Cloning of the Penicillium minioluteum gene encoding dextranase and its expression in Pichia pastoris

Yeast

Volumn 12, Issue 12, 1996, Pages 1187-1200

  Roca, Hernan ^a   Garcia, Bianca ^a   Rodriguez, Efrain ^a   Mateu, Dania ^a   Coroas, Laura ^a   Cremata, Jose ^a   Garcia, Rossana ^a   Pons, Tirso ^a   Delgado, Julio ^a  

^a CENTER FOR GENETIC ENGINEERING AND BIOTECHNOLOGY   (Cuba)

Author keywords

Dextranase; Heterologous gene expression; Penicillium minioluteum; Pichia pastoris; Protein secretion

Indexed keywords

DEXTRANASE;

AMINO ACID SEQUENCE; ARTICLE; CONTROLLED STUDY; DNA SEQUENCE; ENDOMYCETALES; GENE EXPRESSION; MOLECULAR CLONING; NONHUMAN; PENICILLIUM; PRIORITY JOURNAL; PROTEIN SECRETION;

AMINO ACID SEQUENCE; BASE SEQUENCE; BLOTTING, SOUTHERN; CLONING, MOLECULAR; DEXTRANASE; DNA, COMPLEMENTARY; GENE EXPRESSION; GENES, FUNGAL; GENOMIC LIBRARY; INTRONS; MOLECULAR SEQUENCE DATA; PENICILLIUM; PICHIA; RECOMBINANT PROTEINS; SEQUENCE HOMOLOGY, AMINO ACID; TRANSFORMATION, GENETIC;

ARTHROBACTER SP.; ARTHROBACTER SP. CB-8; PENICILLIUM MINIOLUTEUM; PICHIA PASTORIS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCETALES;

EID: 0029790702     PISSN: 0749503X     EISSN: None     Source Type: Journal    
DOI: 10.1002/(SICI)1097-0061(19960930)12:12<1187::AID-YEA986>3.0.CO;2-U     Document Type: Article

References (51)

1. Altschul, S. F., Gish, W., Miller, W., Myers, E. W. and Lipman, D. J. (1990). Basic local alignment search tool. J. Mol. Biol. 215, 403-410.
2. Bailey, R. W. and Clarke, R. T. J. (1959). A bacterial dextranase. Biochem. J. 72, 49-54.
3. Ballance, D. J. (1990). Transformation systems for filamentous fungi and an overview of fungal gene structure. In Leong, S. A. and Berka, R. M. (Eds), Molecular Industrial Mycology. Marcel Dekker, New York, pp. 1-29.
4. Becker, D. M. and Guarente, L. (1991). High-efficiency transformation of yeast by eletroporation. Methods in Enzymol. 194, 182-187.
5. Brierley, R. A., Davis, G. R. and Holtz, G. C. (1994). Production of insulin-like growth factor-1 in methylotrophic yeast cells. United States Patent No. 5 324-639.
6. Burkhard, R. and Sander, C. (1994). Combining evolutionary information and neural networks to predict protein secondary structure. Proteins 19, 55-72.
7. Chaplin, M. F. (1986). Monosaccharides. In Chaplin, M. F. and Kennedy, J. F. (Eds), Carbohydrate Analysis. A Practical Approach. IRL Press, Oxford, pp. 1-36.
8. Clare, J. J., Rayment, F. B., Ballantine, S. P., Sreekrishna, K. and Romanes, M. A. (1991a). High-level expression of tetanus toxin fragment C in Pichia pastoris strains containing multiple tandem integrations of the gene. Bio/Technology 9, 455-460.
9. Clare, J. J., Romanos, M. A., Rayment, F. B. et al. (1991b). Production of mouse epidermal growth factor in yeast: high-level secretion using Pichia pastoris strains containing multiple gene copies. Gene 105, 205-212.
10. Cregg, J. M., Tschopp, J. F., Stillman, C. et al. (1987). High-level expression and efficient assembly of hepatitis B surface antigen in the methylotrophic yeast Pichia pastoris. Bio/Technology 5, 479-485.
11. Dynan, W. S. and Tjian, R. (1985). Control of eukaryotic messenger RNA synthesis by sequence-specific DNA-binding proteins. Nature 316, 774-778.
12. Feinberg, A. P. and Vogelstein, B. (1983). A technique for radiolabelling DNA restriction endonuclease fragments to high specific activity. Anal. Biochem. 132, 6-13.
13. Fulcher, R. P. and Inkerman, P. A. (1976). Dextranase I. Characterization of the enzyme for use in sugar mills. Proc. Queensl. Soc. Sugar Cane Technol. 43rd Conf., 295-305.
14. Galzy, P. and Slonimski, P. P. (1975). Variation de la levure aucours de la croissance sur l'acide lactique ou sur glucose comme source de carbone. C. R. Acad. Sci. Paris 245, 2423-2427.
15. Garcia, B., Roca, H., Margolles, E., Mateu, D., Raices, M., Gonzalez, M. E., Herrera, L. and Delgado, J. Manuscript in preparation.
16. Garcia, R., Gonzalez, L. J., Betancourt, L. H., Montesino, R., Quintero, O., Rodriguez, I., Roca, H., Garcia, B. and Cremata, J. Manuscript in preparation.
17. Guilarte, B., Cuervo, R., Rodriguez, J. and Puente, L. (1985). Biosíntesis de dextranasa por el Penicillium sp. HI-4. Cuba-Azúcar 2, 9.
18. Gurr, S. J., Unkles, S. E. and Kinghorn, J. R. (1988). The structure and organization of nuclear genes of filamentous fungi. In Kinghorn, J. R. (Ed.), Gene Structure in Eukaryotic Microbes, vol. 23. Special publication of the Society for General Microbiology. IRL. Press, Oxford, pp. 93-139.
19. Hattori, A. and Ishibashi, K. (1981). Screening of dextranase-producing microorganisms. Agric. Biol. Chem. 45, 2347-2349.
20. Henikoff, S. and Henikoff, J. G. (1992). Amino acid substitution matrices from protein blocks. Proc. Natl. Acad. Sci. U.S.A. 89, 10915-10919.
21. Henrissat, B. (1991). A classification of glycosyl hydrolases based on amino acid sequence similarities. Biochem J. 280, 309-316.
22. Henrissat, B. and Bairoch, A. (1993). New families in the classification of glycosyl hydrolases based on amino acid sequence similarities. Biochem J. 293, 781-788.
23. Hiraoka, N., Fukumoto, J. and Tsuru, D. (1972). Studies on mold dextranases. III. Purification and some enzymatic properties. J. Biochem. 71, 57-64.
24. Imrie, F. K. E. and Tilbury, R. H. (1972). Polysaccharides in sugar cane and its products. Sugar Technol. Rev. 1, 291-361.
25. Inkerman, P. A. (1980). An appraisal of the use of dextranase. Proc. Int. Soc. Sugar Cane Technol. 17, 2411-2427.
26. Iwai, A., Ito, H., Mizuno, T. et al. (1994). Molecular cloning and expression of an isomalto-dextranase gene from Arthrobacter globiformis T6. J. Bacteriol. 176, 7730-7734.
27. Keniry, J. S., Lee, J. B. and Mahoney, V. C. (1969). Improvements in the dextran assay of cane sugar materials. Int. Sugar J. 71, 230-233.
28. Kosaric, N., Yu, K. and Zajic, J. E. (1973). Dextranase production from Penicillium funiculosum. Biotech. Bioeng. 15, 729-741.
29. Laemmli, U. K. (1970). Cleavage of structural proteins during the assembly of the head of bacteriophage T-4. Nature 227, 680-685.
30. Meissner, P. S., Sisk, W. P. and Berman, M. L. (1987). Bacteriophage K cloning system for the construction of directional cDNA libraries. Proc. Natl. Acad. Sci. U.S.A. 84, 4171.
31. Miller, G. L. (1959). Use of dinitrosalicylic acid reagent for the determination of reducing sugars. Anal. Chem. 31, 426-428.
32. Ohnishi, Y., Kubo, S., Ono, Y. et al. (1995). Cloning and sequencing of the gene coding for dextranase from Streptococcus salivarius. Gene 156, 93-96.
33. Okushima, M., Sugino, D., Kouno, Y. et al. (1991). Molecular cloning and nucleotide sequencing of the Arthrobacter dextranase gene and its expression in Escherichia coli and Streptococcus sanguis. Jpn. J. Genet. 66, 173-187.
34. Paifer, E., Margolles, E., Cremata, J., Montesino, R., Herrera, L. and Delgado, J. M. (1994). Efficient expression and secretion of recombinant alpha amylase in Pichia pastoris using two different signal sequences. Yeast 10, 1415-1419.
35. Pearson, W. R. and Lipman, D. J. (1988). Improved tools for biological sequence analysis. Proc. Natl. Acad. Sci. U.S.A. 85, 2444-2448.
36. Raeder, U. and Broda, P. (1985). Rapid preparation of DNA from filamentous fungi. Lett. Appl. Microbiol. 1, 17-20.
37. Raices, M., Molerio, M. C., Li, I. M. et al. (1991). Purificación y caracterización parcial de una enzima dextranasa a partir de una cepa de hongo del género Penicillium. Biotecnología Aplicada 8, 248-255.
38. 1 on oligosaccharides. Carbohydr. Res. 32, 251-260.
39. Rodríguez, M., Rubiera, R., Penichet, M. et al. (1994). High level expression of the B. microplus Bm86 antigen in the yeast P. pastoris forming highly immunogenic particle for cattle. J. Biotechnol. 33, 135-146.
40. Rothstein, R. (1985). Cloning in yeast. In Glover, D. M. (Ed.), DNA Cloning II. IRL Press, Oxford, pp. 45-46.
41. Russell, R. R. B. and Ferretti, J. J. (1990). Nucleotide sequence of the dextran glucosidase (dexB) gene of Streptococcus mutans. J. Gen. Microbiol. 136, 803-810.
42. Sambrook, J., Fritsch, E. F. and Maniatis, T. (1989). Molecular Cloning. A Laboratory Manual. Cold Spring Harbor Laboratory Press, New York.
43. Sanger, F., Nicklen, S. and Coulson, A. R. (1977). DNA sequencing with chain terminating inhibitors. Proc. Natl. Acad. Sci. U.S.A. 74, 5463-5467.
44. Thompson, J. D., Higgins, D. G. and Gibson, T. J. (1994). CLUSTALW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucl. Acids Res. 22, 4673-4680.
45. Tschopp, J. F., Sverlow, G., Kosson, R., Craig, W. and Grinna, L. (1987). High-level secretion of glycosylated invertase in the methylotrophic yeast, Pichia pastoris. Bio/Technology 5, 1305-1308.
46. von Heijne, G. (1983). Patterns of amino acids near signal-sequence cleavage sites. Eur. J. Biochem. 133, 17-21.
47. von Heijne, G. (1986). A new method for predicting signal sequence cleavage sites. Nucl. Acids Res. 14, 4683-4690.
48. Wanda, S. Y. and Curtiss III, R. (1994). Purification and characterization of Streptococcus sobrinus dextranase produced in recombinant Escherichia coli and sequence analysis of the dextranase gene. J. Bacteriol. 176, 3839-3850.
49. Yanisch-Perron, C., Vieira, J. and Messing, J. (1985). Improved M13 phage cloning vectors and host strains: nucleotide sequences of M13mp18 and pUC19 vectors. Gene 33, 103-119.
50. Yong, V., Herrera, L., Margolles, E. et al. (1991). Method for the expression of heterologous genes in the yeast Pichia pastoris, expression vectors and transformed microorganisms. European Patent Application. Publication number: 0 438 200 A1.
51. - de Pichia pastoris. Biotecnología Aplicada 9, 55-61.