Raman spectroscopy of the Ff gene V protein and complexes with poly(dA): Nonspecific DNA recognition and binding

Biochemistry

Volumn 35, Issue 29, 1996, Pages 9603-9609

  Benevides, James M ^a   Terwilliger, Thomas C ^b   Vohník, Stanislav ^a   Thomas Jr , George J ^a  

^a UNIVERSITY OF MISSOURI KANSAS CITY   (United States)

^b LOS ALAMOS NATIONAL LABORATORY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA BINDING PROTEIN; POLYADENYLIC ACID; SODIUM CHLORIDE;

ARTICLE; BACTERIOPHAGE; CRYSTAL STRUCTURE; HYDROGEN BOND; NUCLEAR MAGNETIC RESONANCE; PRIORITY JOURNAL; PROTEIN DNA INTERACTION; PROTEIN SECONDARY STRUCTURE; PROTEIN TERTIARY STRUCTURE; RAMAN SPECTROMETRY; STOICHIOMETRY; X RAY ANALYSIS;

AMINO ACID SEQUENCE; CRYSTALLIZATION; DNA, SINGLE-STRANDED; DNA-BINDING PROTEINS; MOLECULAR SEQUENCE DATA; POLY A; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; SPECTRUM ANALYSIS, RAMAN; VIRAL PROTEINS;

BACTERIOPHAGE LAMBDA;

EID: 0029777441     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi952602e     Document Type: Article

References (28)

1. Benevides, J. M., Wang, A. H.-J., van der Marel, G. A., van Boom, J. H., Rich, A., & Thomas, G. J., Jr. (1984) Nucleic Acids Res. 12, 5913-5925.
2. Benevides, J. M., Weiss, M. A., & Thomas, G. J., Jr. (1991a) Biochemistry 30, 4381-4388.
3. Benevides, J. M., Weiss, M. A., & Thomas, G. J., Jr. (1991b) Biochemistry 30, 5955-5963.
4. Benevides, J. M., Tsuboi, M., & Thomas, G. J., Jr. (1993) J. Am. Chem Soc. 115, 5351-5359.
5. Benevides, J. M., Kukolj, G., Autexier, C., Aubrey, K. L., DuBow, M., & Thomas, G. J., Jr. (1994a) Biochemistry 33, 10701-10710.
6. Benevides, J. M., Weiss, M. A., & Thomas, G. J., Jr. (1994b) J. Biol. Chem. 629, 10869-10878.
7. Brayer, G. D., & McPherson (1983) J. Mol. Biol. 169, 565-596.
8. Bulsink, H., Harmsen, B. J. M., & Hilbers, C. W. (1988) Eur. J. Biochem. 176, 597-608.
9. Chen, M. C., & Lord, R. C. (1974) J. Am. Chem. Soc. 96, 4750-4752.
10. Folkers, P. J. M., Nilges, M., Folmer, R. H. A., Konings, R. N. H., & Hilbers, C. W. (1994) J. Mol Biol. 236, 229-246.
11. Guan, Y., Zhang, H., Konings, R. N. H., Hilbers, C. W., Terwilliger, T. C., & Wang, A. H.-J. (1994) Biochemistry 33, 7768-7778.
12. Guan, Y., Zhang, H., & Wang, A. H.-J. (1995) Protein Sci. 4, 187-197.
13. Kansy, J. W., Clack, B. A., & Gray, D. M. (1986) J. Biomol. Struct. Dyn. 3, 1079-1110.
14. Li, H., & Thomas, G. J., Jr. (1991) J. Am. Chem. Soc. 113, 456-462.
15. Li, H., Wurrey, C. J., & Thomas, G. J., Jr. (1992) J. Am. Chem. Soc. 114, 7463-7469.
16. Liang, H., & Terwilliger, T. C. (1991) Biochemistry 30, 2772-2782.
17. Miura, T., & Thomas, G. J., Jr. (1995) in Subcellular Biochemistry, Volume 24, Proteins: Structure, Function, and Engineering (Biswas, B. B., & Roy, S., Eds.) pp 55-99, Plenum Press, New York.
18. Model, P., & Russel, M. (1988) in The Bacteriophages (Calendar, R., Ed.) pp 2099-2107, Plenum, New York.
19. Olah, G. A., Gray, D. M., Gray, C. W., Kergil, D. L., Sosnick, T. R., Mark, B., Vaughan, M. R., & Trewhella, J. (1995) J. Mol. Biol. 249, 576-594.
20. Olsthroon, C. S. M., Bostelaar, L. J., van Boom, J. H., & Altona, C. (1980) Eur. J. Biochem. 112, 95-110.
21. Overman, S. A., & Thomas, G. J., Jr. (1995) Biochemistry 34, 5440-5451.
22. Siamwiza, M. N., Lord, R. C., Chen, M. C., Takamatsu, T., Harada, I., Matsuura, H., & Shimanouchi, T. (1975) Biochemistry 14, 4870-4876.
23. Skinner, M. M., Zhang, H., Leschnitzer, D. H., Guan, Y., Bellamy, H., Sweet, R. M., Gray, C. W., Konings, R. N. H., Wang, A. H.-J., & Terwilliger, T. C. (1994) Proc. Natl Acad. Sci. U.S.A. 91, 2071-2075.
24. Small, E. W., & Peticolas, W. L. (1971) Biopolymers 10, 69-88.
25. Thomas, G. J., Jr., & Benevides, J. M. (1985) Biopolymers 24, 1101-1105.
26. Thomas, G. J., Jr., & Tsuboi, M. (1993) Adv. Biophys. Chem. 3, 1-70.
27. Zaman, G. J. R., Schoenmakers, J. G. G., & Konings, R. N. H. (1990) Eur. J. Biochem. 189, 119-124.
28. Zaman, G. J. R., Smetsers, A., Kaan, A., Schoenmakers, J. G. G., & Konings, R. N. H. (1991) Biochim. Biophys. Acta 1089, 183-192.