메뉴 건너뛰기




Volumn 15, Issue 17, 1996, Pages 4740-4748

Downstream box-anti-downstream box interactions are dispensable for translation initiation of leaderless mRNAs

Author keywords

Downstream box; Leaderless mRNAs; Translation initiation

Indexed keywords

MESSENGER RNA; PRIMER RNA; RNA 16S;

EID: 0029811326     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1002/j.1460-2075.1996.tb00851.x     Document Type: Article
Times cited : (55)

References (50)
  • 1
    • 0020505178 scopus 로고
    • Tn1721 encoded tetracycline resistance: Mapping of structural and regulatory genes mediating resistance
    • Altenbuchner, J., Schmid, K. and Schmid, R. (1983) Tn1721 encoded tetracycline resistance: mapping of structural and regulatory genes mediating resistance. J. Bacteriol., 153, 116-123.
    • (1983) J. Bacteriol. , vol.153 , pp. 116-123
    • Altenbuchner, J.1    Schmid, K.2    Schmid, R.3
  • 2
    • 0026569497 scopus 로고
    • Unusual ribosome binding properties of mRNA encoding lambda cl repressor
    • Balakin, A.G., Skripkin, E.A., Shatsky, I.N. and Bogdanov, A.A. (1992) Unusual ribosome binding properties of mRNA encoding lambda cl repressor. Nucleic Acids Res., 20, 563-571.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 563-571
    • Balakin, A.G.1    Skripkin, E.A.2    Shatsky, I.N.3    Bogdanov, A.A.4
  • 3
    • 0028912031 scopus 로고
    • Cloning and primary sequence of the rpoH gene from Pseudomonas aeruginosa
    • Benevenisti, L., Koby, S., Rutman, A., Giladi, H., Yura, T. and Oppenheim, A.B. (1995) Cloning and primary sequence of the rpoH gene from Pseudomonas aeruginosa. Gene, 155, 73-76.
    • (1995) Gene , vol.155 , pp. 73-76
    • Benevenisti, L.1    Koby, S.2    Rutman, A.3    Giladi, H.4    Yura, T.5    Oppenheim, A.B.6
  • 4
    • 0024422744 scopus 로고
    • Dual translational start sites control function of the lambda S gene
    • Bläsi, U., Nam, K., Hartz, D., Gold, L. and Young, R. (1989) Dual translational start sites control function of the lambda S gene. EMBO J., 8, 3501-3510.
    • (1989) EMBO J. , vol.8 , pp. 3501-3510
    • Bläsi, U.1    Nam, K.2    Hartz, D.3    Gold, L.4    Young, R.5
  • 5
    • 0025348395 scopus 로고
    • Suppression of the negative effect of minor arginine codons on gene expression; preferential usage of minor codons within the first 25 codons of the Escherichia coli genes
    • Chen, G.-F.T. and Inouye, M. (1990) Suppression of the negative effect of minor arginine codons on gene expression; preferential usage of minor codons within the first 25 codons of the Escherichia coli genes. Nucleic Acids Res., 18, 1465-1473.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 1465-1473
    • Chen, G.-F.T.1    Inouye, M.2
  • 6
    • 0022419146 scopus 로고
    • Bacteriophage P2 late promoters. II. Comparison of the four late promoter sequences
    • Christie, G.E. and Calendar, R. (1985) Bacteriophage P2 late promoters. II. Comparison of the four late promoter sequences. J. Mol. Biol., 181, 373-382.
    • (1985) J. Mol. Biol. , vol.181 , pp. 373-382
    • Christie, G.E.1    Calendar, R.2
  • 7
    • 0025166089 scopus 로고
    • Secondary structure of the ribosome binding site determines translational efficiency: A quantitative analysis
    • deSmit, M. and van Duin, J. (1990) Secondary structure of the ribosome binding site determines translational efficiency: a quantitative analysis. Proc. Natl Acad. Sci. USA, 87, 7668-7672.
    • (1990) Proc. Natl Acad. Sci. USA , vol.87 , pp. 7668-7672
    • DeSmit, M.1    Van Duin, J.2
  • 8
    • 0024210037 scopus 로고
    • What constitutes the signal for the initiation of protein synthesis on Escherichia coli mRNAs?
    • Dreyfus, M. (1988) What constitutes the signal for the initiation of protein synthesis on Escherichia coli mRNAs? J. Mol. Biol., 204, 79-94.
    • (1988) J. Mol. Biol. , vol.204 , pp. 79-94
    • Dreyfus, M.1
  • 9
    • 0025952258 scopus 로고
    • Codon choice and potential complementarity between mRNA downstream of the initiation codon and bases 1471-1480 in 16S ribosomal RNA affects expression of glns
    • Faxen, M., Plumbridge, J. and Isaksson, L.A. (1991) Codon choice and potential complementarity between mRNA downstream of the initiation codon and bases 1471-1480 in 16S ribosomal RNA affects expression of glns. Nucleic Acids Res., 19, 5247-5251.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 5247-5251
    • Faxen, M.1    Plumbridge, J.2    Isaksson, L.A.3
  • 10
    • 0013892978 scopus 로고
    • Isolation and characterization of ribonuclease I mutants of Escherichia coli
    • Gesteland, R.F. (1966) Isolation and characterization of ribonuclease I mutants of Escherichia coli. J. Mol. Biol., 16, 67-84.
    • (1966) J. Mol. Biol. , vol.16 , pp. 67-84
    • Gesteland, R.F.1
  • 11
    • 0028907431 scopus 로고
    • Consecutive low-usage leucine codons block translation only when near the 5′ end of a message in Escherichia coli
    • Goldman, E., Rosenberg, A.H., Zubay, G. and Studier, F.W. (1995) Consecutive low-usage leucine codons block translation only when near the 5′ end of a message in Escherichia coli. J. Mol. Biol., 245, 467-473.
    • (1995) J. Mol. Biol. , vol.245 , pp. 467-473
    • Goldman, E.1    Rosenberg, A.H.2    Zubay, G.3    Studier, F.W.4
  • 12
    • 0025766870 scopus 로고
    • A rapid and efficient method for site-directed mutagenesis by PCR using biotinylated universal primers and streptavidin coated magnetic beads
    • Hall, L. and Emery, D.C. (1991) A rapid and efficient method for site-directed mutagenesis by PCR using biotinylated universal primers and streptavidin coated magnetic beads. Prolein Eng., 4, 601.
    • (1991) Prolein Eng. , vol.4 , pp. 601
    • Hall, L.1    Emery, D.C.2
  • 13
    • 9544239167 scopus 로고
    • Extension inhibition analysis of translational initiation complexes
    • Hartz, D., McPheeters, D.S., Traut, R. and Gold, L. (1988) Extension inhibition analysis of translational initiation complexes. Methods Enzymol., 154, 367-382.
    • (1988) Methods Enzymol. , vol.154 , pp. 367-382
    • Hartz, D.1    McPheeters, D.S.2    Traut, R.3    Gold, L.4
  • 14
    • 0024835265 scopus 로고
    • Selection of the initiator tRNA by Escherichia coli initiation factors
    • Hartz, D., McPheeters, D.S. and Gold, L. (1989) Selection of the initiator tRNA by Escherichia coli initiation factors. Genes Dev., 3, 1899-1912.
    • (1989) Genes Dev. , vol.3 , pp. 1899-1912
    • Hartz, D.1    McPheeters, D.S.2    Gold, L.3
  • 15
    • 0026033684 scopus 로고
    • Influence of mRNA determinants on translation initiation in Escherichia coli
    • Hartz, D., McPheeters, D.S. and Gold, L. (1991) Influence of mRNA determinants on translation initiation in Escherichia coli. J. Mol. Biol., 218, 83-97.
    • (1991) J. Mol. Biol. , vol.218 , pp. 83-97
    • Hartz, D.1    McPheeters, D.S.2    Gold, L.3
  • 16
    • 0023373136 scopus 로고
    • Specialized ribosome system: Preferential translation of a single mRNA species by a sub-population of mutated ribosomes in Escherichia coli
    • Hui, A. and de Boer, H.A. (1987) Specialized ribosome system: preferential translation of a single mRNA species by a sub-population of mutated ribosomes in Escherichia coli. Proc. Natl Acad. Sci. USA, 84, 4762-4766.
    • (1987) Proc. Natl Acad. Sci. USA , vol.84 , pp. 4762-4766
    • Hui, A.1    De Boer, H.A.2
  • 17
    • 0028094403 scopus 로고
    • Footprinting mRNA-ribosome complexes with chemical probes
    • Hüttenhofer, A. and Noller, H.F. (1994) Footprinting mRNA-ribosome complexes with chemical probes. EMBO J., 13, 3892-3901.
    • (1994) EMBO J. , vol.13 , pp. 3892-3901
    • Hüttenhofer, A.1    Noller, H.F.2
  • 18
    • 0027497505 scopus 로고
    • Multiple control of Escherichia coli lysyl-tRNA synthetase expression involves a transcriptional repressor and a translational enhancer element
    • Ito, K., Kawakami, K. and Nakamura, Y. (1993) Multiple control of Escherichia coli lysyl-tRNA synthetase expression involves a transcriptional repressor and a translational enhancer element. Proc. Natl Acad. Sci. USA, 90, 302-306.
    • (1993) Proc. Natl Acad. Sci. USA , vol.90 , pp. 302-306
    • Ito, K.1    Kawakami, K.2    Nakamura, Y.3
  • 19
    • 0029040550 scopus 로고
    • A second putative mRNA binding site on the Escherichia coli ribosome
    • Ivanov, I.G., Alexandrova, R.A., Dragulev, B.P. and AbouHaidar, M.G. (1995) A second putative mRNA binding site on the Escherichia coli ribosome. Gene, 160, 75-79.
    • (1995) Gene , vol.160 , pp. 75-79
    • Ivanov, I.G.1    Alexandrova, R.A.2    Dragulev, B.P.3    Abouhaidar, M.G.4
  • 20
    • 0023053516 scopus 로고
    • Expression, purification, and operator binding of the transposon Tn1721 encoded Tet repressor
    • Klock, G. and Hillen, W. (1986) Expression, purification, and operator binding of the transposon Tn1721 encoded Tet repressor. J. Mol. Biol., 189, 633-641.
    • (1986) J. Mol. Biol. , vol.189 , pp. 633-641
    • Klock, G.1    Hillen, W.2
  • 21
    • 0023613953 scopus 로고
    • Rapid and efficient site-specific mutagenesis without phenotypic selection
    • Kunkel, T.A., Roberts, J.D. and Zakour, R.A. (1987) Rapid and efficient site-specific mutagenesis without phenotypic selection. Methods Enzymol., 154, 367-382.
    • (1987) Methods Enzymol. , vol.154 , pp. 367-382
    • Kunkel, T.A.1    Roberts, J.D.2    Zakour, R.A.3
  • 23
    • 0028173550 scopus 로고
    • Prokaryotic translation: The interactive pathway leading to initiation
    • McCarthy, J.E.G. and Brimacombe, R. (1994) Prokaryotic translation: the interactive pathway leading to initiation. Trends Genet., 10, 402-407.
    • (1994) Trends Genet. , vol.10 , pp. 402-407
    • McCarthy, J.E.G.1    Brimacombe, R.2
  • 24
    • 0025051883 scopus 로고
    • Translational control of prokaryotic gene expression
    • McCarthy, J.E.G. and Gualerzi, C.O. (1990) Translational control of prokaryotic gene expression. Trends Genet., 6, 78-85.
    • (1990) Trends Genet. , vol.6 , pp. 78-85
    • McCarthy, J.E.G.1    Gualerzi, C.O.2
  • 25
    • 0022021846 scopus 로고
    • Translational initiation frequency of atp genes from Escherichia coli: Identification of an intercistronic sequence that enhances translation
    • McCarthy, J.E.G., Schairer, H.U. and Sebald, W. (1985) Translational initiation frequency of atp genes from Escherichia coli: identification of an intercistronic sequence that enhances translation. EMBO J., 4, 519-526.
    • (1985) EMBO J. , vol.4 , pp. 519-526
    • McCarthy, J.E.G.1    Schairer, H.U.2    Sebald, W.3
  • 27
    • 0003785155 scopus 로고
    • Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • Miller, J. (1972) Experiments in Molecular Genetics. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (1972) Experiments in Molecular Genetics
    • Miller, J.1
  • 28
    • 0022980288 scopus 로고
    • Interconversion of active and inactive 30S ribosomal subunits is accompanied by a conformational change in the decoding region of 16S rRNA
    • Moazed, D., vanSolk, B.J., Douthwaite, S. and Noller, H.F. (1986) Interconversion of active and inactive 30S ribosomal subunits is accompanied by a conformational change in the decoding region of 16S rRNA. J. Mol. Biol., 191, 483-493.
    • (1986) J. Mol. Biol. , vol.191 , pp. 483-493
    • Moazed, D.1    VanSolk, B.J.2    Douthwaite, S.3    Noller, H.F.4
  • 29
    • 0025788228 scopus 로고
    • 32 synthesis during the heat shock response of Escherichia coli
    • 32 synthesis during the heat shock response of Escherichia coli. Proc. Natl Acad. Sci. USA, 88, 10515-10519.
    • (1991) Proc. Natl Acad. Sci. USA , vol.88 , pp. 10515-10519
    • Nagai, H.1    Yuzawa, H.2    Yura, T.3
  • 30
    • 0024359013 scopus 로고
    • A novel sequence element derived from bacteriophage T7 mRNA acts as an enhancer of translation of the lacZ gene in Escherichia coli
    • Olins, P.O. and Rangwala, S.H. (1989) A novel sequence element derived from bacteriophage T7 mRNA acts as an enhancer of translation of the lacZ gene in Escherichia coli. J. Biol. Chem., 264, 16973-16976.
    • (1989) J. Biol. Chem. , vol.264 , pp. 16973-16976
    • Olins, P.O.1    Rangwala, S.H.2
  • 31
    • 0023394821 scopus 로고
    • The functional stability of the lacZ transcript is sensitive towards sequence alterations immediately downstream of the ribosome binding site
    • Petersen, C. (1987) The functional stability of the lacZ transcript is sensitive towards sequence alterations immediately downstream of the ribosome binding site. Mol. Gen. Genet., 209, 179-187.
    • (1987) Mol. Gen. Genet. , vol.209 , pp. 179-187
    • Petersen, C.1
  • 32
    • 0024232373 scopus 로고
    • Messenger RNA recognition in Escherichia coli: A possible second site of interaction with 16S ribosomal RNA
    • Petersen, G.B., Stockwell, P.A. and Hill, D.F. (1988) Messenger RNA recognition in Escherichia coli: a possible second site of interaction with 16S ribosomal RNA. EMBO J., 7, 3957-3962.
    • (1988) EMBO J. , vol.7 , pp. 3957-3962
    • Petersen, G.B.1    Stockwell, P.A.2    Hill, D.F.3
  • 33
    • 0029286628 scopus 로고
    • Hydroxyl radical footprinting of ribosomal proteins on 16S rRNA
    • Powers, T. and Noller, H.F. (1995) Hydroxyl radical footprinting of ribosomal proteins on 16S rRNA. RNA, 1, 194-209.
    • (1995) RNA , vol.1 , pp. 194-209
    • Powers, T.1    Noller, H.F.2
  • 34
    • 0023930985 scopus 로고
    • Probing the assembly of the 3′ major domain of 16S ribosomal RNA
    • Powers, T., Changchien, L.M., Craven, G.R. and Noller, H.F. (1988) Probing the assembly of the 3′ major domain of 16S ribosomal RNA. J. Mol. Biol., 201, 697-716.
    • (1988) J. Mol. Biol. , vol.201 , pp. 697-716
    • Powers, T.1    Changchien, L.M.2    Craven, G.R.3    Noller, H.F.4
  • 35
    • 0024278076 scopus 로고
    • Dominance in lambda S mutations and evidence for translational control
    • Raab, R., Neal, G., Sohaskey, C., Smith, J. and Young, R. (1988) Dominance in lambda S mutations and evidence for translational control. J. Mol. Biol., 199, 95-105.
    • (1988) J. Mol. Biol. , vol.199 , pp. 95-105
    • Raab, R.1    Neal, G.2    Sohaskey, C.3    Smith, J.4    Young, R.5
  • 38
    • 0027214113 scopus 로고
    • Site-directed crosslinking of mRNA analogues to 16S ribosomal RNA: A complete scan of cross-links from all positions between '+1' and '+16' on the mRNA, downstream from the decoding site
    • Rinke-Appel, J., Jünke, N., Brimacombe, R., Dokudovskaya, S., Dontsova, O. and Bogdanov, A. (1993) Site-directed crosslinking of mRNA analogues to 16S ribosomal RNA: a complete scan of cross-links from all positions between '+1' and '+16' on the mRNA, downstream from the decoding site. Nucleic Acids Res., 21, 2853-2859.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 2853-2859
    • Rinke-Appel, J.1    Jünke, N.2    Brimacombe, R.3    Dokudovskaya, S.4    Dontsova, O.5    Bogdanov, A.6
  • 40
    • 0026736324 scopus 로고
    • Translation of the prophage lambda cl transcript
    • Shean, C.S. and Gottesman, M.E. (1992) Translation of the prophage lambda cl transcript. Cell, 70, 513-522.
    • (1992) Cell , vol.70 , pp. 513-522
    • Shean, C.S.1    Gottesman, M.E.2
  • 42
    • 0027502170 scopus 로고
    • Ribosome initiation complex formation with the pseudonoted alpha operon messenger RNA
    • Spedding, G., Gluick, T.C. and Draper, D.E. (1993) Ribosome initiation complex formation with the pseudonoted alpha operon messenger RNA. J. Mol. Biol., 229, 609-622.
    • (1993) J. Mol. Biol. , vol.229 , pp. 609-622
    • Spedding, G.1    Gluick, T.C.2    Draper, D.E.3
  • 43
    • 0025361538 scopus 로고
    • The initiation of translation in E.coli: Apparent base-pairing between the 16S rRNA and downstream sequences on the mRNA
    • Sprengart, M.L. Fatscher, H.P. and Fuchs, E. (1990) The initiation of translation in E.coli: apparent base-pairing between the 16S rRNA and downstream sequences on the mRNA. Nucleic Acids Res., 18, 1719-1723.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 1719-1723
    • Sprengart, M.L.1    Fatscher, H.P.2    Fuchs, E.3
  • 44
    • 0030064682 scopus 로고    scopus 로고
    • The downstream box: An efficient and independent translation initiation signal in Escherichia coli
    • Sprengart, M.L., Fuchs, E. and Porter, A.G. (1996) The downstream box: an efficient and independent translation initiation signal in Escherichia coli. EMBO J., 15, 665-674.
    • (1996) EMBO J. , vol.15 , pp. 665-674
    • Sprengart, M.L.1    Fuchs, E.2    Porter, A.G.3
  • 45
    • 0024241761 scopus 로고
    • Structural analysis of RN17 using chemical and enzymatic probing monitored by primer extension
    • Stern, S., Moazed, D. and Noller, H.F. (1988) Structural analysis of RN17 using chemical and enzymatic probing monitored by primer extension. Methods Enzymol., 164, 481-489.
    • (1988) Methods Enzymol. , vol.164 , pp. 481-489
    • Stern, S.1    Moazed, D.2    Noller, H.F.3
  • 46
    • 0020480282 scopus 로고
    • Characterization of translatonal initiation sites in E.coli
    • Stormo, G.D., Schneider, T.D. and Gold, L. (1982) Characterization of translatonal initiation sites in E.coli, Nucleic Acids Res., 10, 2971-2996.
    • (1982) Nucleic Acids Res. , vol.10 , pp. 2971-2996
    • Stormo, G.D.1    Schneider, T.D.2    Gold, L.3
  • 47
    • 0028834096 scopus 로고
    • Dual translational start motif evolutionarily conserved in the holin gene of Bacillus subtilis phage φ29
    • Tedin, K., Resch, A., Steiner, M. and Bläsi, U. (1995) Dual translational start motif evolutionarily conserved in the holin gene of Bacillus subtilis phage φ29. Virology, 206, 479-484.
    • (1995) Virology , vol.206 , pp. 479-484
    • Tedin, K.1    Resch, A.2    Steiner, M.3    Bläsi, U.4
  • 48
    • 0024598211 scopus 로고
    • An additional ribosome binding site on mRNA of highly expressed genes and a bifunctional site on the colicin fragment of 16S rRNA from Escherichia coli: Important determinants of the efficiency of translation initiation
    • Thanaraj, T.A. and Pandit, M.W. (1989) An additional ribosome binding site on mRNA of highly expressed genes and a bifunctional site on the colicin fragment of 16S rRNA from Escherichia coli: important determinants of the efficiency of translation initiation. Nucleic Acids Res., 17, 2973-2985.
    • (1989) Nucleic Acids Res. , vol.17 , pp. 2973-2985
    • Thanaraj, T.A.1    Pandit, M.W.2
  • 49
    • 0028040005 scopus 로고
    • Ribosome-messenger recognition in the absence of the Shine-Dalgarno interactions
    • Tzareva, N.V., Makhno, V.I. and Boni, I.V. (1994) Ribosome-messenger recognition in the absence of the Shine-Dalgarno interactions. FEBS Lett., 337, 189-194.
    • (1994) FEBS Lett. , vol.337 , pp. 189-194
    • Tzareva, N.V.1    Makhno, V.I.2    Boni, I.V.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.