Poly(rC) binding protein 2 binds to stem-loop IV of the poliovirus RNA 5′ noncoding region: Identification by automated liquid chromatography-tandem mass spectrometry

Proceedings of the National Academy of Sciences of the United States of America

Volumn 93, Issue 20, 1996, Pages 11115-11120

  Blyn, Lawrence B ^a   Swiderek, Kristine M ^b   Richards, Oliver ^a   Stahl, Douglas C ^b   Semler, Bert L ^a   Ehrenfeld, Ellie ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b CITY OF HOPE NATIONAL MEDICAL CENTER   (United States)

Author keywords

Poliovirus; Poly(rC) binding protein 2; Protein sequence analysis; Translation

Indexed keywords

ARTICLE; HUMAN; HUMAN CELL; LIQUID CHROMATOGRAPHY; MOLECULAR INTERACTION; NUCLEOTIDE METABOLISM; POLIOMYELITIS VIRUS; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN DOMAIN; RNA SPLICING; RNA TRANSLATION; TANDEM MASS SPECTROMETRY; TRANSLATION INITIATION; TRANSLATION REGULATION;

AMINO ACID SEQUENCE; CHROMATOGRAPHY, LIQUID; DNA-BINDING PROTEINS; GENE EXPRESSION REGULATION, VIRAL; HELA CELLS; HETEROGENEOUS-NUCLEAR RIBONUCLEOPROTEINS; HUMANS; MASS SPECTROMETRY; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; POLIOVIRUS; PROTEIN BINDING; PROTEIN BIOSYNTHESIS; RNA, VIRAL; RNA-BINDING PROTEINS; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID; TRANSCRIPTION FACTORS;

ESCHERICHIA COLI; POLIOVIRUS;

EID: 0029763192     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.93.20.11115     Document Type: Article

References (35)

1. Ehrenfeld, E. & Semler, B. L. (1995) in Cap-Independent Translation, ed. Sarnow, P. (Springer, Berlin), pp. 65-84.
2. Harber, J. & Wimmer, E. (1993) in Regulation of Gene Expression in Animal Viruses, eds. Carrasco, L., Sonenherg, N. & Wimmer, E. (Plenum, New York), pp. 189-224.
3. Jackson, R. J., Hunt, S. L., Gibbs, C. L. & Kaminski, A. (1994) Mol. Biol. Rep. 19, 147-159.
4. Ehrenfeld, E. (1996) Translational Control (Cold Spring Harbor Lab. Press, Plainview, NY), pp. 549-573.
5. Stefano, J. E. (1984) Cell 36, 145-154.
6. Meerovitch, K., Pelletier, J. & Sonenberg, N, (1989) Genes Dev. 3, 1026-1034.
7. Meerovitch, K., Svitkin, Y. V., Lee, H. S., Lejbkowicz, F., Kenan, D. J., Chan, E. K., Agol, V. I., Keene, J. D. & Sonenberg, N. (1993) J. Virol. 67, 3798-3807.
8. Patton, J. G., Meyer, S. A., Tempst, P. & Nadal-Ginard, B. (1991) Genes Dev. 5, 1237-1251.
9. Hellen, C. U. T., Witherell, G. W., Schmid, M., Shin, S. H., Pestova, T. V., Gil, A. & Wimmer, E. (1993) Proc. Natl. Acad. Sci. USA 90, 7642-7646.
10. Hellen, C. U. T., Pestova, T. V., Litterst, M. & Wimmer, E. (1994) J. Virol. 68, 941-950.
11. Jang, S. K. & Wimmer, E. (1990) Genes Dev. 4, 1560-1572.
12. Borovjagin, A. V., Evstafieva, A. G., Ugarova, T. Y. & Shatsky, I. N. (1990) FEBS Lett. 261, 237-240.
13. Borman, A., Howell, M. T., Patton, J. G. & Jackson, R. J. (1993) J. Gen. Virol. 74, 1775-1788.
14. Ali, N. & Siddiqui, A. (1995) J. Virol. 69, 6367-6375.
15. Black, A. C., Luo, J., Watanabe, C., Chun, S., Bakker, A., Fraser, J. K., Morgan, J. P. & Rosenblatt, J. D. (1995) J. Virol. 69, 6852-6858.
16. Haller, A. A. & Semler, B. L. (1995) Virology 206, 923-934.
17. Kaminski, A., Hunt, S. L., Patton, J. G. & Jackson, R. J. (1995) RNA 1, 924-938.
18. Borman, A. M., Deliat, F. G. & Kean, K. M. (1994) EMBO J. 13, 3149-3157.
19. Blyn, L. B., Chen, R., Semler, B. L. & Ehrenfeld, E. (1995) J. Virol. 69, 4381-4389.
20. Metspalu, A., Saarma, M., Villems, R., Ustav, M. & Lind, A. (1978) Eur. J. Biochem 91, 73-81.
21. Fahnestock, S. R. & Nomura, M. (1972) Proc. Natl. Acad. Sci. USA 69, 363-365.
22. Dildine, S. L. & Semler, B. L. (1992) J. Virol. 66, 4364-4376.
23. Luban, J. & Goff, S. P. (1991) J. Virol. 65, 3203-3212.
24. Hellman, U., Wernstedt, C., Gonez, J. & Heldin, C. H. (1995) Anal. Biochem. 224, 451-455.
25. Davis, M. T., Stahl, D. C. & Lee, T. D. (1995) J. Am. Soc. Mass Spectrom. 6, 571-577.
26. Davis, M. T., Stahl, D. C., Swiderek, K. M. & Lee, T. D. (1994) in Liquid Chromatography Mass Spectrometry for Peptide and Protein Characterization, ed. Shively, J. E. (Academic, New York), Vol. 6, pp. 304-314.
27. Davis, M. T., Stahl, D. C., Hefta, S. A. & Lee, T. D. (1995) Anal. Chem. 67, 4549-4556.
28. Stahl, D. C., Swiderek, K. M., Davis, M. T. & Lee, T. D. (1996) J. Am. Soc. Mass Spectmm. 7, 532-540.
29. Eng, J. K., McCormack, A. L. & Yates, J. R. I. (1994) J. Am. Soc. Mass Spectrom. 5, 976-989.
30. Leffers, H., Dejgaard, K. & Celis, J. E. (1995) Eur. J. Biochem. 230, 447-453.
31. Simoes, E. A. & Sarnow, P. (1991) J. Virol. 65, 913-921.
32. Aasheim, H. C., Loukianova, T., Deggerdal, A. & Smeland, E. B. (1994) Nucleic Acids Res. 22, 959-964.
33. Wilm, M., Shevchenko, A., Houthaeve, T., Breit, S., Schweigerer, L., Fotsis, T. & Mann, M. (1996) Nature (London) 379, 466-469.
34. Patterson, S. D. & Aebersold, R. (1995) Electrophoresis 16, 1791-1814.
35. Trono, D., Andino, R. & Baltimore, D. (1988) J. Virol. 62, 2291-2299.