Processing of unstable bacteriophage T4 gene 32 species into a stable species requires Escherichia coli ribonuclease E
    • 26 Mudd EA, Prentki P, Belin D, Krisch, HM (1988) Processing of unstable bacteriophage T4 gene 32 species into a stable species requires Escherichia coli ribonuclease E. EMBO J 7, 3601-3607
    • (1988) EMBO J , vol.7 , pp. 3601-3607
    • Mudd, E.A.1    Prentki, P.2    Belin, D.3    Krisch, H.M.4
  • 27
    • 0025361818 scopus 로고
    • Escherichia coli RNase E has a role in the decay of bacteriophage T4 mRNA
    • 27 Mudd EA, Carpousis AJ, Krisch HM (1990) Escherichia coli RNase E has a role in the decay of bacteriophage T4 mRNA. Genes Dev 4, 873-881
    • (1990) Genes Dev , vol.4 , pp. 873-881
    • Mudd, E.A.1    Carpousis, A.J.2    Krisch, H.M.3
  • 28
    • 0025688893 scopus 로고
    • RNase E, an endoribonuclease, has a general role in the chemical decay of Escherichia coli mRNA: Evidence that rne and ams are the same genetic locus
    • 28 Mudd EA, Krisch HM, Higgins CF (1990) RNase E, an endoribonuclease, has a general role in the chemical decay of Escherichia coli mRNA: evidence that rne and ams are the same genetic locus. Mol Microbiol 4, 2127-2135
    • (1990) Mol Microbiol , vol.4 , pp. 2127-2135
    • Mudd, E.A.1    Krisch, H.M.2    Higgins, C.F.3
  • 29
    • 0025973574 scopus 로고
    • Decay of mRNA encoding ribosomal protein S15 of Escherichia coli is initiated by an RNase E-dependent endonucleolytic cleavage that removes the 3′ stabilizing stem and loop structure
    • 29 Régnier P, Hajnsdorf E (1991) Decay of mRNA encoding ribosomal protein S15 of Escherichia coli is initiated by an RNase E-dependent endonucleolytic cleavage that removes the 3′ stabilizing stem and loop structure. J Mol Biol 217, 283-292
    • (1991) J Mol Biol , vol.217 , pp. 283-292
    • Régnier, P.1    Hajnsdorf, E.2
  • 30
    • 0026492668 scopus 로고
    • Control of RNase E-mediated RNA degradation by 5′ terminal base pairing in E coli
    • 30 Bouvet P, Belasco JG (1992) Control of RNase E-mediated RNA degradation by 5′ terminal base pairing in E coli. Nature 360, 488-491
    • (1992) Nature , vol.360 , pp. 488-491
    • Bouvet, P.1    Belasco, J.G.2
  • 31
    • 0025814610 scopus 로고
    • The rate of processing and degradation of antisense RNAI regulates the replication of ColE1-type plasmids in vivo
    • 31 Lin-Chao S, Cohen SN (1991) The rate of processing and degradation of antisense RNAI regulates the replication of ColE1-type plasmids in vivo. Cell 65, 1233-1242
    • (1991) Cell , vol.65 , pp. 1233-1242
    • Lin-Chao, S.1    Cohen, S.N.2
  • 35
    • 0026559344 scopus 로고
    • Specificity of E coli endoribonuclease E: In vivo and in vitro analysis of mutants in a bacteriophage T4 mRNA processing site
    • 35 Ehretsmann C, Carpousis AJ, Krisch HM (1992) Specificity of E coli endoribonuclease E: in vivo and in vitro analysis of mutants in a bacteriophage T4 mRNA processing site. Genes Dev 6, 149-159
    • (1992) Genes Dev , vol.6 , pp. 149-159
    • Ehretsmann, C.1    Carpousis, A.J.2    Krisch, H.M.3
  • 36
    • 0024747886 scopus 로고
    • Transcription and messenger RNA processing of bacteriophage T4 gene 32
    • 36 Carpousis AJ, Mudd EA, Krisch HM (1989) Transcription and messenger RNA processing of bacteriophage T4 gene 32. Mol Gen Genet 219, 39-48
    • (1989) Mol Gen Genet , vol.219 , pp. 39-48
    • Carpousis, A.J.1    Mudd, E.A.2    Krisch, H.M.3
  • 37
    • 0027380985 scopus 로고
    • RNase E activity is conferred by a single polypeptide: Overexpression, purification, and properties of the ams / rne / hmp 1 gene product
    • 37 Cormack RS, Genereaux JL, Mackie GA (1993) RNase E activity is conferred by a single polypeptide: overexpression, purification, and properties of the ams / rne / hmp 1 gene product. Proc Natl Acad Sci USA 90, 9006-9010
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 9006-9010
    • Cormack, R.S.1    Genereaux, J.L.2    Mackie, G.A.3
  • 38
    • 0022553775 scopus 로고
    • Effects of the modification of transfer buffer composition and the renaturation of proteins in gels on the recognition of proteins on western blots by monoclonal antibodies
    • 38 Dunn SD (1986) Effects of the modification of transfer buffer composition and the renaturation of proteins in gels on the recognition of proteins on Western blots by monoclonal antibodies. Anal Biochem 157, 144-153
    • (1986) Anal Biochem , vol.157 , pp. 144-153
    • Dunn, S.D.1
  • 39
    • 0015838580 scopus 로고
    • Purification and characterization of adenosine triphosphate:Ribonucleic acid adenyltransferase from Escherichia coli
    • 39 Sippel AE (1973) Purification and characterization of adenosine triphosphate:ribonucleic acid adenyltransferase from Escherichia coli. Eur J Biochem 37, 31-40
    • (1973) Eur J Biochem , vol.37 , pp. 31-40
    • Sippel, A.E.1
  • 40
    • 0028923019 scopus 로고
    • Surprises at the 3′ end of prokaryotic RNA
    • 40 Cohen SN (1995) Surprises at the 3′ end of prokaryotic RNA. Cell 80, 829-832
    • (1995) Cell , vol.80 , pp. 829-832
    • Cohen, S.N.1
  • 41
    • 0030023247 scopus 로고    scopus 로고
    • Determining divergence times of the major kingdoms of living organisms with a protein clock
    • 41 Doolittle RF, Feng DF, Tsang S, Cho G, Little L (1996) Determining divergence times of the major kingdoms of living organisms with a protein clock. Science 271, 470-477
    • (1996) Science , vol.271 , pp. 470-477
    • Doolittle, R.F.1    Feng, D.F.2    Tsang, S.3    Cho, G.4    Little, L.5
  • 42
    • 0023096349 scopus 로고
    • Messenger ribonucleic acid for the lipoprotein of the Escherichia coli outer membrane is polyadenylated
    • 42 Taljanidisz J, Karnik P, Sarkar N (1987) Messenger ribonucleic acid for the lipoprotein of the Escherichia coli outer membrane is polyadenylated. J Mol Biol 193, 507-515
    • (1987) J Mol Biol , vol.193 , pp. 507-515
    • Taljanidisz, J.1    Karnik, P.2    Sarkar, N.3
  • 44
    • 0028234555 scopus 로고
    • Immunoaffinity purification of the Escherichia coli rne gene product
    • 44 Taraseviciene L, Naureckiene S, Uhlin BE (1994) Immunoaffinity purification of the Escherichia coli rne gene product. J Biol Chem 269, 12167-12172
    • (1994) J Biol Chem , vol.269 , pp. 12167-12172
    • Taraseviciene, L.1    Naureckiene, S.2    Uhlin, B.E.3
  • 45
    • 0028905847 scopus 로고
    • Identification of an mRNA element promoting rate-limiting cleavage of the polycistronic puf mRNA in Rhodobacter capsulatus by an enzyme similar to RNase E
    • 45 Fritsch J, Rothfuchs R, Rauhut R, Klug G (1995) Identification of an mRNA element promoting rate-limiting cleavage of the polycistronic puf mRNA in Rhodobacter capsulatus by an enzyme similar to RNase E. Mol Microbiol 15, 1017-1029
    • (1995) Mol Microbiol , vol.15 , pp. 1017-1029
    • Fritsch, J.1    Rothfuchs, R.2    Rauhut, R.3    Klug, G.4
  • 46
    • 0029917715 scopus 로고    scopus 로고
    • Chloroplast mRNA 3′-end processing by a high molecular encoded RNA binding proteins
    • 46 Hayes R, Kudla J, Schuster G, Gabay L, Maliga P, Gruissem W (1996) Chloroplast mRNA 3′-end processing by a high molecular encoded RNA binding proteins. EMBO J 15, 1132-1141
    • (1996) EMBO J , vol.15 , pp. 1132-1141
    • Hayes, R.1    Kudla, J.2    Schuster, G.3    Gabay, L.4    Maliga, P.5    Gruissem, W.6
  • 48
    • 0025020196 scopus 로고
    • A possible role for the pcnB gene product of Escherichia coli in modulating RNA:RNA interactions
    • 48 Masters M, March JB, Oliver IR, Collins JF (1990) A possible role for the pcnB gene product of Escherichia coli in modulating RNA:RNA interactions. Mol Gen Genet 220, 341-344
    • (1990) Mol Gen Genet , vol.220 , pp. 341-344
    • Masters, M.1    March, J.B.2    Oliver, I.R.3    Collins, J.F.4
  • 49
    • 0024234855 scopus 로고
    • CLUSTAL: A package for performing multiple sequence alignment on a microcomputer
    • 49 Higgins DG, Sharp PM (1988) CLUSTAL: a package for performing multiple sequence alignment on a microcomputer. Gene 73, 237-244
    • (1988) Gene , vol.73 , pp. 237-244
    • Higgins, D.G.1    Sharp, P.M.2
  • 50
    • 0024598146 scopus 로고
    • Fast and sensitive multiple sequence alignment on a microcomputer
    • 50 Higgins DG, Sharp PM (1989) Fast and sensitive multiple sequence alignment on a microcomputer. Comput Appl Biosci 5, 151-153
    • (1989) Comput Appl Biosci , vol.5 , pp. 151-153
    • Higgins, D.G.1    Sharp, P.M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.