Isolation by genetic complementation of two differentially expressed genes for β-isopropylmalate dehydrogenase from Aspergillus niger

Current Genetics

Volumn 30, Issue 4, 1996, Pages 305-311

  Williams, B A ^a   Sillaots, S ^a   Tsang, A ^a   Storms, R ^a  

^a Gina Cody School of Engineering and Computer Science   (Canada)

Author keywords

Aspergillus niger; Differential expression; Genetic complementation; Leucine biosynthesis

Indexed keywords

FUNGAL PROTEIN; ISOENZYME; LEUCINE; MALATE DEHYDROGENASE; MESSENGER RNA;

AMINO ACID SYNTHESIS; ARTICLE; ASPERGILLUS NIGER; CODON USAGE; CONTROLLED STUDY; DNA LIBRARY; ESCHERICHIA COLI; EXPRESSION VECTOR; FUNGAL GENETICS; GENE EXPRESSION; GENE ISOLATION; GENE NUMBER; GENETIC COMPLEMENTATION; GROWTH CURVE; NONHUMAN; NORTHERN BLOTTING; NUCLEOTIDE SEQUENCE; PLASMID; PRIORITY JOURNAL; SACCHAROMYCES CEREVISIAE; SOUTHERN BLOTTING; YEAST;

3-ISOPROPYLMALATE DEHYDROGENASE; ALCOHOL OXIDOREDUCTASES; AMINO ACID SEQUENCE; ASPERGILLUS NIGER; BASE SEQUENCE; CODON; ESCHERICHIA COLI; GENE DOSAGE; GENE EXPRESSION REGULATION, FUNGAL; GENES, FUNGAL; GENETIC COMPLEMENTATION TEST; MOLECULAR SEQUENCE DATA; MUTATION;

ASPERGILLUS NIGER; ESCHERICHIA COLI; SACCHAROMYCES CEREVISIAE;

EID: 0029800647     PISSN: 01728083     EISSN: None     Source Type: Journal    
DOI: 10.1007/s002940050137     Document Type: Article

References (46)

1. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403-10
2. Andreadis A, Hsu YP, Kohlhaw GB, Schimmel P (1982) Nucleotide sequence of yeast LEU2 shows that the 5′-noncoding region has sequences cognate to leucine. Cell 31:319-325
3. Becher D, Wedler H, Schulze H, Bode R, KasÜske A, Samsonova (1991) Correlation of biochemical blocks and genetic lesions in leucine auxotrophic strains of the imperfect yeast Candida maltosa. Mol Gen Genet 227:361-368
4. Bilofsky HS, Burks C (1988) The Genbank (R) genetic sequence data bank. Nucleic Acids Res 16:1861-1864
5. Bennetzen TL, Hall BD (1982) Codon selection in yeast. J Biol Chem 257:3026-3031
6. Boel E, Hjort I, Svensson B, Norris F, Norris KE, Fiil NP (1984) Glucoamylases G1 and G2 from Aspergillus niger are synthesized from two different but closely related mRNAs. EMBO J 3:1097-1102
7. Bos CJ, Slakhorst SM, Debets AJM, Swart K (1993) Linkage group analysis in Aspergillus niger Appl Microbiol Biotechnol 38:742-745
8. Buxton FP, Gwynne DI, Garven S, Sibley S, Davies RW (1987) Cloning and molecular analysis of the ornithine carbamoyl transferase gene of Aspergillus niger. Gene 60:255-266
9. Chow CM, RajBhandary UL (1989) Regulation of the nuclear genes encoding the cytoplasmic and mitochondrial leucyl-tRNA synthetases of Neurospora crassa. Mol Cell Biol 9:4645-4652
10. Crueger W, Crueger A (1989) Enzymes In: Bayer AG (ed) Biotechnology: a textbook of industrial microbiology, 2nd edn. Sinauer Associates, Inc Sunderland, Massachusetts, pp 195-208
11. Ellerstrom M, Josefsson LG, Rask L, Ronne H (1992) Cloning of a cDNA for rape chloroplast 3-isopropylmalate dehydrogenase by genetic complementation in yeast. Plant Mol Biol 18:557-566
12. Essenberg RC, Sharma YK (1993) Cloning of genes for proline and leucine biosynthesis from Brucella abortus by functional complementation in Escherichia coli. J Gen Microbiol 139:87-93
13. Feinberg AP, Vogelstein B (1983) A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 132:6-13
14. Finkelstein DB, Rambosek J, Crawford MS, Soliday CL, McAda PC, Leach J (1989) Protein secretion in Aspergillus niger In: Hershberger CL, Queener SW, Hegeman G (eds) Genetics and molecular biology of industrial microorganisms. American Society of Microbiology, Washington, D.C., pp 295-300
15. Flipphi MJA, Panneman H, van der Veen P, Visser J, de Graaff LH (1993a) Molecular cloning, expression and structure of the endo1,5-alpha-L-arabinase gene of Aspergillus niger. Appl Microbiol Biotechnol 40:318-326
16. Flipphi MJA, van Heuvel M, van der Veen P, Visser J, de Graaff LH (1993b) Cloning and characterization of the abfB gene coding for the major alpha-L-arabinofuranosidase (ABF B) of Aspergillus niger. Curr Genet 24:525-532
17. Fons M, Cami B, Patte JC, Chippaux M (1987) Cloning in Escherichia coli of genes involved in the synthesis of proline and leucine in Desulfovibrio desulfuricans Norway. Mol Gen Genet 206: 141-143
18. Fourney RM, Miyakoshi J, Day RS III, Paterson MS (1988) Northern blotting: efficient RNA staining and transfer. Focus 10:5-6
19. Franke J, Podgorski GJ, Kessin R H (1987) The expression of two transcripts of the phosphodiesterase gene during the development of Dictyostelium discoideum. Dev Biol 124:501-511
20. Hahn S, Pinkham J, Wei R, Miller R, Guarente L (1988) The HAP3 regulatory locus of Saccharomyces cerevisiae encodes divergent overlapping transcripts. Mol Cell Biol 8:655-663
21. Hawkins AR, Lamb HK (1995) The molecular biology of multidomain proteins: selected examples. Eur J Biochem 232:7-18
22. Hoffmann T, Golz C, Schieder O (1994) Foreign DNA sequences are received by a wild-type strain of Aspergillus niger after co-culture with transgenic higher plants. Curr Genet 27:70-76
23. Hsu YP, Schimmel P (1984) Yeast LEU1: repression of mRNA levels by leucine and relationship of the 5′-noncoding region to that of LEU2. J Biol Chem 259:3714-3719
24. Jackson SD, Sonnewald U, Willmitzer L (1993) Cloning and expression analysis of beta-isopropylmalate dehydrogenase from potato. Mol Gen Genet 236:309-314
25. Kafer E (1977) Meiotic and mitotic recombination in Aspergillus and its chromosomal aberrations. Adv Genet 19:33-131
26. Khanh NQ, Albrecht H, Ruttkowski E, Loeffler F, Gottschalk M, Jany KD (1990) Nucleotide and derived amino-acid sequence of a pectinesterase cDNA isolated from Aspergillus niger strain RH 5344. Nucleic Acids Res 18:4262-4272
27. + gene of Schizosaccharomyces pombe. Curr Genet 14:375-379
28. Kimura H, Matumura S, Suzuki M, Sumino Y (1995) Sequencing of the beta-isopropylmalate dehydrogenase gene from Acremonium chrysogenum and its application to heterologous gene expression. GenBank Accession # D50665
29. Kitada K, Yamaguchi E, Arisawa M (1995) Cloning of the Candida glabrata TRP1 and HIS3 genes, and construction of their disruptant strains by sequential integrative transformation. Gene 165:203-296
30. Korman DR, Bayliss FT, Barnett CC, Carmona CL, Kodama KH, Royer TJ, Thompson SA, Ward M, Wilson LJ, Berka RM (1990) Cloning, characterization, and expression of two alpha-amylase genes from Aspergillus niger var. awamori. Curr Genet 17:203-212
31. Kos T, Kuijvenhoven A, Hessing HGM, Pouwels PH, van den Hondel CAMJJ (1988) Nucleotide sequence of the Aspergillus niger trpC gene: structural relationship with analogous genes of other organisms. Curr Genet 13:137-144
32. Kriechbaum M, Heilmann HJ, Wientjes FJ, Hahn M, Jany KD, Gassen HG, Sharif F, Alaeddinoglu G (1989) Cloning and DNA sequence analysis of the glucose oxidase gene from Aspergillus niger NRRL-3. FEBS Lett 255:63-66
33. Li Q, Jarai G, Yaghmai B, Marzluf GA (1993) The leu-1 gene of Neurospora crassa: nucleotide and deduced amino-acid sequence comparisons. Gene 136:301-305
34. May GS, Gambino J, Weatherbee JA, Morris NR (1985) Identification of functional analysis of beta-tubulin genes by site-specific integrative transformation in Aspergillus nidulans. J Chem Biol 101:712
35. O'Connell MJ, Kelly JM (1989) Physical characterization of the aldehyde-dehydrogenase-encoding gene of Aspergillus niger. Gene 84:173-180
36. Ohno S (1970) The differential regulation of former alleles and their transformation to isozyme genes. In: Evolution by gene duplication. Springer-Verlag, New York, pp 67-71
37. Pearson WR, Lipman DJ (1988) Improved tools for biological sequence comparison. Proc Natl Acad Sci USA 85:2444-2448
38. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual, 2nd edn. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York
39. Satyanarayana T, Umbarger HE, Lindegren G (1968) Biosynthesis of branched-chain anino acids in yeast: correlation of biochemical blocks and genetic lesions in leucine auxotrophs. J Bacteriol 96:2012-2017
40. Schiestl RH, Gietz RD (1989) High-efficiency transformation of intact yeast cells using single-stranded nucleic acids as a carrier. Curr Genet 16:339-346
41. Schrickx JM, Krave AS, Verdoes JC, van den Hondel CAMJJ, Stouthamer AH, van Verseveld H (1993) Growth and product formation in chemostat and recycling cultures by Aspergillus niger N402 and a glucoamylase overproducing transformant, provided with multiple copies of the glaA gene. J Gen Microbiol 139:2801-2810
42. Somers JM, Amzallag A, Middleton RB (1973) Genetic fine structure of the leucine operon of Escherichia coli K-12. J Bacteriol 113:1268-1272
43. Strizhov NI, Kryukov VM, Bur'yanov YI, Baev AA (1990) Beta-isopropyl malate dehydrogenase gene of Agrobacterium tumefaciens C58: coding and primary structure. Dokl Biol Sci 288:287-291
44. Takahashi K, Inoue H, Sakai K, Kohama T, Kitahara S, Takishima K, Tanji M, Athauda SB, Takahashi T, Akanuma H, Mamiya G, Yamasaki M (1991) The primary structure of Aspergillus niger acid proteinase A. J Biol Chem 266:19480-19483
45. Van Gorcom RFM, Boschloo JG, Kuijvenhoven A, Lange J, Van Vark AJ, Bos CJ, Van Balken JAM, Pouwels PH, van den Hondel CAMJJ (1990) Isolation and molecular characterisation of the benzoate-para-hydroxylase gene (bphA) of Aspergillus niger: a member of a new gene family of the cytochrome P450 superfamily. Mol Gen Genet 223:192-197
46. Wilson LJ, Ward M, Carmona C (1988) Sequence of the Aspergillus niger pyrG gene. Nucleic Acids Res 16:2339-2349