Kinetic study on the formation of a de novo designed heterodimeric coiled-coil: Use of surface plasmon resonance to monitor the association and dissociation of polypeptide chains

Biochemistry

Volumn 35, Issue 37, 1996, Pages 12175-12185

  Chao, Heman ^a   Houston Jr , Michael E ^a   Grothe, Suzanne ^b   Kay, Cyril M ^a   O'Connor McCourt, Maureen ^a,b   Irvin, Randall T ^a   Hodges, Robert S ^a  

^a UNIVERSITY OF ALBERTA   (Canada)

^b NATIONAL RESEARCH COUNCIL CANADA   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ANTIGEN ANTIBODY REACTION; ARTICLE; BIOSENSOR; CARBOXY TERMINAL SEQUENCE; DIMERIZATION; DISSOCIATION CONSTANT; ENZYME KINETICS; HYDROPHOBICITY; MOLECULAR INTERACTION; NONHUMAN; PEPTIDE SYNTHESIS; PRIORITY JOURNAL; PROTEIN STRUCTURE;

AMINO ACID SEQUENCE; CIRCULAR DICHROISM; DIMERIZATION; ELECTROCHEMISTRY; KINETICS; LEAST-SQUARES ANALYSIS; OLIGOPEPTIDES; PROTEIN STRUCTURE, SECONDARY; SOFTWARE; SPECTRUM ANALYSIS; STRUCTURE-ACTIVITY RELATIONSHIP; ULTRACENTRIFUGATION;

EID: 0029812117     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi9530604     Document Type: Article

References (76)

1. Adamson, J. G., Zhou, N. E., & Hodges, R. S. (1993) Curr. Opin. Biotechnol. 4, 428-437.
2. Bartley, T. D., Hunt, R. W., Welcher, A. A., Boyle, W. J., Parker, V. P., Lindberg, R. A., Lu, H. S., Colombero, A. M., Elliott, R. L., Guthrie, B. A., Holst, P. L., Skrine, J. D., Toso, R. J., Zhang, M., Fernandaz, E., Trail, G., Varnum, B., Yarden, Y., Hunter, T., & Fox, G. M. (1994) Nature 368, 558-560.
3. Bayer, E. A., Zalis, M. G., & Wilchek, M. (1985) Anal. Biochem. 149, 529-539.
4. Baxevanis, A. D., & Vinson, C. (1993) Curr. Opin. Genet. Dev. 3, 278-285.
5. Betz, S., Fairman, R., O'Neil, K., Lear, J., & DeGrado, W. (1995) Phil. Trans. R. Soc. London B: Biol. Sci. 348, 81-88.
6. Bondeson, K., Frotsell-Karlsson, A., Fägerstam, L., & Magnusson, G. (1993) Anal. Biochem. 214, 245-251.
7. Chang, H. C., Bao, Z., Yao, Y., Tse, A. G., Goyarts, E. C., Madsen. M., Kawasaki, E., Brauer, P. P., Sacchettini, J. C., Nathenson, S. G., & Reinherz, E. L. (1994) Proc. Natl. Acad. Sci. U.S.A. 91, 11408-11412.
8. Cohen, C., & Parry, D. (1990) Proteins 7, 1-15.
9. Cohn, E. J., & Edsall, J. T. (1943) in Proteins, Amino Acids and Peptides as Ions and Dipolar Ions, pp 370-381, Reinhold, New York.
10. Crick, F. H. C. (1953) Acta Crystallogr, 6, 689-697.
11. Ellenberger, T. E., Brandle, C. J., Struhl, K., & Harrision, S. C. (1992) Cell 71, 1223-1237.
12. Fairman, R., Chao, H.-G., Mueller, L., Lavoie, T. B., Shen, L., Novotny, J., & Matsueda, G. R. (1995) Protein Sci. 4, 1457-1467.
13. Francis, M. K., Phinney, D. G., & Ryder, K. (1995) J. Biol. Chem. 270, 11502-11513.
14. Fisher, R. J., Fivash, M., Casas-Finet, J., Erickson, J. W., Kondoh, A., Bladen, S. V., Fisher, C., Watson, D. K., & Papas, T. (1994) Protein Sci. 3, 257-266.
15. Glover, J. N. M., & Harrison, S. C. (1995) Nature 373, 257-261.
16. Graddis, T. J., Myszka, D. G., & Chaiken, I. M. (1993) Biochemistry 32, 12664-12671.
17. Granger-Schnarr, M., Benusiglio, E., Schnarr, M., & Sassone-Corsi, P. (1992) Proc. Natl. Acad. Sci. U.S.A. 89, 4236-4239.
18. Green, L. C., Kortt, A. A., & Nice, E. (1993) Eur. J. Biochem. 217, 319-325.
19. Green, N. M. (1963) Biochem. J. 89, 585-591.
20. Harbury, P. B., Zhang, T., Kim, P. S., & Alber, T. (1993) Science 262, 1401-1407.
21. Harbury, P. B., Kim, P. S., & Alber T. (1994) Nature 371, 80-83.
22. Hodges, R. S. (1992) Curr. Biol. 2, 122-124.
23. Hodges, R. S. (1996) Biochem. Cell Biol. 74, 133-154.
24. Hodges, R. S., Sodek, J., Smillie, L. B., & Jurasek, L. (1972) Cold Spring Harbor Symp. Quant. Biol. 37, 299-310.
25. Hodges, R. S., Saund, A. K., Chong, P. C. S., St. Pierre, S. A., & Reid, R. E. (1981) J. Biol. Chem. 256, 1214-1224.
26. Hodges, R. S., Semchuk, P. D., Taneja, A. K., Kay, C. M., Parker, J. M. R., & Mant, C. T. (1988) Pept. Res. 1, 19-30.
27. Hodges, R. S., Zhou, N. E., Kay, C. M., & Semchuk, P. D. (1990) Pept. Res. 3, 123-137.
28. Hu, J. C., O'Shea, E. K., Kim, P. S., & Sauer, R. T. (1990) Science 250, 1400-1402.
29. Hurst, H. C. (1994) Protein Profile 1, 123-168.
30. Johnnsson, B., Löfas, S., & Lindquist, G. (1991) Anal. Biochem. 198, 268-277.
31. Johnson, M. L., Correia, J. J., Yphantis, D. A., & Halvorson, H. R. (1981) Biophys. J. 36, 575-588.
32. Jönsson, U., Fagerstam, L., Ivarsson, B., Johnsson, B., Karlsson, R., Lundh, K., Löfas, S., Persson, B., Roos, H., Rönnberg, I., Sjölander, S., Stenberg, E., Ståhlberg, R., Urabaniczky, C., Östlin, H., & Malmqvist, M. (1991) BioTechniques 11, 620-627.
33. Karlsson, R., Michaelsson, A., & Mattsson, L. (1991) J. Immunol. Methods 145, 229-240.
34. Kohn, W. D., Kay, C. M., & Hodges, R. S. (1995) Protein Sci. 4, 237-250.
35. König, P., & Richmond, T. J. (1993) J. Mol. Biol. 233, 139- 154.
36. Krylov, D., Mikhailenko, I., & Vinson, C. (1994) EMBO J. 13, 2849-2861.
37. Lau, S. Y. M., Taneja, A K., & Hodges, R. S. (1984) J. Biol. Chem. 259, 13253-13261.
38. Lavigne, P., Sönnichsen, F. D., Kay, C. M., & Hodges, R. S. (1996) Science 271, 1136-1138.
39. Lebowitz, J., Kar, S., Braswell, E., McPherson, S., & Richard, D. (1994) Protein Sci. 3, 1374-1382.
40. Lonberg, N., Taylor, L. D., Harding, F. A., Trounstine, M., Higgins, K. M., Schramm, S. R., Kuo, C.-C., Mashayekh, R., Wymore, K., McCabe, J. G., Munoz-O'Regan, D., O'Donnell, S. L., Lapachet, E. S. G., Bengoechea, T., Fishwild, D. M., Carmack, C. E., Kay, R. M., & Huszar, D. (1994) Nature 368, 856-859.
41. Lovejoy, B., Choe, S., Cascio, A., McRorie, D. K., DeGrado, W. F., & Eisenberg, D. (1993) Science 259, 1288-1293.
42. Lumb, K. J., & Kim, P. S. (1995a) Biochemistry 34, 8642-8648.
43. Lumb, K. J., & Kim, P. S. (1995b) Science 268, 436-439.
44. McLachlan, A. D., & Stewart, M. (1975) J. Mol. Biol. 98, 293-304.
45. Milla, M. E., Brown, B. M., & Sauer, R. T. (1993) Protein Sci. 2, 2198-2205.
46. Mo, J., Holtzer, M., & Holtzer, A. (1991) Proc. Nalt. Acad. Sci. U.S.A. 88, 916-920.
47. Monera, O. D., Kay, C. M., & Hodges, R. S. (1993) J. Biol. Chem. 268, 19218-19227.
48. Monera, O. D., Kay, C. M., & Hodges, R. S. (1994) Biochemistry 33, 3862-3871.
49. O'Shannessy, D. J., Brighum-Burke, M., Soneson, K., Hensley, P., & Brooks, I. (1993) Analyt. Biochem. 212, 457-468
50. O'Shea, E. K., Keenan, J. D., Kim, P. S., & Alber, T. (1991) Science 254, 539-544.
51. O'Shea, E. K., Rutkowski, R., & Kim, P. S. (1992) Cell 68, 699-708.
52. O'Shea, E. K., Lumb, K. J., & Kim, P. S. (1993) Curr. Biol. 3, 658-667
53. Ottemann, K. M., & Mekalanos, J. J. (1995) Mol. Microbiol. 15, 719-731.
54. Pack, P., & Pluckthun, A. (1992) Biochemistry 31, 1579-1584.
55. Pack, P., Muller, K., Zahn, P., & Pluckthun, A. (1995) J. Mol. Biol. 246, 28-34.
56. Patel, L. R., Curran, T., & Kerppol, T. K. (1994) Proc. Natl. Acad. Sci. U.S.A. 91, 7360-7364.
57. Pernelle, C., Clerc, F. F., Dureuil, C., Bracco, L., & Tocque, B. (1993) Biochemistry 32, 11682-11687.
58. Schmidt-Dorr, T., Oertel-Buchheit, P., Pernelle, C., Bracco, L., Schnarr, M., & Granger-Schnarr, M. (1991) Biochemistry 30, 9657-9664.
59. Schuermann, M., Hunter, J. B., Henning, G., & Müller, R. (1991) Nucleic Acids Res. 19, 739-746.
60. Seth, A., & Stern, L. J. (1994) Nature 369, 324-327.
61. Sodek, J., Hodges, R. S., Smillie, L. B., & Jurasek, L. (1972) Proc. Natl. Acad. Sci. U.S.A. 69, 3800-3804.
62. Sollerbrant, K., Akusjarvi, G., Linder, S., & Svensson, C. (1995) Nucleic Acids Res. 23, 588-594.
63. Stone, D., Sodek, J., Johnson, P., & Smillie, L. B. (1975) in Proceedings of the IX Federation of European Biochemical Societies Meeting. Protein of Contractile Systems (Bir, E. N. A., Ed.) Vol. 31. pp 125-136, North Holland Publishing Co., Amsterdam.
64. Taylor, N., Flemington, E., Kolman, J. K., Baumann, R. P., Speck, S. H., & Miller, G. (1991) J. Virol. 65, 4033-4041.
65. Ward, L. D., Howlett, G. J., Hammacher, A., Weinstock, J., Yasukawa, K., Simpson, R. J., & Winsor, D. J. (1995) Biochemistry 34, 2901-2907.
66. Wendt, H., Bayer, C., Baici, A., Thomas, R. M., & Bosshard, H. R. (1995) Biochemistry 34, 4097-4107.
67. Wishart, D. S., Boyko, R. F., Willard, L., Richards, F. M., & Sykes, B. (1994) Comp. Appl. Biosci. 10, 121-132.
68. Wu, Z., Eaton, S. F., Laue, T. M., Johnson, K. W., Sana, T. R., & Ciardelli, T. L. (1994) Protein Eng. 7, 1137-1144.
69. Wu, Z., Johnson, K. W., Goldslein, B., Choi, Y., Eaton, S. F., Laue, T. M., & Ciardelli, T. L. (1995) J. Biol. Chem. 270, 16039-16044.
70. Zhou, N. E., Kay, C. M., & Hodges, R. S. (1992a) Biochemistry 31, 5739-5746.
71. Zhou, N. E., Kay, C. M., & Hodges, R. S. (1992b) J. Biol. Chem. 267, 2664-2670.
72. Zhou, N. E., Kay, C. M., & Hodges, R. S. (1994a) Protein Eng. 7, 1365-1372.
73. Zhou, N. E., Kay, C. M., & Hodges, R. S. (1994b) J. Mol. Biol. 237, 500-512.
74. Zhu, B.-Y., Zhou, N. E., Semchuk, P. D., Kay, C. M., & Hodges. R. S. (1992) Int. J. Pept. Protein Res. 40, 171-179.
75. Zhu, B.-Y., Zhou, N. E., Kay, C. M., & Hodges, R. S. (1993) Protein Sci. 2, 383-394.
76. Zilzewitz, J. A., Bilsel, O., Luo, J., Jones, B. E., & Matthews, C. R. (1995) Biochemistry 34, 12812-12819.