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Volumn 13, Issue 7, 1996, Pages 1032-1038

Higher ribosomal RNA substitution rates in bacillariophyceae and dasycladales than in Mollusca, Echinodermata, and Actinistia-Tetrapoda

Author keywords

Actinistia Tetrapoda; Bacillariophyceae; Dasycladales; divergence time; Echinodermata; evolutionary distance; molecular clock; Mollusca; small subunit ribosomal RNA; taxonomic nucleotide substitution rate; variable positions

Indexed keywords

RIBOSOME RNA;

EID: 0029814451     PISSN: 07374038     EISSN: None     Source Type: Journal    
DOI: 10.1093/oxfordjournals.molbev.a025653     Document Type: Article
Times cited : (12)

References (52)
  • 1
    • 0025287317 scopus 로고
    • Phylogeny of the major tetrapod groups: Morphological data and divergence dates
    • BENTON, M. J. 1990. Phylogeny of the major tetrapod groups: morphological data and divergence dates. J. Mol. Evol. 30: 409-424
    • (1990) J. Mol. Evol. , vol.30 , pp. 409-424
    • Benton, M.J.1
  • 3
    • 0001566085 scopus 로고
    • Algae containing chlorophylls a + c are paraphyletic: Molecular evolutionary analysis of the Chromophyta
    • BHATTACHARYA, D., L. MEDLIN, P. O. WAINRIGHT, E. ARIZTIA, C. BIBEAU, S. STICKEL, and M. SOGIN. 1992. Algae containing chlorophylls a + c are paraphyletic: molecular evolutionary analysis of the Chromophyta. Evolution 46:1801-1817.
    • (1992) Evolution , vol.46 , pp. 1801-1817
    • Bhattacharya, D.1    Medlin, L.2    Wainright, P.O.3    Ariztia, E.4    Bibeau, C.5    Stickel, S.6    Sogin, M.7
  • 4
    • 0022534918 scopus 로고
    • Rates of DNA sequence evolution differ between taxonomic groups
    • BRITTEN, R. J. 1986. Rates of DNA sequence evolution differ between taxonomic groups. Science 231:1393-1398.
    • (1986) Science , vol.231 , pp. 1393-1398
    • Britten, R.J.1
  • 6
    • 9444250194 scopus 로고
    • Evolutionary analysis of cytochrome b sequences in some perciformes: Evidence for a slower rate of evolution than in mammals
    • Wiley-Liss, New York
    • CLEGG, M. T., and S. J. O'BRIEN. 1990. Evolutionary analysis of cytochrome b sequences in some perciformes: evidence for a slower rate of evolution than in mammals. J. Mol. Evol. Wiley-Liss, New York.
    • (1990) J. Mol. Evol
    • Clegg, M.T.1    O'Brien, S.J.2
  • 7
    • 0001087283 scopus 로고
    • Founder effects and the rate of mitochondrial DNA evolution of Hawaiian Drosophila
    • DESALLE, R., and A. R. TEMPLETON. 1988. Founder effects and the rate of mitochondrial DNA evolution of Hawaiian Drosophila. Evolution 42:1076-1084.
    • (1988) Evolution , vol.42 , pp. 1076-1084
    • Desalle, R.1    Templeton, A.R.2
  • 8
    • 0025064035 scopus 로고
    • The pattern of mammalian evolution and the relative rate of molecular evolution
    • EASTEAL, S. 1990. The pattern of mammalian evolution and the relative rate of molecular evolution. Genetics 124:165-173.
    • (1990) Genetics , vol.124 , pp. 165-173
    • Easteal, S.1
  • 10
    • 0028790653 scopus 로고
    • Inferring phylogenies from sequences of unequal base compositions
    • GALTIER, N., and M. GOUY. 1995. Inferring phylogenies from sequences of unequal base compositions. Proc. Natl. Acad. Sci. USA 92:11317-11321.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 11317-11321
    • Galtier, N.1    Gouy, M.2
  • 11
    • 0028346545 scopus 로고
    • Reading the molecular clock from the decay of internal symmetry of a gene
    • GIBBS, P., and A. DUGAICZYK. 1994. Reading the molecular clock from the decay of internal symmetry of a gene. Proc. Natl Acad. Sci. USA 91:3413-3417.
    • (1994) Proc. Natl Acad. Sci. USA , vol.91 , pp. 3413-3417
    • Gibbs, P.1    Dugaiczyk, A.2
  • 12
    • 0008114066 scopus 로고
    • Rates of molecular evolution
    • GILLESPIE, J. H. 1986. Rates of molecular evolution. Ann. Rev. Ecol. Syst. 17:637-665.
    • (1986) Ann. Rev. Ecol. Syst. , vol.17 , pp. 637-665
    • Gillespie, J.H.1
  • 14
    • 0025678383 scopus 로고
    • Molecular clock of viral evolution, and the neutral theory
    • GOJOBORI, T., E. N. MORIYAMA, and M. KIMURA. 1990. Molecular clock of viral evolution, and the neutral theory. Proc. Natl. Acad. Sci. USA 87:10015-10018.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 10015-10018
    • Gojobori, T.1    Moriyama, E.N.2    Kimura, M.3
  • 15
    • 0028071557 scopus 로고
    • Collection of small subunit 16S- and 16S-like ribosomal RNA structures: 1994
    • GUTELL, R. R. 1994. Collection of small subunit 16S- and 16S-like ribosomal RNA structures: 1994. Nucleic Acids Res. 22:3502-3507.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 3502-3507
    • Gutell, R.R.1
  • 16
    • 0022376704 scopus 로고
    • Dating of the human - Ape splitting by a molecular clock of mitochondrial DNA
    • HASEGAWA, M., H. KISHINO, and T. YANO. 1985. Dating of the human - ape splitting by a molecular clock of mitochondrial DNA. J. Mol. Evol. 22:160-174.
    • (1985) J. Mol. Evol. , vol.22 , pp. 160-174
    • Hasegawa, M.1    Kishino, H.2    Yano, T.3
  • 17
    • 0025133472 scopus 로고
    • Tetrapod phylogeny inferred from 18S and 28S ribosomal RNA sequences and a review of the evidence for amniote relationships
    • HEDGES, S. B., K. D. MOBERG, and L. MAXSON. 1990. Tetrapod phylogeny inferred from 18S and 28S ribosomal RNA sequences and a review of the evidence for amniote relationships. Mol. Biol. Evol. 7:607-633.
    • (1990) Mol. Biol. Evol. , vol.7 , pp. 607-633
    • Hedges, S.B.1    Moberg, K.D.2    Maxson, L.3
  • 18
    • 0024598146 scopus 로고
    • Fast and sensitive multiple sequence alignments on a microcomputer
    • HIGGINS, D. G., and P. M. SHARP. 1989. Fast and sensitive multiple sequence alignments on a microcomputer. Cabios 5:151-153.
    • (1989) Cabios , vol.5 , pp. 151-153
    • Higgins, D.G.1    Sharp, P.M.2
  • 19
    • 0026605537 scopus 로고
    • CLUSTAL V: Improved software for multiple sequence alignment
    • HIGGINS, D. G., A. J. BLEASBY, and R. FUCHS. 1992. CLUSTAL V: improved software for multiple sequence alignment. Cabios 8:189-191.
    • (1992) Cabios , vol.8 , pp. 189-191
    • Higgins, D.G.1    Bleasby, A.J.2    Fuchs, R.3
  • 20
    • 0023413051 scopus 로고
    • Origin and evolution of organisms as deduced from 5S ribosomal RNA sequences
    • HORI, H., and S. OSAWA. 1987. Origin and evolution of organisms as deduced from 5S ribosomal RNA sequences. Mol. Biol. Evol. 4:445-472.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 445-472
    • Hori, H.1    Osawa, S.2
  • 21
    • 3042881557 scopus 로고
    • Diatom biostratigraphy on the generic level
    • JOUSE, A. P. 1978. Diatom biostratigraphy on the generic level. Micropaleontology 3:316-26.
    • (1978) Micropaleontology , vol.3 , pp. 316-326
    • Jouse, A.P.1
  • 22
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences
    • KIMURA, M. 1980. A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120.
    • (1980) J. Mol. Evol. , vol.16 , pp. 111-120
    • Kimura, M.1
  • 23
    • 0016087667 scopus 로고
    • On some principles governing molecular evolution
    • KIMURA, M., and T. OHTA. 1974. On some principles governing molecular evolution. Proc. Natl. Acad. Sci. USA 71: 2848-2852.
    • (1974) Proc. Natl. Acad. Sci. USA , vol.71 , pp. 2848-2852
    • Kimura, M.1    Ohta, T.2
  • 24
    • 0016155942 scopus 로고
    • An examination of the constancy of the rate of molecular evolution
    • LANGLEY, C. H., and W. M. FITCH. 1974. An examination of the constancy of the rate of molecular evolution. J. Mol. Evol. 3:166-177.
    • (1974) J. Mol. Evol. , vol.3 , pp. 166-177
    • Langley, C.H.1    Fitch, W.M.2
  • 26
    • 0023074036 scopus 로고
    • An evaluation of the molecular clock hypothesis using mammalian DNA sequences
    • LI, W.-H., M. TANIMURA, and P. M. SHARP. 1987. An evaluation of the molecular clock hypothesis using mammalian DNA sequences. J. Mol. Evol. 25:330-342.
    • (1987) J. Mol. Evol. , vol.25 , pp. 330-342
    • Li, W.-H.1    Tanimura, M.2    Sharp, P.M.3
  • 27
    • 0001911916 scopus 로고
    • Phylogeny of early vertebrate skeletal induction and ossification patterns
    • M. K. HECHT, B. WALLACE, and G. T. PRANCE, eds. Plenum Press, New York
    • MAISEY, J. G. 1988. Phylogeny of early vertebrate skeletal induction and ossification patterns. Pp. 1-30 in M. K. HECHT, B. WALLACE, and G. T. PRANCE, eds. Evolutionary biology. Vol. 22. Plenum Press, New York.
    • (1988) Evolutionary Biology , vol.22 , pp. 1-30
    • Maisey, J.G.1
  • 29
    • 0023514080 scopus 로고
    • Evolution in bacteria: Evidence for a universal substitution rate in cellular genome
    • OCHMAN, H., and A. C. WILSON. 1987. Evolution in bacteria: evidence for a universal substitution rate in cellular genome. J. Mol. Evol. 26:74-86.
    • (1987) J. Mol. Evol. , vol.26 , pp. 74-86
    • Ochman, H.1    Wilson, A.C.2
  • 30
    • 0026497467 scopus 로고
    • The molecular clock ticks regularly in muroid rodents and hamsters
    • O'HUIGIN, C., and W.-H. LI. 1992. The molecular clock ticks regularly in muroid rodents and hamsters. J. Mol. Evol. 35: 377-384.
    • (1992) J. Mol. Evol. , vol.35 , pp. 377-384
    • O'Huigin, C.1    Li, W.-H.2
  • 31
    • 0027948803 scopus 로고
    • 18s rDNA and evolution in the Dasycladales (Chlorophyta): Modern living fossils
    • OLSEN, J. L., W. T. STAM, S. BERGER, and D. MENZEL. 1994. 18s rDNA and evolution in the Dasycladales (Chlorophyta): modern living fossils. J. Phycol. 30:729-744.
    • (1994) J. Phycol. , vol.30 , pp. 729-744
    • Olsen, J.L.1    Stam, W.T.2    Berger, S.3    Menzel, D.4
  • 32
    • 0024359678 scopus 로고
    • Rate of molecular evolution and the fraction of nucleotide positions free to vary
    • PALUMBI, S. R. 1989. Rate of molecular evolution and the fraction of nucleotide positions free to vary. J. Mol. Evol. 29: 180-187.
    • (1989) J. Mol. Evol. , vol.29 , pp. 180-187
    • Palumbi, S.R.1
  • 33
    • 0027533924 scopus 로고
    • Evolution of the Zfx and Zfy senes: Rates and interdependence between the genes
    • PAMILO, P., and N. BIANCHI. 1993. Evolution of the Zfx and Zfy senes: rates and interdependence between the genes. Mol. Biol. Evol. 10:271-281.
    • (1993) Mol. Biol. Evol. , vol.10 , pp. 271-281
    • Pamilo, P.1    Bianchi, N.2
  • 34
    • 0028578194 scopus 로고
    • Can the Cambrian explosion be inferred through molecular phylogeny
    • PHILIPPE, H., A. CHENUIL, and A. ADOUTTE. 1994. Can the Cambrian explosion be inferred through molecular phylogeny. Development Suppl. 15-25.
    • (1994) Development Suppl. , pp. 15-25
    • Philippe, H.1    Chenuil, A.2    Adoutte, A.3
  • 35
    • 0028176239 scopus 로고
    • Comparison of molecular and paleontological data in diatoms suggests a major gap in the fossil record
    • PHILIPPE, H., U. SORHANNUS, A. BAROIN, R. PERASSO, F. GASSE, and A. ADOUTTE. 1994. Comparison of molecular and paleontological data in diatoms suggests a major gap in the fossil record. J. Evol. Biol. 7:247-265.
    • (1994) J. Evol. Biol. , vol.7 , pp. 247-265
    • Philippe, H.1    Sorhannus, U.2    Baroin, A.3    Perasso, R.4    Gasse, F.5    Adoutte, A.6
  • 36
    • 0023892431 scopus 로고
    • Revised primary structure of rabbit 18S ribosomal RNA
    • RAIRKAR, A., H. M. RUBINO, and R. E. LOCKARD. 1988. Revised primary structure of rabbit 18S ribosomal RNA. Nucleic Acid Res. 16:3113.
    • (1988) Nucleic Acid Res. , vol.16 , pp. 3113
    • Rairkar, A.1    Rubino, H.M.2    Lockard, R.E.3
  • 37
    • 0021771644 scopus 로고
    • Complete nucleotide sequence of mouse 18S rRNA gene: Comparison with other available homoloss
    • RAYNAL, F., B. MICHOT, and J. P. BACHELLERIE. 1984. Complete nucleotide sequence of mouse 18S rRNA gene: comparison with other available homoloss. FEBS Lett. 167: 263-268.
    • (1984) FEBS Lett. , vol.167 , pp. 263-268
    • Raynal, F.1    Michot, B.2    Bachellerie, J.P.3
  • 38
    • 0001449659 scopus 로고
    • Molluscan phylogeny: The paleontological viewpoint
    • RUNNEGAR, B., and J. POJETA. 1974. Molluscan phylogeny: the paleontological viewpoint. Science 186:311-317.
    • (1974) Science , vol.186 , pp. 311-317
    • Runnegar, B.1    Pojeta, J.2
  • 39
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • SAITOU, N., and M. NEI. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 40
    • 0002320687 scopus 로고
    • The protein molecular clock: Time for a reevaluation
    • M. K. HECHT, B. WALLACE, and R. J. MACINTYRE, eds. Plenum Press, New York
    • SCHERER, S. 1990. The protein molecular clock: time for a reevaluation. Pp. 83-106 in M. K. HECHT, B. WALLACE, and R. J. MACINTYRE, eds. Evolutionary biology. Vol. 24. Plenum Press, New York.
    • (1990) Evolutionary Biology , vol.24 , pp. 83-106
    • Scherer, S.1
  • 41
    • 0025811609 scopus 로고
    • Uniformity in the nonsynonymous substitution rates of embryonic B-globin genes of several vertebrate species
    • SHAPIRO, S. G. 1991. Uniformity in the nonsynonymous substitution rates of embryonic B-globin genes of several vertebrate species. J. Mol. Evol. 32:122-127.
    • (1991) J. Mol. Evol. , vol.32 , pp. 122-127
    • Shapiro, S.G.1
  • 42
    • 0024591558 scopus 로고
    • On the rate of DNA sequence evolution in Drosophila
    • SHARP, P., and W.-H. LI. 1989. On the rate of DNA sequence evolution in Drosophila. J. Mol. Evol. 28:398-402.
    • (1989) J. Mol. Evol. , vol.28 , pp. 398-402
    • Sharp, P.1    Li, W.-H.2
  • 43
    • 0002821474 scopus 로고
    • The diatom system: Ideas on phylogeny
    • SIMONSEN, R. 1979. The diatom system: ideas on phylogeny. Bacillaria 2:9-71.
    • (1979) Bacillaria , vol.2 , pp. 9-71
    • Simonsen, R.1
  • 44
    • 0001917921 scopus 로고
    • Fossil evidence for the relationship of extant echinoderm classes and their times of divergence
    • C. PAUL and A. B. SMITH, eds. Clarendon Press, Oxford
    • SMITH, A. B. 1988. Fossil evidence for the relationship of extant echinoderm classes and their times of divergence. Pp. 85-97 in C. PAUL and A. B. SMITH, eds. Echinoderm phylogeny and evolutionary biology. Clarendon Press, Oxford.
    • (1988) Echinoderm Phylogeny and Evolutionary Biology , pp. 85-97
    • Smith, A.B.1
  • 45
    • 0022529386 scopus 로고
    • Primary structure of the Paramecium tetraurelia small-subunit rRNA coding region: Phylogenetic relationships within the Ciliophora
    • SOGIN, M. L., and H. J. ELWOOD. 1986. Primary structure of the Paramecium tetraurelia small-subunit rRNA coding region: phylogenetic relationships within the Ciliophora. J. Mol. Evol. 23:53-60.
    • (1986) J. Mol. Evol. , vol.23 , pp. 53-60
    • Sogin, M.L.1    Elwood, H.J.2
  • 46
    • 0027836910 scopus 로고
    • Relative-rate tests versus paleontological divergence data for diatoms and vertebrates
    • SORHANNUS, U. 1994. Relative-rate tests versus paleontological divergence data for diatoms and vertebrates. Acta Palaeontol. Polon. 38:199-214
    • (1994) Acta Palaeontol. Polon. , vol.38 , pp. 199-214
    • Sorhannus, U.1
  • 47
    • 0003247893 scopus 로고
    • Phylogenetic implications of the 18S ribosomal RNA sequence of the coelacanth Latimeria chalumnae (Smith)
    • STOCK, D. W., K. D. MOBERG, G. S. WHITT, and L. R. MAXSON. 1991. Phylogenetic implications of the 18S ribosomal RNA sequence of the coelacanth Latimeria chalumnae (Smith). Environ. Biol. Fishes 32:99-118.
    • (1991) Environ. Biol. Fishes , vol.32 , pp. 99-118
    • Stock, D.W.1    Moberg, K.D.2    Whitt, G.S.3    Maxson, L.R.4
  • 49
    • 0028147502 scopus 로고
    • Phylogenetic relationships among extant classes of echinoderms, as inferred from sequences of 18S rDNA. coincide with relationships deduced from the fossil record
    • WADA, H., and N. SATOH. 1994. Phylogenetic relationships among extant classes of echinoderms, as inferred from sequences of 18S rDNA. coincide with relationships deduced from the fossil record. J. Mol. Evol. 38:41-49.
    • (1994) J. Mol. Evol. , vol.38 , pp. 41-49
    • Wada, H.1    Satoh, N.2
  • 51
    • 0000378875 scopus 로고
    • Evidence for higher rates of nucleotide substitution in rodents than in man
    • WU, C. I., and W-H. LI. 1985. Evidence for higher rates of nucleotide substitution in rodents than in man. Proc. Natl. Acad. Sci. USA 82:1741-1745.
    • (1985) Proc. Natl. Acad. Sci. USA , vol.82 , pp. 1741-1745
    • Wu, C.I.1    Li, W.-H.2
  • 52
    • 0001895697 scopus 로고
    • Evolutionary divergence and convergence in proteins
    • V. BRYSON and H. VOGEL, eds. Academic Press, New York
    • ZUCKERKANDL, E., and L. PAULING. 1965. Evolutionary divergence and convergence in proteins. Pp. 97-166 in V. BRYSON and H. VOGEL, eds. Evolving genes and proteins. Academic Press, New York.
    • (1965) Evolving Genes and Proteins , pp. 97-166
    • Zuckerkandl, E.1    Pauling, L.2


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