메뉴 건너뛰기




Volumn 71, Issue 3, 1996, Pages 1215-1221

Crystal structure of the self-complementary 5'-purine start decamer d(GCGCGCGCGC) in the Z-DNA conformation. I

Author keywords

[No Author keywords available]

Indexed keywords

DOUBLE STRANDED DNA; PURINE;

EID: 0029758132     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(96)79350-5     Document Type: Article
Times cited : (34)

References (29)
  • 3
    • 0027096732 scopus 로고
    • Crystal and molecular structure of the alternating dodecamer d(GCGTACGTACGC) in the A-DNA form: Comparison with the isomorphous non-alternating dodecamer d(CCGTACGT ACGG)
    • Bingman, C., S. Jain, G. Zon, and M. Sundaralingam. 1992a. Crystal and molecular structure of the alternating dodecamer d(GCGTACGTACGC) in the A-DNA form: comparison with the isomorphous non-alternating dodecamer d(CCGTACGT ACGG). Nucleic Acids Res. 20:6637-6647.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 6637-6647
    • Bingman, C.1    Jain, S.2    Zon, G.3    Sundaralingam, M.4
  • 4
    • 0027048948 scopus 로고
    • Crystal and molecular structure of d(GTGCGCAC): Investigation of the effects of base sequence on the conformation of octamer duplexes
    • Bingman, C., X. Li, G. Zon, and M. Sundaralingam. 1992b. Crystal and molecular structure of d(GTGCGCAC): investigation of the effects of base sequence on the conformation of octamer duplexes. Biochemistry. 31:12,803-12,812.
    • (1992) Biochemistry , vol.31 , pp. 12803-12812
    • Bingman, C.1    Li, X.2    Zon, G.3    Sundaralingam, M.4
  • 7
    • 0023053306 scopus 로고
    • Salvation of the left-handed hexamer d(5BrC-G-5BrC-G-SBrC-G) in crystals grown at two temperatures
    • Chevrier, B., A. C. Dock, B. Hartmann, M. Leng, D. Moras, M. T. Thuong, and E. Westhof. 1986. Salvation of the left-handed hexamer d(5BrC-G-5BrC-G-SBrC-G) in crystals grown at two temperatures. J. Mol. Biol. 188:707-719.
    • (1986) J. Mol. Biol. , vol.188 , pp. 707-719
    • Chevrier, B.1    Dock, A.C.2    Hartmann, B.3    Leng, M.4    Moras, D.5    Thuong, M.T.6    Westhof, E.7
  • 10
    • 0023054147 scopus 로고
    • Chiral phosphorothioate analogues of B-DNA: The crystal structure of Rp-d(Gp(S)CpGp(S)CpGp(S)C)
    • Cruse, W. B. T., S. A. Salisbury, T. Brown, R. Cosstick, F. Eckstein, and O. Kennard. 1986. Chiral phosphorothioate analogues of B-DNA: the crystal structure of Rp-d(Gp(S)CpGp(S)CpGp(S)C). J. Mol. Biol. 192: 891-905.
    • (1986) J. Mol. Biol. , vol.192 , pp. 891-905
    • Cruse, W.B.T.1    Salisbury, S.A.2    Brown, T.3    Cosstick, R.4    Eckstein, F.5    Kennard, O.6
  • 11
    • 0019318942 scopus 로고
    • High-salt d(CpGpCpG), a left-handed Z' DNA double helix
    • Drew, H., T. Takano, K. Itakura, and R. E. Dickerson. 1980. High-salt d(CpGpCpG), a left-handed Z' DNA double helix. Nature (Lond.). 286:567-573.
    • (1980) Nature (Lond.) , vol.286 , pp. 567-573
    • Drew, H.1    Takano, T.2    Itakura, K.3    Dickerson, R.E.4
  • 13
    • 0028221644 scopus 로고
    • Comparative studies of high resolution Z-DNA crystal structures. Part I: Common hydration patterns of alternating dC-dG
    • Gessner, R. V., G. J. Quigley, and M. Egli. 1994. Comparative studies of high resolution Z-DNA crystal structures. Part I: Common hydration patterns of alternating dC-dG. J. Mol. Biol. 236:1154-1168.
    • (1994) J. Mol. Biol. , vol.236 , pp. 1154-1168
    • Gessner, R.V.1    Quigley, G.J.2    Egli, M.3
  • 14
    • 0022427781 scopus 로고
    • GT wobble base-pairing in Z-DNA at 1.0 angstrom atomic resolution: The crystal structure of d(CGCGTG)
    • Ho, P. S., C. A. Frederick, G. J. Quigley, G. A. van der Marel, J. H. van Boom, A. H. -J. Wang, and A. Rich, 1985. GT wobble base-pairing in Z-DNA at 1.0 angstrom atomic resolution: the crystal structure of d(CGCGTG). EMBO J. 4:3617-3623.
    • (1985) EMBO J. , vol.4 , pp. 3617-3623
    • Ho, P.S.1    Frederick, C.A.2    Quigley, G.J.3    Van Der Marel, G.A.4    Van Boom, J.H.5    Wang, A.H.J.6    Rich, A.7
  • 16
    • 84988072575 scopus 로고
    • Abbreviations and symbols for the description of conformations of polynucleotide chains
    • IUPAC-IUB Joint Commission in Biochemistry Nomenclature. 1983. Abbreviations and symbols for the description of conformations of polynucleotide chains. Eur. J. Biochem 131:9-15.
    • (1983) Eur. J. Biochem , vol.131 , pp. 9-15
  • 17
    • 0023645483 scopus 로고
    • The potentially Z-DNA-forming sequence d(GTGTACAC) crystallizes as A-DNA
    • Jain, S. C., G. Zon, and M. Sundaralingam. 1987. The potentially Z-DNA-forming sequence d(GTGTACAC) crystallizes as A-DNA. J. Mol. Biol. 197:141-145.
    • (1987) J. Mol. Biol. , vol.197 , pp. 141-145
    • Jain, S.C.1    Zon, G.2    Sundaralingam, M.3
  • 18
    • 0026577240 scopus 로고
    • Crystal structure at 1.5 angstroms resolution of d(CGCICICG), an octanucleotide containing inosine. and its comparison with d(CGCG) and d(CGCGCG) structures
    • Kumar, V. D., R. W. Harrison, L. C. Andrews, and I. T. Weber. 1992. Crystal structure at 1.5 angstroms resolution of d(CGCICICG), an octanucleotide containing inosine. and its comparison with d(CGCG) and d(CGCGCG) structures. Biochemistry. 31:1541-1550.
    • (1992) Biochemistry , vol.31 , pp. 1541-1550
    • Kumar, V.D.1    Harrison, R.W.2    Andrews, L.C.3    Weber, I.T.4
  • 19
    • 0027155070 scopus 로고
    • Orthorhombic crystal structure of the A-DNA octamer d(GTACGTAC). Comparison with the tetragonal structure
    • Langlois, D. B., A. Dautant, C. Courseille, and G. Precigoux. 1993. Orthorhombic crystal structure of the A-DNA octamer d(GTACGTAC). Comparison with the tetragonal structure. Eur. J. Biochem. 213: 673-682.
    • (1993) Eur. J. Biochem. , vol.213 , pp. 673-682
    • Langlois, D.B.1    Dautant, A.2    Courseille, C.3    Precigoux, G.4
  • 20
    • 0029076479 scopus 로고
    • Alternating and non-alternating dG-dC hexanucleotides crystallize as canonical A-DNA
    • Mooers, B. H. M., G. P. Schroth, W. W. Baxter, and P. S. Ho. 1995. Alternating and non-alternating dG-dC hexanucleotides crystallize as canonical A-DNA. J. Mol. Biol. 249:772-784.
    • (1995) J. Mol. Biol. , vol.249 , pp. 772-784
    • Mooers, B.H.M.1    Schroth, G.P.2    Baxter, W.W.3    Ho, P.S.4
  • 21
    • 0021770610 scopus 로고
    • Short oligodeoxynudeotides with d(G-C)n sequence do not assume left-handed conformation in high salt conditions
    • Quadrifoglio, F., G. Manzini, and N. Yathindra. 1984. Short oligodeoxynudeotides with d(G-C)n sequence do not assume left-handed conformation in high salt conditions. J. Mol. Biol. 175:419-423.
    • (1984) J. Mol. Biol. , vol.175 , pp. 419-423
    • Quadrifoglio, F.1    Manzini, G.2    Yathindra, N.3
  • 23
    • 0027715217 scopus 로고
    • Structure and thermodynamics of nonalternating C-G base pairs in Z-DNA: The 1.3 Å crystal structure of the asymmetric hexanucleotide d(m5CGGGm5CG)-d(m5CGCCm5CG)
    • Schroth, G. P., T. F. Kagawa, and P. S. Ho. 1993. Structure and thermodynamics of nonalternating C-G base pairs in Z-DNA: the 1.3 Å crystal structure of the asymmetric hexanucleotide d(m5CGGGm5CG)-d(m5CGCCm5CG). Biochemistry. 32:13,381-13,392.
    • (1993) Biochemistry , vol.32 , pp. 13381-13392
    • Schroth, G.P.1    Kagawa, T.F.2    Ho, P.S.3
  • 24
    • 0025215930 scopus 로고
    • The crystal structure of d(GTACGTAC) at 2.25 angstroms resolution. Are the A-DNA's always unwound approximately 10 degrees at the C-G steps?
    • Takusagawa, T. 1990. The crystal structure of d(GTACGTAC) at 2.25 angstroms resolution. Are the A-DNA's always unwound approximately 10 degrees at the C-G steps? J. Biomol. Struct. Dyn. 7:795-809.
    • (1990) J. Biomol. Struct. Dyn. , vol.7 , pp. 795-809
    • Takusagawa, T.1
  • 25
    • 0021227193 scopus 로고
    • AT base pairs are less stable than GC base pairs in Z-DNA: The crystal structure of d(m(5)CGTAm(5)CG)
    • Wang, A. H.-J., T. Hakoshima, G. A. van der Marel, J. H. van Boom, and A. Rich. 1984. AT base pairs are less stable than GC base pairs in Z-DNA: the crystal structure of d(m(5)CGTAm(5)CG). Cell. 37: 321-331.
    • (1984) Cell , vol.37 , pp. 321-331
    • Wang, A.H.-J.1    Hakoshima, T.2    Van Der Marel, G.A.3    Van Boom, J.H.4    Rich, A.5
  • 27
    • 0019875825 scopus 로고
    • Left-handed double helical DNA: Variations in the backbone conformation
    • Wang, A. H.-J., G. A. van der Marel, R. V. Gessner, and A. Rich, 1981. Left-handed double helical DNA: variations in the backbone conformation. Nature (Lond.). 211:171-176.
    • (1981) Nature (Lond.) , vol.211 , pp. 171-176
    • Wang, A.H.-J.1    Van Der Marel, G.A.2    Gessner, R.V.3    Rich, A.4
  • 28
    • 0011205264 scopus 로고
    • Structure of an alternating-B DNA helix and its relationship to A-tract DNA
    • Yoon, C., G. G. Prive, D. S. Goodsell, and R. E. Dickerson. 1988. Structure of an alternating-B DNA helix and its relationship to A-tract DNA. Proc. Nad. Acad. Sci. USA. 85:6332-6336.
    • (1988) Proc. Nad. Acad. Sci. USA , vol.85 , pp. 6332-6336
    • Yoon, C.1    Prive, G.G.2    Goodsell, D.S.3    Dickerson, R.E.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.