Cloning, sequencing and overexpression in Escherichia coli of the alginate-lyase-encoding aly gene of Pseudomonas alginovora: Identification of three classes of alginate lyases

Biochemical Journal

Volumn 319, Issue 2, 1996, Pages 575-583

  Chavagnat, Frederic ^a,b   Duez, Colette ^b   Guinand, Micheline ^a   Potin, Philippe ^c   Barbeyron, Tristan ^c   Henrissat, Bernard ^d   Wallach, Jean ^a   Ghuysen, Jean Marie ^b  

^a UNIVERSITÉ LYON 1   (France)

^b UNIVERSITY OF LIÈGE   (Belgium)

^c STATION BIOLOGIQUE   (France)

^d CENTRE DE RECHERCHES SUR LES MACROMOLÉCULES VÉGÉTALES CERMAV CNRS   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ALGINIC ACID; BACTERIAL ENZYME; ENZYME PRECURSOR; LYASE; NITRILOTRIACETIC ACID;

AFFINITY CHROMATOGRAPHY; AMINO ACID SEQUENCE; ARTICLE; BACTERIAL GENE; CONTROLLED STUDY; ENZYME ACTIVITY; ENZYME PURIFICATION; ENZYME SPECIFICITY; ENZYME STRUCTURE; ESCHERICHIA COLI; GENE EXPRESSION; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROTEIN EXPRESSION; PSEUDOMONAS;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; KLEBSIELLA PNEUMONIAE; PSEUDOMONAS ALGINOVORA;

EID: 0029825399     PISSN: 02646021     EISSN: None     Source Type: Journal    
DOI: 10.1042/bj3190575     Document Type: Article

References (44)

1. Gacesa, P. and Russel, N. J. (1990) in Pseudomonas Infection and Alginates: Biochemistry, Genetics and Pathology (Gacesa, P. and Russel, N. J., eds.), pp. 29-49, Chapman and Hall, London
2. Skjäk-Braek, G., Grasdalen, H. and Larsen, B. (1986) Carbohydr. Res. 154, 239-250
3. Ramphal, R. and Pier, G. B. (1985) Infect. Immun. 47, 1-4
4. Simpson, J. A., Smith, S. E. and Dean, R. T. (1988) J. Gen. Microbiol. 134, 29-36
5. Nichols, W. W., Evans, M. J., Slack, M. P. E. and Walmsley, H. L. (1989) J. Gen. Microbiol. 135, 1291-1303
6. Pedersen, S. S. (1992) Acta Pathol. Microbiol. Immunol. Scand. 100 (Suppl. 28), 1-79
7. Gacesa, P. (1992) Int. J. Biochem. 24, 545-552
8. Sutherland, I. W. (1995) FEMS Microbiol. Rev. 16, 323-347
9. Murata, K., Inose, T., Hisano, T., Abe, S., Yonemoto, Y., Yamashita, T., Takagi, M., Sakaguchi, K., Kimura, A. and Imanaka, T. (1993) J. Ferment. Bioeng. 76, 427-437
10. Hisano, T., Yonemoto, Y., Yamashita, T., Fukuda, Y., Kimura, A. and Murata, K. (1995) J. Ferment. Bioeng. 79, 538-544
11. Yonemoto, Y., Tanaka, H., Hisano, T., Sakaguchi, K., Abe, S., Yamashita, T., Kimura, A. and Murata, K. (1993) J. Ferment. Bioeng. 75, 336-342
12. Malissard, M., Duez, C., Guinand, M., Vacheron, M. J., Michel, G., Marty, N., Joris, B., Thamm, I. and Ghuysen, J.-M. (1993) FEMS Microbiol. Lett. 110, 101-106
13. Maki, H., Mori, A., Fujiyama, K., Kinoshita, S. and Yoshida, T. (1993) J. Gen. Microbiol. 139, 987-993
14. Schiller, N. L., Monday, S. R., Boyd, C. M., Keen, N. T. and Ohman, D. E. (1993) J. Bacteriol. 175, 4780-4789
15. Boyd, A., Ghosh, M., May, T. B., Shinabarger, D., Keogh, R. and Chakrabarty, A. M. (1993) Gene 131, 1-8
16. Baron, A. J., Wong, T. Y., Hicks, S. J., Gacesa, P., Willcock, D. and McPherson, M. J. (1994) Gene 143, 61-66
17. Hisano, T., Nishimura, M., Yamashita, T., Sakaguchi, K., Takagi, M., Imanaka, T., Kimura, A. and Murata, K. (1994) J. Ferment Bioeng. 78, 79-83
18. Malissard, M., Chavagnat, F., Duez, C., Vacheron, M. J., Guinand, M., Michel, G. and Ghuysen, J.-M. (1995) FEMS Microbiol. Lett. 126, 105-112
19. Boyen, C., Bertheau, Y., Barbeyron, T. and Kloareg, B. (1990) Enzyme Microb. Technol. 12, 885-890
20. Sambrook, J., Fritsch, E. F. and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, 2nd edn., Cold Spring Harbor Laboratory Press, Cold Spring Harbor
21. Kamura, O., Ikeda, K., Fujiwara, K. and Motokawa, Y. (1992) J. Biol. Chem. 267, 18284-18290
22. Von Riesen, V. L. (1980) Appl. Environ. Microbiol. 39, 92-96
23. Karkhanis, Y. D., Zeltner, J. Y., Jackson, J. J. and Carlo, D. J. (1978) Anal. Biochem. 85, 595-601
24. Laemmli, U. K. and Favre, M. (1973) J. Mol. Biol. 80, 575-599
25. Matsudaira, P. (1987) J. Biol. Chem. 262, 10035-10038
26. Hopwood, D. A., Bibb, M. J., Chater, K. F., Kieser, T., Bruton, C. J., Kieser, H. M., Lydiate, D. J., Smith, C. P., Ward, J. M. and Schrempf, H. (1985) Genetic Manipulation of Streptomyces: A Laboratory Manual, The John Innes Foundation, Norwich
27. Birnboim, H. C. and Doly, J. (1979) Nucleic Acids Res. 7, 1513-1523
28. Sanger, F., Nicklen, S. and Coulson, A. R. (1977) Proc. Natl. Acad. Sci. U.S.A. 74, 5463-5467
29. Zhang, H., Scholl, R., Browse, J. and Somerville, C. (1988) Nucleic Acids Res. 16, 1220
30. Bradford, M. M. (1976) Anal. Biochem. 72, 248-254
31. Bourdenet, S., Vacheron, M. J., Guinand, M., Michel, G. and Arminjon, F. (1990) Eur. J. Biochem. 192, 379-385
32. Devereux, J., Haeberli, P. and Smithies, O. (1984) Nucleic Acids Res. 12, 387-395
33. Pearson, W. R. and Lipman, D. J. (1988) Proc. Natl. Acad. Sci. U.S.A. 85, 2444-2448
34. Gaboriaud, C., Bissery, V., Benchetrit, T. and Mornon, J. P. (1987) FEBS Lett. 224, 149-155
35. Lemesle-Varloot, L., Henrissat, B., Gaboriaud, C., Bissery, V., Morgat, A. and Mornon, J. P. (1990) Biochimie 72, 555-574
36. Silver, J. (1991) in PCR: A Practical Approach (McPherson, M. J., Quirke, P. and Taylor, G. R., eds.), pp. 137-146, IRL Press at Oxford University Press, Oxford
37. Harley, C. B. and Reynolds, R. P. (1987) Nucleic Acids Res. 15, 2343-2360
38. Rosenberg, M. and Court, D. (1979) Annu. Rev. Genet. 13, 319-353
39. Romeo, T. and Preston, J. F. (1986) Biochemistry 25, 8385-8391
40. Gilkes, N. R., Henrissat, B., Kilburn, D. G., Miller, R. C. and Warren, R. A. J. (1991) Microbiol. Rev. 55, 303-315
41. Dobson, C. M. (1995) Struct. Biol. 2, 513-517
42. Yoder, M. D., Lietzke, S. E. and Jurnak, F. (1993) Structure 1, 241-251
43. Pickersgill, R., Jenkins, J., Harris, G., Nasser, W. and Robert-Baudouy, J. (1994) Nature Struct Biol. 1, 717-723
44. Henrissat, B., Heffron, S. E, Yoder, M. D., Lietzke, S. E. and Jurnak, F. (1995) Plant Physiol. 107, 963-976