Sequencing and analysis of a 35.4 kb region on the left arm of chromosome IV from Saccharomyces cerevisiae reveal 23 open reading frames

Yeast

Volumn 12, Issue 10 B, 1996, Pages 1085-1090

  Eide, Liv Gunn ^a   Sander, Chris ^a   Prydz, Hans ^a  

^a UNIVERSITY OF OSLO   (Norway)

Author keywords

Chromosome IV; GCV1; HEX2 SRN1; RPL2B; RPS18A; Saccharomyces cerevisiae; SES1; SNQ2; tRNA Val 12a

Indexed keywords

ARTICLE; CHROMOSOME 4; CONTROLLED STUDY; GENE SEQUENCE; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PRIORITY JOURNAL; SACCHAROMYCES CEREVISIAE;

SACCHAROMYCES CEREVISIAE;

EID: 0029786615     PISSN: 0749503X     EISSN: None     Source Type: Journal    
DOI: 10.1002/(sici)1097-0061(199609)12:10b<1085::aid-yea9>3.0.co;2-0     Document Type: Article

References (25)

1. André, B., Cziepluch, C., Hein, C., Jauniaux, J. C., Urrestarazu, A. and Visser, S. EMBL AC Z35914.
2. André, B., Cziepluch, C., Hein, C., Jauniaux, J. C., Urrestarazu, A. and Vissers, S. SwissProt AC P38226.
3. Brown, A. P., Coleman, J., Tommey, A. M., Watson, M. D. and Slabas, A. R. (1994). Isolation and characterization of a maize cDNA that complements a 1-acyl sn-glycerol-3-phosphate acyltransferase mutant of E. coli and encodes a protein which has similarities to other acyltransferases. Plant. Mol. Biol. 26, 211-223.
4. Casari, G., Andrade, M., Bork, P., et al. (1995). Challenging times for bioinformatics. Nature 376, 647-648.
5. Dujon, B., Alexandraki, D., Andre, B. et al. (1994). Complete DNA sequence of yeast chromosome XI. Nature 369, 371-378.
6. Folley, L. S. and Fox, T. D. (1994). Reduced dosage of genes encoding ribosomal protein S18 suppresses a mitochondrial initiation codon mutation in Saccharomyces cerevisiae. Genetics 137, 369-379.
7. Ju, Q., Morrow, B. E. and Warner, J. R. (1990). REB1, a yeast DNA-binding protein with many targets, is essential for growth and bears some resemblance to the oncogene myb. Mol. Cell. Biol. 10, 5226-5234.
8. Kern, L. (1990). The URK1 gene of Saccharomyces cerevisiae encoding uridine kinase. Nucl. Acids Res. 18, 5279-5279.
9. Lucioli, A., Presutti, C., Ciafre, S., Caffarelli, E., Fragapane, P. and Bossoni, I. (1988). Gene dosage alteration of L2 ribosomal protein genes in Saccharomyces cerevisiae: effects on ribosome synthesis. Mol. Cell. Biol. 8, 4792-4798.
10. McNeil, J. B., Zhang, F. R., Taylor, B. V., Pearlman, R. E. and Bognar, A. L. EMBL AC L41522.
11. Morrow, B. E., Ju, Q. and Warner, J. R. (1993). A bipartite DNA-binding domain in yeast Reb1p. Mol. Cell. Biol. 13, 1173-1182.
12. Nagase, T., Seki, N., Tanaka, A., Ishikawa, K. I. and Nomura, N. Prediction of the coding sequences of unidentified human genes. Translated EMBL DataBank AC D80008.
13. Niederacher, D. and Entian, K.-D. (1991). Characterization of Hex2 protein, a negative regulatory element necessary for glucose repression in yeast. Eur. J. Biochem. 200, 311-319.
14. Owttrim, G. W., Hofmann, S. and Kuhlemeier, C. (1991). Divergent genes for translation initiation factor eIF-4A are coordinately expressed in tobacco. Nucl. Acids Res. 19, 5491-5496.
15. Presutti, C., Lucioli, A. and Bozzoni, I. (1988). Ribosomal protein L2 in Saccharomyces cerevisiae is homologous to ribosomal protein L1 in Xenopus laevis. Isolation and characterization of the genes. J. Biol. Chem. 263, 6188-6192.
16. Servos, J., Haase, E. and Brendel, M. (1993). Gene SNQ2 of Saccharomyces cerevisiae, which confers resistance to 4-nitroquinoline-N-oxide and other chemicals, encodes a 169 kDa protein homologous to ATP-dependent permeases. Mol. Gen. Genet. 236, 214-218.
17. Sharp, P. M. and Li, W.-W. (1987). The codon adaptation index - a measure of directional synonymous codon bias, and its potential applications. Nucl. Acids Res. 15, 1281-1295.
18. Smits, P. H. M., De Haan, M., Maat, C. and Grivell, L. A. (1994). The complete sequence of a 33kb fragment on the right arm of chromosome II from Saccharomyces cerevisiae reveals 16 open reading frames, including ten new open reading frames, five previously identified genes and a homologue of the SCO1 gene. Yeast 10(Suppl. A), S75-S80.
19. Su, X. and Bogorad, L. (1991). A residue substitution in phosphoribulokinase of Synechocystis PCC 6803 renders the mutant light-sensitive. J. Biol. Chem. 266, 23698-23705.
20. Voss, H., Wiemann, S., Wirkner, U., et al. (1992). Automated DNA sequencing system resolving 1,000 bases with fluorescein-15*dATP as internal label. Meth. Mol. Cell. Biol. 3, 153-155.
21. Weinstock, K. GenBank AC T38583.
22. Weygand-Durasevic, I., Johnson-Burke, D. and Soell, D. (1987). Cloning and characterization of the gene coding for cytoplasmic seryl-tRNA synthetase from Saccharomyces cerevisiae. Nucl. Acids Res. 15, 1887-1904.
23. Wiemann, S., Rupp, T., Zimmerman, J., Voss, H., Schwager, C. and Ansorge, W. (1995). Primer design for automated DNA sequencing utilizing T7 DNA polymerase and internal labeling with fluorescein-15-dATP. BioTechniques 18, 688-697.
24. Wilkinson, J. Translated EMBL DataBank AC Z66515.
25. Zimmerman, J., Voss, H., Schwager, C., et al. (1990). A simplified protocol for fast plasmid DNA sequencing. Nucl. Acids Res. 18, 1067.