PCR ribotyping for characterizing Salmonella isolates of different serotypes

Journal of Clinical Microbiology

Volumn 34, Issue 10, 1996, Pages 2440-2443

  Lagatolla, Cristina ^a   Dolzani, Lucilla ^a   Tonin, Enrico ^b   Lavenia, Annamaria ^a   Di Michele, Mirco ^a   Tommasini, Tiziana ^c   Monti Bragadin, Carlo ^a  

^a UNIVERSITY OF TRIESTE   (Italy)

^b UNIVERSITY OF GENOA   (Italy)

^c UNIVERSITY HOSPITAL OF PADOVA   (Italy)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL RNA; RNA 16S; RNA 23S;

ARTICLE; BACTERIUM ISOLATION; ITALY; NONHUMAN; PHYLOGENY; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RIBOTYPING; SALMONELLA; SEROTYPE;

BACTERIA (MICROORGANISMS); ENTERITIDIS; SALMONELLA; SALMONELLA ENTERITIDIS; SALMONELLA TYPHIMURIUM; TYPHIMURIUM;

EID: 0029818724     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/jcm.34.10.2440-2443.1996     Document Type: Article

References (27)

1. Altwegg, M., F. W. Hickmann-Brenner, and J. J. Farmer III. 1989. Ribosomal RNA gene restriction patterns provide increased sensitivity for typing Salmonella typhi strains. J. Infect. Dis. 160:145-149.
2. Baquar, N., E. J. Threlfall, B. Rowe, and J. Stanley. 1993. Molecular subtyping within a single Salmonella typhimurium phage type, DT204c, with a PCR-generated probe for IS200. FEMS Microbiol. Lett. 112:217-222.
3. Baquar, N., E. J. Threlfall, B. Rowe, and J. Stanley. 1994. Phage type 193 of Salmonella typhimurium contains different chromosomal genotypes and multiple IS200 profiles. FEMS Microbiol. Lett. 115:291-296.
4. Beltran, P., J. M. Musser, R. Helmuth, J. J. Farmer III, W. M. Frerichs, I. K. Wachsmuth, K. Ferris, A. C. McWhorter, J. G. Wells, A. Cravioto, and R. K. Selander. 1988. Toward a population genetic analysis of Salmonella: genetic diversity and relationships among strains of serotypes S. choleraesuis, S. derby, S. dublin, S. enteritidis, S. heildelberg, S. infantis, S. newport, and S. typhimurium. Proc. Natl. Acad. Sci. USA 85:7753-7757.
5. Boyd, E. F., F.-S. Wang, P. Beltran, S. A. Plock, K. Nelson, and R. K. Selander. 1993. Salmonella reference collection B (SARB): strains of 37 serovars of subspecies I. J. Gen. Microbiol. 139:1125-1132.
6. Crosa, J. H., D. J. Brenner, W. H. Ewing, and S. Falkow. 1973. Molecular relationships among the salmonelleae. J. Bacteriol. 115:307-315.
7. 5-associated profiles of Salmonella and Shigella genomic DNA. Res. Microbiol. 144:17-24.
8. Dolzani, L., E. Tonin, C. Lagatolla, and C. Monti-Bragadin. 1994. Typing of Staphylococcus aureus by amplification of the 16S-23S rRNA intergenic spacer sequences. FEMS Microbiol. Lett. 119:167-174.
9. Dolzani, L., E. Tonin, C. Lagatolla, L. Prandin, and C. Monti-Bragadin. 1995. Identification of Acinetobacter isolates in the A. calcoaceticus-A. baumannii complex by restriction analysis of the 16S-23S rRNA intergenic spacer sequences. J. Clin. Microbiol. 33:1108-1113.
10. Esteban, E., K. Snipes, D. Hird, R. Kasten, and H. Kinde. 1993. Use of ribotyping for characterization of Salmonella serotypes. J. Clin. Microbiol. 31:233-237.
11. Ezquerra, E., A. Burnens, C. Jones, and J. Stanley. 1993. Genotypic typing and phylogenetic analysis of Salmonella paratyphi B and S. java with IS200. J. Gen. Microbiol. 139:2409-2414.
12. Gruner, E., G. Martinetti Lucchini, R. K. Hoop, and M. Altwegg. 1994. Molecular epidemiology of Salmonella enteritidis. Eur. J. Epidemiol. 10:85-89.
13. Jensen, M. A., J. A. Webster, and N. Straus. 1993. Rapid identification of bacteria on the basis of polymerase chain reaction-amplified ribosomal DNA spacer polymorphisms. Appl. Environ. Microbiol. 59:945-952.
14. Kostman, J. R., T. D. Edlind, J. J. LiPuma, and T. L. Stull. 1992. Molecular epidemiology of Pseudomonas cepacia determined by polymerase chain reaction ribotyping. J. Clin. Microbiol. 30:2084-2087.
15. Li, J., K. Nelson, A. C. McWhorter, T. S. Whittam, and R. K. Selander. 1994. Recombinational basis of serovar diversity in Salmonella enterica. Proc. Natl. Acad. Sci. USA 91:2552-2556.
16. Lindberg, A. A., and L. Le Minor. 1984. Serology of Salmonella. Methods Microbiol. 15:1-141.
17. Nastasi, A., and C. Mammina. 1995. Epidemiological evaluation by PCR ribotyping of sporadic and outbreak-associated strains of Salmonella enterica serotype typhimurium. Res. Microbiol. 146:99-106.
18. Nastasi, A., C. Mammina, and M. R. Villafrate. 1993. Epidemiology of Salmonella typhimurium: ribosomal DNA analysis of strains from human and animal sources. Epidemiol. Infect. 110:553-565.
19. Olsen, J. E., M. N. Skov, E. J. Threlfall, and D. J. Brown. 1994. Clonal lines of Salmonella enterica serotype enteritidis documented by IS200-, ribo-, pulsed-field-gel electrophoresis and RFLP typing. J. Med. Microbiol. 40:15-22.
20. Selander, R. K., P. Beltran, N. H. Smith, R. Helmuth, F. A. Rubin, D. J. Kopecko, K. Ferris, B. D. Tall, A. Cravioto, and J. M. Musser. 1990. Evolutionary genetic relationship of clones of Salmonella serovars that cause human typhoid and other enteric fevers. Infect. Immun. 58:2262-2275.
21. Stanley, J., and N. Baquar. 1994. Phylogenetics of Salmonella enteritidis. Int. J. Food Microbiol. 21:79-87.
22. Stanley, J., N. Baquar, and E. J. Threlfall. 1993. Genotypes and phylogenetic relationships of Salmonella typhimurium are defined by molecular fingerprinting of IS200 and 16S rm loci. J. Gen. Microbiol. 139:1133-1140.
23. Stanley, J., A. Burnens, N. Powell, N. Chowdry, and C. Jones. 1992. The insertion sequence IS200 fingerprints chromosomal genotypes and epidemiological relationships in Salmonella heildelberg. J. Gen. Microbiol. 138:2329-2336.
24. Stanley, J., N. Chowdry, N. Powell, and E. J. Threlfall. 1992. Chromosomal genotypes (evolutionary lines) of Salmonella berta. FEMS Microbiol. Lett. 95:247-252.
25. Stanley, J., C. S. Jones, and E. J. Threlfall. 1991. Evolutionary lines among Salmonella enteritidis phage types are identified by insertion sequence IS200 distribution. FEMS Microbiol. Lett. 82:83-90.
26. Threlfall, E. J., and J. A. Frost. 1990. The identification, typing and fingerprinting of Salmonella: laboratory aspects and epidemiological applications. J. Appl. Bacteriol. 68:5-16.
27. Threlfall, E. J., E. Torre, L. R. Ward, A. Davalos-Perez, B. Rowe, and I. Gibert. 1994. Insertion sequence IS200 fingerprinting of Salmonella typhi: an assessment of epidemiological applicability. Epidemiol. Infect. 112:253-261.