메뉴 건너뛰기




Volumn 21, Issue 1, 1996, Pages 45-62

Phylogenetic relationships among the sections of Clarkia(Onagraceae) inferred from the nucleotide sequences of PgiC

Author keywords

[No Author keywords available]

Indexed keywords

CLARKIA; CLARKIA MILDREDIAE; CLARKIA ROSTRATA; GODETIA; OENOTHERA MEXICANA; ONAGRACEAE; PRIMULA; ROSTRATA;

EID: 0029759308     PISSN: 03636445     EISSN: None     Source Type: Journal    
DOI: 10.2307/2419562     Document Type: Article
Times cited : (64)

References (42)
  • 1
    • 0025259663 scopus 로고
    • Improvement of PCR amplified DNA sequencing with the aid of detergents
    • BACHMAMN, B., W. LUKE, and G. HUNSMANN. 1990. Improvement of PCR amplified DNA sequencing with the aid of detergents. Nucleic Acids Research 18: 1309.
    • (1990) Nucleic Acids Research , vol.18 , pp. 1309
    • Bachmamn, B.1    Luke, W.2    Hunsmann, G.3
  • 2
    • 0027546519 scopus 로고
    • A more robust, rapid alkaline denaturation sequencing method
    • BARKER, D. F. 1993. A more robust, rapid alkaline denaturation sequencing method. Bio Techniques 14: 168-169.
    • (1993) Bio Techniques , vol.14 , pp. 168-169
    • Barker, D.F.1
  • 3
    • 0023055381 scopus 로고
    • A catalog of splice junction and putative branch point sequences from plant introns
    • BROWN, J. W. S. 1986. A catalog of splice junction and putative branch point sequences from plant introns. Nucleic Acids Research 14: 9549-9559.
    • (1986) Nucleic Acids Research , vol.14 , pp. 9549-9559
    • Brown, J.W.S.1
  • 5
    • 0001641598 scopus 로고
    • Confidence limits on phytogenies with a molecular clock
    • FELSENSTEIN, J. 1985. Confidence limits on phytogenies with a molecular clock. Systematic Zoology 34: 152-161.
    • (1985) Systematic Zoology , vol.34 , pp. 152-161
    • Felsenstein, J.1
  • 6
    • 0003437299 scopus 로고
    • Distributed by the author. Department of Genetics, University of Washington, Seattle
    • _. 1993. PHYLIP (Phylogeny Inference Package) version 3.5c. Distributed by the author. Department of Genetics, University of Washington, Seattle.
    • (1993) PHYLIP (Phylogeny Inference Package) Version 3.5c
  • 7
    • 0028854829 scopus 로고
    • The same duplication accounts for the PgiC genes in Clarkia xantiana and C. lewisii (Onagraceae)
    • FORD, V. S., B. R. THOMAS, and L. D. GOTTLIEB. 1995. The same duplication accounts for the PgiC genes in Clarkia xantiana and C. lewisii (Onagraceae). Systematic Botany 20: 147-160.
    • (1995) Systematic Botany , vol.20 , pp. 147-160
    • Ford, V.S.1    Thomas, B.R.2    Gottlieb, L.D.3
  • 9
    • 0017399079 scopus 로고
    • Evidence for duplication and divergence of the structural gene for phosphoglucose isomerase in diploid species of Clarkia
    • GOTTLIEB, L. D. 1977. Evidence for duplication and divergence of the structural gene for phosphoglucose isomerase in diploid species of Clarkia. Genetics 86: 289-307.
    • (1977) Genetics , vol.86 , pp. 289-307
    • Gottlieb, L.D.1
  • 10
    • 9544236093 scopus 로고
    • Evidence from subunit molecular weight suggests hybridization was the source of the phosphoglucose isomerase gene duplication in Clarkia
    • _ and R. C. HIGGINS. 1984. Evidence from subunit molecular weight suggests hybridization was the source of the phosphoglucose isomerase gene duplication in Clarkia. Theoretical and Applied Genetics 68: 369-373.
    • (1984) Theoretical and Applied Genetics , vol.68 , pp. 369-373
    • Higgins, R.C.1
  • 11
    • 0000786502 scopus 로고
    • Gene duplication and phytogeny in Clarkia
    • _ and N. F. WEEDEN. 1979 Gene duplication and phytogeny in Clarkia. Evolution 33: 1024-1039.
    • (1979) Evolution , vol.33 , pp. 1024-1039
    • Weeden, N.F.1
  • 12
    • 12044254100 scopus 로고
    • The effect of irrelevant characters on bootstrap values
    • HARSHMAN, J. 1994. The effect of irrelevant characters on bootstrap values. Systematic Biology 43: 419-424.
    • (1994) Systematic Biology , vol.43 , pp. 419-424
    • Harshman, J.1
  • 13
    • 0001828817 scopus 로고
    • Stigma form and surface in relation to self-incompatibility in the Onagraceae
    • HESLOP-HARRISON, Y. 1990. Stigma form and surface in relation to self-incompatibility in the Onagraceae. Nordic Journal of Botany 10: 1-19.
    • (1990) Nordic Journal of Botany , vol.10 , pp. 1-19
    • Heslop-Harrison, Y.1
  • 14
    • 0024598146 scopus 로고
    • Fast and sensitive multiple sequence alignments on a microcomputer
    • HIGGINS, D. G. and P. M. SHARP. 1989. Fast and sensitive multiple sequence alignments on a microcomputer. CABIOS 5: 151-153.
    • (1989) CABIOS , vol.5 , pp. 151-153
    • Higgins, D.G.1    Sharp, P.M.2
  • 15
    • 0021751540 scopus 로고
    • Subunit hybridization and immunological studies of duplicated phosphoglucose isomerase isozymes
    • HIGGINS, R. C. and L. D. GOTTLIEB. 1984. Subunit hybridization and immunological studies of duplicated phosphoglucose isomerase isozymes. Biochemical Genetics 22: 957-979.
    • (1984) Biochemical Genetics , vol.22 , pp. 957-979
    • Higgins, R.C.1    Gottlieb, L.D.2
  • 16
    • 0003127271 scopus 로고
    • A cladistic analysis of the plant family Onagraceae
    • HOCH, P. C., J. V. CRJSCI, H. TOBE, and P. E. BERRY. 1993. A cladistic analysis of the plant family Onagraceae. Systematic Botany 18: 31-47.
    • (1993) Systematic Botany , vol.18 , pp. 31-47
    • Hoch, P.C.1    Crjsci, J.V.2    Tobe, H.3    Berry, P.E.4
  • 17
    • 0842284877 scopus 로고
    • Taxonomic and nomenclatural notes on Clarkia sect. Phaeostoma Lewis & Lewis (Onagraceae)
    • HOLSINGER, K. E. 1985. Taxonomic and nomenclatural notes on Clarkia sect. Phaeostoma Lewis & Lewis (Onagraceae). Taxon 34: 704-706.
    • (1985) Taxon , vol.34 , pp. 704-706
    • Holsinger, K.E.1
  • 18
    • 0346733019 scopus 로고
    • Enzyme activity in EMS-induced null mutations of duplicated genes encoding phosphoglucose isomerases in Clarkia
    • JONES, T. W. A., E. PICHERSKY, and L. D. GOTTLIEB. 1986. Enzyme activity in EMS-induced null mutations of duplicated genes encoding phosphoglucose isomerases in Clarkia. Genetics 113: 101-114.
    • (1986) Genetics , vol.113 , pp. 101-114
    • Jones, T.W.A.1    Pichersky, E.2    Gottlieb, L.D.3
  • 19
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • KIMURA, M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution 16: 111-120.
    • (1980) Journal of Molecular Evolution , vol.16 , pp. 111-120
    • Kimura, M.1
  • 20
    • 0001658949 scopus 로고
    • The origin of diploid neospecies in Clarkia
    • LEWIS, H. 1973. The origin of diploid neospecies in Clarkia. American Naturalist 107: 161-170.
    • (1973) American Naturalist , vol.107 , pp. 161-170
    • Lewis, H.1
  • 22
    • 9544247621 scopus 로고
    • Clarkia
    • ed. J. C. Hickman. Berkeley: Univ. of California Press
    • _. 1993. Clarkia. Pp. 786-793 in Thejepson manual, ed. J. C. Hickman. Berkeley: Univ. of California Press.
    • (1993) Thejepson Manual , pp. 786-793
  • 23
    • 0001391795 scopus 로고
    • University of California Publications in Botany
    • _. and M. E. LEWIS. 1955. The genus Clarkia. University of California Publications in Botany 20: 241-392.
    • (1955) The Genus Clarkia , vol.20 , pp. 241-392
    • Lewis, M.E.1
  • 24
    • 0007444578 scopus 로고
    • New combinations in the genus Clarkia (Onagraceae)
    • _ and P. H. RAVEN. 1992. New combinations in the genus Clarkia (Onagraceae). Madron̄̄o 39: 163-169.
    • (1992) Madron̄̄o , vol.39 , pp. 163-169
    • Raven, P.H.1
  • 25
    • 0027403961 scopus 로고
    • Unbiased estimation of the rates of synonymous and nonsynonymous substitution
    • Li, W-H. 1993. Unbiased estimation of the rates of synonymous and nonsynonymous substitution. Journal of Molecular Evolution 36: 96-99.
    • (1993) Journal of Molecular Evolution , vol.36 , pp. 96-99
    • Li, W.-H.1
  • 26
    • 0022005270 scopus 로고
    • A new method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes
    • _, C-I. Wu, and C-C. Luo. 1985. A new method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes. Molecular Biology and Evolution 2: 150-174,
    • (1985) Molecular Biology and Evolution , vol.2 , pp. 150-174
    • Wu, C.-I.1    Luo, C.-C.2
  • 27
    • 0026428610 scopus 로고
    • Adaptive protein evolution at the Adh locus in Drosophila
    • MCDONALD, J. H. and M. KREITMAN. 1991. Adaptive protein evolution at the Adh locus in Drosophila. Nature 351: 652-654.
    • (1991) Nature , vol.351 , pp. 652-654
    • Mcdonald, J.H.1    Kreitman, M.2
  • 28
    • 0019522295 scopus 로고
    • Rapidly evolving mouse alpha-globin related pseudogene and its evolutionary history
    • MIYATA, T. and T. YASUNAGA. 1981. Rapidly evolving mouse alpha-globin related pseudogene and its evolutionary history. Proceedings of the National Academy of Sciences, U.S.A. 78: 450-453.
    • (1981) Proceedings of the National Academy of Sciences, U.S.A. , vol.78 , pp. 450-453
    • Miyata, T.1    Yasunaga, T.2
  • 29
    • 0019302686 scopus 로고
    • Pseudogenes
    • PROUDFOOT, N. 1980. Pseudogenes. Nature 286: 840-841.
    • (1980) Nature , vol.286 , pp. 840-841
    • Proudfoot, N.1
  • 30
    • 0010767166 scopus 로고
    • The generic subdivision of Onagraceae, tribe Onagreae
    • RAVEN, P. H. 1964. The generic subdivision of Onagraceae, tribe Onagreae. Bnttonia 16: 276-288.
    • (1964) Bnttonia , vol.16 , pp. 276-288
    • Raven, P.H.1
  • 31
    • 0242489197 scopus 로고
    • Onagraceae as a model of plant evolution
    • eds. L. D. Gottlieb and S. K. Jain. London: Chapman and Hall
    • _. 1988. Onagraceae as a model of plant evolution. Pp. 85-107 in Plant evolutionary biology, eds. L. D. Gottlieb and S. K. Jain. London: Chapman and Hall.
    • (1988) Plant Evolutionary Biology , pp. 85-107
  • 32
    • 0000015840 scopus 로고
    • Preparation of genomic DNA from plant tissue
    • ed. F. M. Ausubel. New York: John Wiley and Sons
    • RICHARDS, E., M. REICHARDT, and S. ROGERS. 1994. Preparation of genomic DNA from plant tissue. Pp. 2.3.1-2.3.7 in Current protocols in molecular biology Vol. l, ed. F. M. Ausubel. New York: John Wiley and Sons.
    • (1994) Current Protocols in Molecular Biology , vol.50 , pp. 231-237
    • Richards, E.1    Reichardt, M.2    Rogers, S.3
  • 33
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • SAFTOU, N. and M. NEI. 1987, The neighbor-joining method: A new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 4: 406-425.
    • (1987) Molecular Biology and Evolution , vol.4 , pp. 406-425
    • Saftou, N.1    Nei, M.2
  • 34
    • 0000353522 scopus 로고
    • Chloroplast DNA evidence for the origin of the genus Heterogaura from a species of Clarkia (Onagraceae)
    • SYTSMA, K. J. and L. D. GOTTLIEB. 1986. Chloroplast DNA evidence for the origin of the genus Heterogaura from a species of Clarkia (Onagraceae). Proceedings of the National Academy of Sciences, U.S.A. 83: 5554-5557.
    • (1986) Proceedings of the National Academy of Sciences, U.S.A. , vol.83 , pp. 5554-5557
    • Sytsma, K.J.1    Gottlieb, L.D.2
  • 35
    • 0007404409 scopus 로고
    • Phylogenetics in Clarkia (Onagraceae): Restriction mapping of chloroplast DNA
    • _, J. F. SMITH, and L. D. GOTTLIEB. 1990. Phylogenetics in Clarkia (Onagraceae): Restriction mapping of chloroplast DNA. Systematic Botany 15: 280-295.
    • (1990) Systematic Botany , vol.15 , pp. 280-295
    • Smith, J.F.1    Gottlieb, L.D.2
  • 36
    • 0027524758 scopus 로고
    • Molecular characterization of duplicate cytosolic phosphoglucose isomerase genes in Clarkia and comparison to the single gene in Arabidopsis
    • THOMAS, B. R., V. S. FORD, E. PICHERSKY, and L. D. GOTTLIEB. 1993. Molecular characterization of duplicate cytosolic phosphoglucose isomerase genes in Clarkia and comparison to the single gene in Arabidopsis. Genetics 135: 895-905.
    • (1993) Genetics , vol.135 , pp. 895-905
    • Thomas, B.R.1    Ford, V.S.2    Pichersky, E.3    Gottlieb, L.D.4
  • 37
    • 0026905927 scopus 로고
    • Molecular analysis of the plant gene encoding cytosolic phosphoglucose isomerase
    • _, D. LAUDENCIA-CHINGCUANCO, and L. D. GOTTLIEB. 1992. Molecular analysis of the plant gene encoding cytosolic phosphoglucose isomerase. Plant Molecular Biology 19: 745-757.
    • (1992) Plant Molecular Biology , vol.19 , pp. 745-757
    • Laudencia-Chingcuanco, D.1    Gottlieb, L.D.2
  • 38
    • 0038175668 scopus 로고
    • Evolution of polysporangiate anthers in Onagraceae
    • TOBE, H. and P. H. RAVEN. 1986. Evolution of polysporangiate anthers in Onagraceae. American Journal of Botany 73: 475-488.
    • (1986) American Journal of Botany , vol.73 , pp. 475-488
    • Tobe, H.1    Raven, P.H.2
  • 39
    • 0018410494 scopus 로고
    • Distinguishing allozymes and isozymes of phosphoglucose isomerases by electrophoretic comparison of pollen and somatic tissues
    • WEEDEN, N. F. and L. D. GOTTLIEB. 1979. Distinguishing allozymes and isozymes of phosphoglucose isomerases by electrophoretic comparison of pollen and somatic tissues. Biochemical Genetics 17: 287-296.
    • (1979) Biochemical Genetics , vol.17 , pp. 287-296
    • Weeden, N.F.1    Gottlieb, L.D.2
  • 40
    • 0042830162 scopus 로고
    • Dissociation, reassociation and purification of plastid and cytosolic phosphoglucose isomerase isozymes
    • _ and _. 1982. Dissociation, reassociation and purification of plastid and cytosolic phosphoglucose isomerase isozymes. Plant Physiology 69: 717-723.
    • (1982) Plant Physiology , vol.69 , pp. 717-723
  • 41
    • 0026641601 scopus 로고
    • The evolution of duplicate glyceraldehyde-3-phosphate dehydrogenase genes in Drosophila
    • WOJTAS, K. M., L. VON KALM, J. R. WEAVER, and D. T. SULLIVAN. 1992. The evolution of duplicate glyceraldehyde-3-phosphate dehydrogenase genes in Drosophila. Genetics 132: 789-797.
    • (1992) Genetics , vol.132 , pp. 789-797
    • Wojtas, K.M.1    Von Kalm, L.2    Weaver, J.R.3    Sullivan, D.T.4
  • 42


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.