Interaction of pyridine nucleotide substrates with Escherichia coli dihydrodipicolinate reductase: Thermodynamic and structural analysis of binary complexes

Biochemistry

Volumn 35, Issue 41, 1996, Pages 13294-13302

  Reddy, Sreelatha G ^a   Scapin, Giovanna ^a   Blanchard, John S ^a  

^a ALBERT EINSTEIN COLLEGE OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DIPICOLINIC ACID; OXIDOREDUCTASE; PYRIDINE NUCLEOTIDE; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE;

ARTICLE; DISSOCIATION CONSTANT; ENTHALPY; ENTROPY; ENZYME BINDING; ENZYME KINETICS; ENZYME PHOSPHORYLATION; ENZYME SPECIFICITY; ENZYME STRUCTURE; ENZYME SUBSTRATE COMPLEX; ESCHERICHIA COLI; NONHUMAN; PRIORITY JOURNAL; THERMODYNAMICS;

AMINO ACID SEQUENCE; BINDING SITES; CRYSTALLOGRAPHY, X-RAY; DIHYDRODIPICOLINATE REDUCTASE; ESCHERICHIA COLI; KINETICS; MODELS, CHEMICAL; MOLECULAR STRUCTURE; NAD; NADP; NUCLEOTIDES; OXIDOREDUCTASES; OXIDOREDUCTASES ACTING ON CH-CH GROUP DONORS; PHOSPHORYLATION; PROTEIN CONFORMATION; SUBSTRATE SPECIFICITY; THERMODYNAMICS;

ESCHERICHIA COLI;

EID: 0029820832     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi9615809     Document Type: Article

References (31)

1. Adams, M. J., Ellis, G. H., Gover, S., Naylor, C. E., & Phillips, C. (1994) Structure 2, 651-668.
2. Baker, P. I., Britton, K. L., Rice, D. W., Rob, A., & Stillman, T. J. (1992a) J. Mol Biol. 228, 662-671.
3. Baker, P. J., Britton, K. L., Engel, P. C., Farrants, G. W., Lilley, K. S., Rice, D. W., & Slillman, T. J. (1992b) Proteins 12, 75-86.
4. Bradford, M. (1976) Anal. Biochem. 72, 248.
5. Breslauer, K. J., Remeta, D. P., Chou, W.-Y., Ferrante, R., Curry, J., Zaunczkowski, D., Snyder, J. G., & Marky, L. A. (1987) Proc. Natl. Acad. Sci. U.S.A. 84, 8922-8926.
6. Brummell, D. A., Sharma, V. P., Anand, N. N., Bilous, D., Dubuc, G., Michniewicz, J., MacKenzie, C. R., Sadowska, J., Sigurskjold, B. W., Sinnott, B., Young, N. M., Bundle, D. R., & Narang, S. A. (1993) Biochemistry 32, 1180-1187.
7. Brunger, A. T. (1992) X-PLOR version 3 manual: a system for crystallography and NMR., Yale University, New Haven, CT.
8. Brunger, A. T., Kuriyan, J., & Karplus, M. (1987) Science 235, 458-460.
9. Bystroff, C., Oatley, S. J., & Kraut, J. (1990) Biochemistry 29, 3263-3277.
10. Cirillo, J. D., Weisbrod, T. R., Banerjee, A., Bloom, B. R., & Jacobs, W. R., Jr. (1994) J. Bacteriol. 176, 4424-4429.
11. Collaborative Computational Project No. 4 (1994) The CCP4 suite: programs for protein crystallography, Acta Crystallogr. D50, 760-763.
12. DeMoss, R. D., Gunsalus, I. C., & Bard, R. C. (1953) J. Bacteriol. 66, 10-16.
13. Eftink, M., & Biltonen, R. (1980) in Biological Microcalorimetry (Beezer, A. E., Ed.) pp 343-412, Academic Press, New York.
14. Evans, S. V. (1993) J. Mol. Graphics 11, 134-138.
15. Fersht, A. (1985) in Enzyme Structure and Mechanism, pp 294-310, W. H. Freeman, New York.
16. Howard, A. J. (1986) A guide to data reduction for the Nicolet Imaging Proportional Counter: the XENGEN system, Protein Engineering Department, Genex Corp., Gaithersburg, MD.
17. Ito, W., Iba, Y., & Kurosawa, Y. (1993) J. Biol. Chem. 268, 16639-16647.
18. John, J., Crennel, S. J., Hough, D. W., Danson, M. J., & Taylor, G. L. (1994) Structure 2, 385-393.
19. Jones, T. A. (1985) Methods Enzymol. 115, 157-171.
20. Karplus, P. A., & Schulz, G. E. (1989) J. Mol. Biol. 210, 163-180.
21. Kelly, R. F., & O'Connell, M. P. (1993) Biochemistry 32, 6828-6835.
22. Lumry, R., & Rajender, S. (1970) Biopolymers 9, 1125-1227.
23. Male, K. B., & Storey, K. B. (1982) Int. J. Biochem. 14, 1083-1089.
24. Navaza, J. (1994) Acta Crystattogr. D50, 157-163.
25. Quigley, F., Brinkmann, H., Martin, W. F., & Cerff, R. (1989) J. Mol. Evol. 29, 412-421.
26. Reddy, S. G., Sacchettini, J. C., & Blanchard, J. S. (1995) Biochemistry 34, 3492-3501.
27. Scapin, G., Blanchard, J. S., & Sacchettini, J. C. (1995) Biochemistry 34, 3502-3512.
28. Scrutton, N. S., Berry, A., & Perham, R. N. (1990) Nature 343, 38-43.
29. Sem, D. S., & Kasper, C. B. (1993) Biochemistry 32, 11548-11558.
30. Tronrud, D. E., Ten Eyck, L. F., & Mathews, B. W. (1988) Acta Crystallogr., A43, 489-501.
31. Wiseman, T., Williston, S., Brandts, J. F., & Lin, L.-N. (1989) Anal. Biochem. 179, 131.