-
1
-
-
0024278714
-
Helix geometry in proteins
-
Barlow, D. J., and J. M. Thornton. 1988. Helix geometry in proteins. J. Mol. Biol. 201:601-619.
-
(1988)
J. Mol. Biol.
, vol.201
, pp. 601-619
-
-
Barlow, D.J.1
Thornton, J.M.2
-
2
-
-
0039958360
-
Asymmetric partitioning of a polymer into a curved membrane
-
Baumgärtner, A. 1995. Asymmetric partitioning of a polymer into a curved membrane. J. Chem. Phys. 103:10669-10674.
-
(1995)
J. Chem. Phys.
, vol.103
, pp. 10669-10674
-
-
Baumgärtner, A.1
-
3
-
-
0000746588
-
Spontaneous translocation of a polymer across a curved membrane
-
Baumgärtner, A., and J. Skolnick. 1995. Spontaneous translocation of a polymer across a curved membrane. Phys. Rev. Lett. 74:2142-2145.
-
(1995)
Phys. Rev. Lett.
, vol.74
, pp. 2142-2145
-
-
Baumgärtner, A.1
Skolnick, J.2
-
4
-
-
0026808783
-
Peptide binding to lipid bilayer. Nonclassical Hydrophobic effect and membrane-induced pK shifts
-
Beschiaschvili, G., and J. Seelig. 1992. Peptide binding to lipid bilayer. Nonclassical Hydrophobic effect and membrane-induced pK shifts. Biochemistry. 31:10044-10053.
-
(1992)
Biochemistry
, vol.31
, pp. 10044-10053
-
-
Beschiaschvili, G.1
Seelig, J.2
-
6
-
-
84986512474
-
CHARMM: A program for macromolecular energy, minimization, and dynamics calculations
-
Brooks, B. R., R. E. Bruccoleri, B. D. Olafson, D. J. States, S. Swaminathan, and M. Karplus. 1983. CHARMM: a program for macromolecular energy, minimization, and dynamics calculations. J. Comput. Chem. 4:187-217.
-
(1983)
J. Comput. Chem.
, vol.4
, pp. 187-217
-
-
Brooks, B.R.1
Bruccoleri, R.E.2
Olafson, B.D.3
States, D.J.4
Swaminathan, S.5
Karplus, M.6
-
7
-
-
0001282854
-
Mechanical properties of nematic polymers
-
A. Ciferri, W. R. Krigbaum, and R. B. Meyer, editors. Academic Press, New York
-
de Gennes, P. G. 1982. Mechanical properties of nematic polymers. In Polymer Liquid Crystals. A. Ciferri, W. R. Krigbaum, and R. B. Meyer, editors. Academic Press, New York.
-
(1982)
Polymer Liquid Crystals
-
-
De Gennes, P.G.1
-
8
-
-
0025217893
-
The actions of melittin on membranes
-
Dempsey, C. E. 1990. The actions of melittin on membranes. Biochim. Biophys. Acta. 1031:143-161.
-
(1990)
Biochim. Biophys. Acta
, vol.1031
, pp. 143-161
-
-
Dempsey, C.E.1
-
9
-
-
0021152462
-
Three-dimensional structure of membrane and surface proteins
-
Eisenberg, D. 1984. Three-dimensional structure of membrane and surface proteins. Annu. Rev. Biochem. 53:595-623.
-
(1984)
Annu. Rev. Biochem.
, vol.53
, pp. 595-623
-
-
Eisenberg, D.1
-
10
-
-
0019464222
-
The spontaneous insertion of proteins into and across membranes: The helical hairpin hypothesis
-
Engelman, D. M., and T. A. Steitz. 1981. The spontaneous insertion of proteins into and across membranes: the helical hairpin hypothesis. Cell. 23:411-422.
-
(1981)
Cell
, vol.23
, pp. 411-422
-
-
Engelman, D.M.1
Steitz, T.A.2
-
11
-
-
0022510143
-
Identifying non-polar transbilayer helices in amino acid sequences of membrane proteins
-
Engelman, D. M., T. A. Steitz, and A. Goldman. 1986. Identifying non-polar transbilayer helices in amino acid sequences of membrane proteins. Annu. Rev. Biophys. Biophys. Chem, 15:321-353.
-
(1986)
Annu. Rev. Biophys. Biophys. Chem.
, vol.15
, pp. 321-353
-
-
Engelman, D.M.1
Steitz, T.A.2
Goldman, A.3
-
13
-
-
0002003326
-
Molecular theory of liquid crystals
-
Flory, P. J. 1984. Molecular theory of liquid crystals. Adv. Polym. Sci. 59:1-36.
-
(1984)
Adv. Polym. Sci.
, vol.59
, pp. 1-36
-
-
Flory, P.J.1
-
15
-
-
0024963567
-
Signal sequences
-
Gierasch, L. M. 1989. Signal sequences. Biochemistry. 28:923-930.
-
(1989)
Biochemistry
, vol.28
, pp. 923-930
-
-
Gierasch, L.M.1
-
16
-
-
0025269891
-
Novel method for the rapid evaluation of packing in protein structures
-
Gregoret, L. M., and F. E. Cohen. 1990. Novel method for the rapid evaluation of packing in protein structures. J. Mol. Biol. 211:959-974.
-
(1990)
J. Mol. Biol.
, vol.211
, pp. 959-974
-
-
Gregoret, L.M.1
Cohen, F.E.2
-
17
-
-
0024558250
-
The nature of the Hydrophobic binding of small peptides at a bilayer interface: Implications for the insertion of transbilayer helices
-
Jacobs, R. E., and S. H. White. 1989. The nature of the Hydrophobic binding of small peptides at a bilayer interface: implications for the insertion of transbilayer helices. Biochemistry. 28:3421-3437.
-
(1989)
Biochemistry
, vol.28
, pp. 3421-3437
-
-
Jacobs, R.E.1
White, S.H.2
-
18
-
-
0020772556
-
Thermodynamics and kinetics of protein incorporation into membranes
-
Jähnig, F. 1983. Thermodynamics and kinetics of protein incorporation into membranes. Proc. Natl. Acad. Sci. USA. 80:3691-3695.
-
(1983)
Proc. Natl. Acad. Sci. USA
, vol.80
, pp. 3691-3695
-
-
Jähnig, F.1
-
19
-
-
0026761782
-
Modeling the structure of bacteriorhodopsin. A molecular dynamics study
-
Jähnig, F., and O. Edholm. 1992. Modeling the structure of bacteriorhodopsin. A molecular dynamics study. J. Mol. Biol. 226:837-850.
-
(1992)
J. Mol. Biol.
, vol.226
, pp. 837-850
-
-
Jähnig, F.1
Edholm, O.2
-
20
-
-
0025196904
-
Tryptophan fluorescence study on the interaction of a signal peptide of the Escherichia coli outer membrane protein PhoE with model membranes
-
Kilian, J. A., R. C. Keller, M. Struyve, A. de Kroon, J. Tommassen, and B. de Knuiff. 1990. Tryptophan fluorescence study on the interaction of a signal peptide of the Escherichia coli outer membrane protein PhoE with model membranes. Biochemistry. 29:8131-8137.
-
(1990)
Biochemistry
, vol.29
, pp. 8131-8137
-
-
Kilian, J.A.1
Keller, R.C.2
Struyve, M.3
De Kroon, A.4
Tommassen, J.5
De Knuiff, B.6
-
21
-
-
0025697080
-
Bacteriophages M13 and Pf3 tells us how proteins insert into the membrane
-
Kuhn, A., J. Rohrer, and A. Gallusser. 1990. Bacteriophages M13 and Pf3 tells us how proteins insert into the membrane. J. Struct. Biol. 104: 38-43.
-
(1990)
J. Struct. Biol.
, vol.104
, pp. 38-43
-
-
Kuhn, A.1
Rohrer, J.2
Gallusser, A.3
-
22
-
-
9144240095
-
DREIDING: A generic force field for molecular simulations
-
Mayo, S. L., B. D. Olafson, and W. A. Goddard. 1990. DREIDING: a generic force field for molecular simulations. J. Phys. Chem. 94: 8897-8909.
-
(1990)
J. Phys. Chem.
, vol.94
, pp. 8897-8909
-
-
Mayo, S.L.1
Olafson, B.D.2
Goddard, W.A.3
-
23
-
-
0025788661
-
Fluorescence analysis of tryptophan-containing variants of the LamB signal sequence upon insertion into a lipid bilayer
-
McKnight, C. J., M. Rafalski, and L. M. Gierasch. 1991. Fluorescence analysis of tryptophan-containing variants of the LamB signal sequence upon insertion into a lipid bilayer. Biochemistry. 30:6241-6246.
-
(1991)
Biochemistry
, vol.30
, pp. 6241-6246
-
-
McKnight, C.J.1
Rafalski, M.2
Gierasch, L.M.3
-
24
-
-
0027390459
-
Insertion of peptide chains into lipid membranes: An off-lattice Monte Carlo dynamics model
-
Milik, M., and J. Skolnick. 1993. Insertion of peptide chains into lipid membranes: an off-lattice Monte Carlo dynamics model. Proteins Struct. Funct. Genet. 15:10-25.
-
(1993)
Proteins Struct. Funct. Genet.
, vol.15
, pp. 10-25
-
-
Milik, M.1
Skolnick, J.2
-
25
-
-
0029099311
-
A Monte Carlo model of fd and Pf1 proteins in lipid membranes
-
Milik, M., and J. Skolnick. 1995. A Monte Carlo model of fd and Pf1 proteins in lipid membranes. Biophys. J. 69:1382-1386.
-
(1995)
Biophys. J.
, vol.69
, pp. 1382-1386
-
-
Milik, M.1
Skolnick, J.2
-
26
-
-
0013862409
-
Dimension of polypeptide chains in heliogenic solvents
-
Miller, W. G., and P. J. Flory. 1966. Dimension of polypeptide chains in heliogenic solvents. J. Mol. Biol. 15:298-314.
-
(1966)
J. Mol. Biol.
, vol.15
, pp. 298-314
-
-
Miller, W.G.1
Flory, P.J.2
-
27
-
-
84971301149
-
The effects of shape on the interaction of colloidal particles
-
Onsager, L. 1949. The effects of shape on the interaction of colloidal particles. Ann. N.Y. Acad. Sci. 51:627-659.
-
(1949)
Ann. N.Y. Acad. Sci.
, vol.51
, pp. 627-659
-
-
Onsager, L.1
-
28
-
-
0025249842
-
Membrane protein folding and oligomerization: The two-stage model
-
Popot, J. P., and D. M. Engelman. 1990. Membrane protein folding and oligomerization: the two-stage model. Biochemistry. 29:4031-4037.
-
(1990)
Biochemistry
, vol.29
, pp. 4031-4037
-
-
Popot, J.P.1
Engelman, D.M.2
-
29
-
-
0001913674
-
Folding and assembly of integral membrane protein
-
S. H. White, editor. Oxford University Press, New York
-
Popot, J. P., C. Vitry, and A. Atteia. 1994. Folding and assembly of integral membrane protein. In Membrane Protein Structure. S. H. White, editor. Oxford University Press, New York. 41-96.
-
(1994)
Membrane Protein Structure
, pp. 41-96
-
-
Popot, J.P.1
Vitry, C.2
Atteia, A.3
-
30
-
-
0026471714
-
Transport of proteins across the endoplasmatic reticulum membrane
-
Rapoport, T. A. 1992. Transport of proteins across the endoplasmatic reticulum membrane. Science. 258:932-936.
-
(1992)
Science
, vol.258
, pp. 932-936
-
-
Rapoport, T.A.1
-
31
-
-
0024278357
-
Hydrophilicity of polar amino acid side-chains is markedly reduced by flanking peptide bonds
-
Roseman, M. A. 1988. Hydrophilicity of polar amino acid side-chains is markedly reduced by flanking peptide bonds. J. Mol. Biol. 200:513-522.
-
(1988)
J. Mol. Biol.
, vol.200
, pp. 513-522
-
-
Roseman, M.A.1
-
32
-
-
0026058626
-
Conformation and aggregation of M13 coat protein studied by molecular dynamics
-
Sanders, J. C., N. van Nuland, O. Edholm, and M. A. Hemminga. 1991. Conformation and aggregation of M13 coat protein studied by molecular dynamics. Biophys. Chem. 41:193-202.
-
(1991)
Biophys. Chem.
, vol.41
, pp. 193-202
-
-
Sanders, J.C.1
Van Nuland, N.2
Edholm, O.3
Hemminga, M.A.4
-
33
-
-
0025996974
-
Nonclassical Hydrophobic effect in membrane binding equilibria
-
Seelig, J., and P. Ganz. 1991. Nonclassical Hydrophobic effect in membrane binding equilibria, Biochemistry. 30:9354-9359.
-
(1991)
Biochemistry
, vol.30
, pp. 9354-9359
-
-
Seelig, J.1
Ganz, P.2
-
34
-
-
0025224551
-
The structure and insertion of integral proteins in membranes
-
Singer, S. J. 1990. The structure and insertion of integral proteins in membranes. Annu. Rev. Cell. Biol. 6:247-296.
-
(1990)
Annu. Rev. Cell. Biol.
, vol.6
, pp. 247-296
-
-
Singer, S.J.1
-
35
-
-
0028200975
-
Helix folding simulations with various initial conformations
-
Sung, S.-S. 1994. Helix folding simulations with various initial conformations. Biophys. J. 66:1796-1803.
-
(1994)
Biophys. J.
, vol.66
, pp. 1796-1803
-
-
Sung, S.-S.1
-
36
-
-
0028952952
-
Folding simulations of Alanine-based peptides with lysine residues
-
Sung, S.-S. 1995. Folding simulations of Alanine-based peptides with lysine residues. Biophys. J. 68:826-834.
-
(1995)
Biophys. J.
, vol.68
, pp. 826-834
-
-
Sung, S.-S.1
-
37
-
-
0000525633
-
Effects of constraints on the dynamics of macromolecules
-
van Gunsteren, W. F., and M. Karplus. 1982. Effects of constraints on the dynamics of macromolecules. Macromolecules. 15:1528-1544.
-
(1982)
Macromolecules
, vol.15
, pp. 1528-1544
-
-
Van Gunsteren, W.F.1
Karplus, M.2
-
38
-
-
0025782832
-
Proline kinks in transmembrane a-helices
-
von Heijne, G. 1991. Proline kinks in transmembrane a-helices. J. Mol. Biol. 218:499-503.
-
(1991)
J. Mol. Biol.
, vol.218
, pp. 499-503
-
-
Von Heijne, G.1
-
39
-
-
0028304680
-
Membrane proteins: From sequence to structure
-
von Heijne, G. 1994a. Membrane proteins: from sequence to structure. Annu. Rev. Biophys. Biomol. Struct. 23:167-192.
-
(1994)
Annu. Rev. Biophys. Biomol. Struct.
, vol.23
, pp. 167-192
-
-
Von Heijne, G.1
-
40
-
-
0028235052
-
Sec-independent protein insertion into the inner E. coli membrane: A phenomenon in search of an explanation
-
von Heijne, G. 1994b. Sec-independent protein insertion into the inner E. coli membrane: a phenomenon in search of an explanation. FEBS Lett. 346:69-72.
-
(1994)
FEBS Lett.
, vol.346
, pp. 69-72
-
-
Von Heijne, G.1
-
41
-
-
0018485028
-
Trans-membrane translocation of proteins. The direct transfer model
-
von Heijne, G., and C. Blomberg. 1979. Trans-membrane translocation of proteins. The direct transfer model. Eur. J. Biochem. 97:175-181.
-
(1979)
Eur. J. Biochem.
, vol.97
, pp. 175-181
-
-
Von Heijne, G.1
Blomberg, C.2
-
42
-
-
0028170807
-
Signal sequence recognition and protein targeting to the endoplasmatic reticulum membrane
-
Walter, P., and A. E. Johnson. 1994. Signal sequence recognition and protein targeting to the endoplasmatic reticulum membrane. Annu. Rev. Cell. Biol. 10:87-119.
-
(1994)
Annu. Rev. Cell. Biol.
, vol.10
, pp. 87-119
-
-
Walter, P.1
Johnson, A.E.2
-
44
-
-
0000391729
-
Hydropathy plots and the prediction of membrane protein topology
-
S. H. White, editor. Oxford University Press, New York
-
White, S. H. 1994. Hydropathy plots and the prediction of membrane protein topology. In Membrane Protein Structure. S. H. White, editor. Oxford University Press, New York. 97-124.
-
(1994)
Membrane Protein Structure
, pp. 97-124
-
-
White, S.H.1
-
45
-
-
0028013531
-
Peptides in bilayers: Structural and thermodynamic basis for partitioning and folding
-
White, S. H., and W. C. Wimley. 1994. Peptides in bilayers: structural and thermodynamic basis for partitioning and folding. Curr. Opin. Struct. Biol. 4:79-86.
-
(1994)
Curr. Opin. Struct. Biol.
, vol.4
, pp. 79-86
-
-
White, S.H.1
Wimley, W.C.2
-
46
-
-
0018336744
-
Assembly of proteins into membranes: The membrane trigger hypothesis
-
Wickner, W. T. 1979. Assembly of proteins into membranes: the membrane trigger hypothesis. Annu. Rev. Biochem. 48:23-45.
-
(1979)
Annu. Rev. Biochem.
, vol.48
, pp. 23-45
-
-
Wickner, W.T.1
-
47
-
-
0027994841
-
How ATP drives proteins across membranes
-
Wickner, W. T. 1994. How ATP drives proteins across membranes. Science. 266:1197-1198.
-
(1994)
Science
, vol.266
, pp. 1197-1198
-
-
Wickner, W.T.1
|