DNA sequence analysis of the VPH1-SNF2 region on chromosome XV of Saccharomyces cerevisiae

Yeast

Volumn 12, Issue 10 B, 1996, Pages 1059-1064

  Chéret, Geneviève ^a   Bernardi, Alberto ^b   Sor, Frédéric ^a  

^a INSTITUT CURIE   (France)

^b INSTITUT JACQUES MONOD   (France)

Author keywords

CAP20; Chromosome XV; DFR1; DHFR; DNA; Heat shock protein; MOD5; ORF1; PAC1; Protein disulfite isomerase; Saccharomyces cerevisiae; Sigma; SNF2; tRNA ala; VPH1; Yeast

Indexed keywords

HEAT SHOCK PROTEIN; PROTEIN DISULFIDE ISOMERASE;

ARTICLE; CHROMOSOME 15; CONTROLLED STUDY; DNA SEQUENCE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SACCHAROMYCES CEREVISIAE;

EID: 0029806890     PISSN: 0749503X     EISSN: None     Source Type: Journal    
DOI: 10.1002/(SICI)1097-0061(199609)12:10B<1059::AID-YEA994>3.0.CO;2-7     Document Type: Article

References (30)

1. Altmann, M., Kriege, M. and Trachsel, H. (1989). Nucleotide sequence of the gene encoding a 20 kDa protein associated with the cap binding protein eIF-4E from Saccharomyces cerevisiae. Nucl. Acids Res. 17, 7520.
2. Altschul, S. F., Gish, W., Miller, W., Myers, E. W. and Lipman, D. J. (1990). Basic local alignment search tool. J. Mol. Biol. 215, 403-410.
3. Barclay, B. J., Huang, T., Nagel, M. G., Misener, V. L., Games, J. C. and Wahl, G. M. (1988). Mapping and sequencing of the dihydrofolate reductase gene (DFR1) of Saccharomyces cerevisiae. Gene 63, 175-185.
4. Bertani, L. E. and Chambell, J. L. (1994). The isolation and characterisation of the gene (dfr1) encoding dihydrofolate reductase (DHFR) in Schizosaccharomyces pombe. Gene 147, 131-135.
5. Clark, M. W., Kent, T., Storms, R. K. et al. (1994). Sequencing of chromosome I of Saccharomyces cerevisiae: analysis of the 42 kbp SPO7-CEN1-CDC15 region. Yeast 10, 535-541.
6. Dear, S. and Staden, R. (1991). A sequence assembly and editing program for efficient management of large projects. Nucl. Acids Res. 19, 3907-3911.
7. Drabkin, H. J. and RajBhandary, U. L. (1985). Attempted expression of a human initiator tRNA gene in Saccharomyces cerevisiae. J. Biol. Chem. 260, 5596-5602.
8. Endicott, J. A. and Ling, V. (1989). The biochemistry of p-glycoprotein-mediated multidrug resistance. Annu. Rev. Biochem. 58, 137-171.
9. Fling, M. E., Kopf, J., Tamarkin, A., Gorman, J. A., Smith, H. A. and Koltin, Y. (1991). Analysis of a Candida albicans gene that encodes a novel mechanism for resistance to benomyl and methotrexate. Molec. Gen. Gent. 227, 318-329.
10. Freedman, R. B. (1989). Protein disulfide isomerase: multiple roles in the modification of nascent secretory proteins. Cell 57, 1069-1072.
11. Hanks, S. H., Quinn, A. M. and Hunter, T. (1988). The protein kinase family: conserved features and deduced phylogeny of the catalytic domains. Science 241, 42-52.
12. Hempel, W. M. and DeFranco, A. L. (1991). Expression of phospholipase C isozymes by murine B lymphocytes. J Immunol. 146, 3713-3720.
13. Hirano, N., Shibasaki, F., Kato, H. et al. (1994). Molecular cloning and characterization of a cDNA for bovine phospholipase C-α: proposal of redesignation of phospholipase C-α. Biochem. Biophys. Res. Comun. 204, 375-382.
14. Huang, S.-E., Tomich, J. M., Wu, H., Jong, A. and Holcenberg, J. (1991). Human deoxycytidine kinase. Sequence of cDNA clones and analysis of expression in cell lines with and without enzyme activity. J. Biol. Chem. 266, 5353.
15. Langgut, W., Entrup, R. and Schweizer, E. (1986). Isolation of a nuclear yeast gene involved in the mitochondrial import of cytoplasmically synthesized precursor proteins. Curr. Genet. 11, 177-184.
16. Laurent, B. C., Treitel, M. and Carlson, M. (1991). Functional interdependence of the yeast SNF2, SNF5, and SNF6 proteins in transcriptional activation. Proc. Natl. Acad Sci. USA 88, 2687-2691.
17. Manolson, M. F., Proteau, D., Preston, R. A. et al. (1992). The VPH1 gene encodes a 95-kDa integral membrane polypeptide required for the in-vivo assembly and activity of the yeast vacuolar H+-ATPase. J. Biol. Chem. 267, 14294-14303.
18. Marck, C. (1988). DNA Strider: a C program for the fast analysis of DNA and protein sequences on the Apple Macintosh family of computers. Nucl. Acids Res. 16, 1829-1836.
19. Mazzarella, R. A., Srinivasan, M., Haugejorden, S. M. and Green, M. (1990). ERp72, an abundant luminal endoplasmic reticulum protein, contains three copies of the active site sequence of protein disulfide isomerase. J. Biol. Chem. 265, 1094-1101.
20. Munro, S. and Pelham, R. B. (1987). A C-terminal signal prevents secretion of luminal ER proteins. Cell 48, 899-907.
21. Nairn, J., Price, N. C., Fothergill-Gilmore, L. A., Walker, G. E., Fothergill, J. E. and Dunbar, B. (1994). The amino acid sequence of the small monomeric phosphoglycerate mutase from the yeast Schizosaccharomyces pombe. Biochem. J. 297, 603-608.
22. Najarian, D., Dihanich, M. E., Martin, N. C. and Hopper, A. K. (1987). DNA sequence and transcript mapping of MOD5: features of the 5′ region which suggest two translational starts. Molec. Cell. Biol. 7, 185-191.
23. Pauli, D., Tonka, C.-H. and Ayme-Southgate, A. (1988). An unusual split Drosophila heat shock gene expressed during embryogenesis, pupation and in testis. J. Mol. Biol. 200, 47-53.
24. Pearson, W. R. and Lipman, D. J. (1988). Improved tools for biological sequence comparison. Proc. Natl. Acad. Sci. USA 85, 2444-2448.
25. Sandmeyer, S. B., Bilanchone, V. W., Clark, D. J., Morcos, P., Carle, G. F. and Brodeur, G. M. (1988). Sigma elements are position-specific for many different yeast tRNA genes. Nucl. Acids Res. 16, 1499-1515.
26. Sasnauskas, K., Jomantiene, R., Lebediene, E., Lebedys, J., Januska, A. and Janulaitis, A. (1992). Cloning and sequence analysis of a Candida maltosa gene which confers resistance to cycloheximide. Gene 116, 105-108.
27. Skala, J., Purnelle, B., Crouzet, M., Aigle, M. and Goffeau, A. (1991). The open reading frame YCR101 located on chromosome III from Saccharomyces cerevisiae is a putative protein kinase. Yeast 7, 651-655.
28. Vandenbol, M., Jauniaux, J. C. and Grenson, M. (1990). The Saccharomyces cerevisiae NPR1 gene required for the activity of ammonia-sensitive amino acid permease encodes a protein kinase homologue. Mol. Gen. Genet. 222, 393-399.
29. Wilson et al. (1994). 2.2 Mb of contiguous nucleotide sequence from chromosome III of C. elegans. Nature 368, 32-38.
30. Yoshimoto, H. and Yamashita, I. (1991). The GAM11 SNF2 gene of Saccharomyces cerevisiae encodes a highly charged nuclear protein required for transcription of the STA1 complex. Mol. Gen. Genet. 228, 270-280.