메뉴 건너뛰기




Volumn 5, Issue 9, 1996, Pages 1800-1815

Improved genetic algorithm for the protein folding problem by use of a Cartesian combination operator

Author keywords

conformational search; dynamic programming; genetic algorithms; lattice fitting; Monte Carlo optimization; protein folding; protein structure prediction

Indexed keywords

ALGORITHM; ARTICLE; COMPUTER SIMULATION; GENETIC ANALYSIS; GENETIC RECOMBINATION; HUMAN; HUMAN CELL; PREDICTION; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTEIN FOLDING; PROTEIN STRUCTURE; STRUCTURE ANALYSIS;

EID: 0029786785     PISSN: 09618368     EISSN: None     Source Type: Journal    
DOI: 10.1002/pro.5560050906     Document Type: Article
Times cited : (56)

References (14)
  • 1
    • 0028297304 scopus 로고
    • Folding the main chain of small proteins with the genetic algorithm
    • Dandekar T, Argos P. 1994. Folding the main chain of small proteins with the genetic algorithm. J Mol Biol 236:844-861.
    • (1994) J Mol Biol , vol.236 , pp. 844-861
    • Dandekar, T.1    Argos, P.2
  • 2
    • 0001222580 scopus 로고
    • Lattice representations of globular proteins: How good are they?
    • Godzik A, Kolinski A, Skolnick J. 1993. Lattice representations of globular proteins: How good are they? J Comp Chem 14:1194-1202.
    • (1993) J Comp Chem , vol.14 , pp. 1194-1202
    • Godzik, A.1    Kolinski, A.2    Skolnick, J.3
  • 5
    • 0000778903 scopus 로고
    • A general method for the prediction of the three dimensional structure and folding pathway of globular proteins: Application to designed helical proteins
    • Kolinski A, Godzik A, Skolnick J. 1993. A general method for the prediction of the three dimensional structure and folding pathway of globular proteins: Application to designed helical proteins. J Chem Phys 98:7420-7433.
    • (1993) J Chem Phys , vol.98 , pp. 7420-7433
    • Kolinski, A.1    Godzik, A.2    Skolnick, J.3
  • 6
    • 0028203492 scopus 로고
    • Monte Carlo simulations of protein folding. I. Lattice model and interaction scheme
    • Kolinski A, Skolnick J. 1994. Monte Carlo simulations of protein folding. I. Lattice model and interaction scheme. Proteins Struct Funct Genet 18:338-352.
    • (1994) Proteins Struct Funct Genet , vol.18 , pp. 338-352
    • Kolinski, A.1    Skolnick, J.2
  • 7
    • 0004667533 scopus 로고
    • The genetic algorithm and the conformational search of polypeptides and proteins
    • Le Grand SM, Merz KM Jr. 1994. The genetic algorithm and the conformational search of polypeptides and proteins. Molecular Simulation 13:299-320.
    • (1994) Molecular Simulation , vol.13 , pp. 299-320
    • Le Grand, S.M.1    Merz Jr., K.M.2
  • 8
    • 0001731773 scopus 로고
    • Energy parameters in polypeptides. 10. Improved geometrical parameters and nonbonded interactions for use in the ECEPP/3 algorithm, with application to proline-containing peptides
    • Nemethy G, Gibson KD, Palmer KA, Yoon CN, Paterlini G, Zagari A, Rumsey S, Scheraga HA. 1992. Energy parameters in polypeptides. 10. Improved geometrical parameters and nonbonded interactions for use in the ECEPP/3 algorithm, with application to proline-containing peptides. J Phys Chem 96:6472-6484.
    • (1992) J Phys Chem , vol.96 , pp. 6472-6484
    • Nemethy, G.1    Gibson, K.D.2    Palmer, K.A.3    Yoon, C.N.4    Paterlini, G.5    Zagari, A.6    Rumsey, S.7    Scheraga, H.A.8
  • 9
    • 0022798896 scopus 로고
    • Radial locations of amino acid residues in a globular protein: Correlation with the sequence
    • Nishikawa K, Ooi T. 1986. Radial locations of amino acid residues in a globular protein: Correlation with the sequence. J Biochem 100:1043-1047.
    • (1986) J Biochem , vol.100 , pp. 1043-1047
    • Nishikawa, K.1    Ooi, T.2
  • 10
    • 0028865590 scopus 로고
    • Ab initio structure prediction for small polypeptides and protein fragments using genetic algorithms
    • Pedersen JT, Moult J. 1995. Ab initio structure prediction for small polypeptides and protein fragments using genetic algorithms. Proteins Struct Funct Genet 23:454-460.
    • (1995) Proteins Struct Funct Genet , vol.23 , pp. 454-460
    • Pedersen, J.T.1    Moult, J.2
  • 11
    • 0029016005 scopus 로고
    • Accurate general method for lattice approximation of three-dimensional structure of a chain molecule
    • Rykunov DS, Reva BA, Finkelstein AV. 1995. Accurate general method for lattice approximation of three-dimensional structure of a chain molecule. Proteins Struct Funct Genet 22:100-109.
    • (1995) Proteins Struct Funct Genet , vol.22 , pp. 100-109
    • Rykunov, D.S.1    Reva, B.A.2    Finkelstein, A.V.3
  • 12
    • 0027503403 scopus 로고
    • Reduced representation model of protein structure prediction: Statistical potential and genetic algorithms
    • Sun S. 1993. Reduced representation model of protein structure prediction: Statistical potential and genetic algorithms. Protein Sci 2:762-785.
    • (1993) Protein Sci , vol.2 , pp. 762-785
    • Sun, S.1
  • 13
    • 0028841399 scopus 로고
    • A simple protein folding algorithm using a binary code and secondary structure constraints
    • Sun S, Thomas PD, Dill KA. 1995. A simple protein folding algorithm using a binary code and secondary structure constraints. Protein Eng 8:769-778.
    • (1995) Protein Eng , vol.8 , pp. 769-778
    • Sun, S.1    Thomas, P.D.2    Dill, K.A.3
  • 14
    • 0027245418 scopus 로고
    • Genetic algorithms for protein folding simulations
    • Unger R, Moult J. 1993. Genetic algorithms for protein folding simulations. J Mol Biol 231:75-81.
    • (1993) J Mol Biol , vol.231 , pp. 75-81
    • Unger, R.1    Moult, J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.