Probing the protein-DNA contacts of a yeast RNA polymerase III transcription complex in a crude extract: Solid phase synthesis of DNA photoaffinity probes containing a novel photoreactive deoxycytidine analog

Biochemistry

Volumn 35, Issue 30, 1996, Pages 9821-9831

  Lannutti, Brian J ^a,b   Persinger, Jim ^a   Bartholomew, Blaine ^a  

^a SOUTHERN ILLINOIS UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b CHILDREN'S MEMORIAL HOSPITAL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA BINDING PROTEIN; DNA DIRECTED RNA POLYMERASE III; TRANSCRIPTION FACTOR;

ARTICLE; DNA PROBE; DNA SYNTHESIS; PHOTOAFFINITY LABELING; PHOTOREACTIVITY; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DNA INTERACTION; TRANSCRIPTION INITIATION; YEAST;

AFFINITY LABELS; BASE SEQUENCE; DEOXYCYTIDINE; DEOXYCYTOSINE NUCLEOTIDES; DNA PROBES; MACROMOLECULAR SUBSTANCES; MOLECULAR SEQUENCE DATA; MUTAGENESIS, SITE-DIRECTED; PROTEIN BINDING; RNA POLYMERASE III; SACCHAROMYCES CEREVISIAE; TRANSCRIPTION FACTOR TFIIIB; TRANSCRIPTION FACTORS; TRANSCRIPTION FACTORS, TFIII; TRANSCRIPTION, GENETIC;

EID: 0029743935     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi960525x     Document Type: Article

References (19)

1. Bartholomew, B., Kassavetis, G. A., Braun, B. R., & Geiduschek, E. P. (1990) EMBO J. 9, 2197-2205.
2. Bartholomew, B., Kassavetis, G. A., & Geiduschek, E. P. (1991) Mol. Cell. Biol. 11, 5181-5189.
3. Bartholomew, B., Durkovich, D., Kassavetis, G. A., & Geiduschek, E. P. (1993) Mol. Cell. Biol. 13, 942-952.
4. Bartholomew, B., Tinker, R. L., Kassavetis, G. A., & Geiduschek, E. P. (1995) Methods Enzymol. 262, 476-494.
5. Braun, B. R., Bartholomew, B., Kassavetis, G. A., & Geiduschek, E. P. (1993) J. Mol. Biol. 228, 1063-1077.
6. Dieci, G., Duimio, L., Codazabetta, F., Sprague, K. U., & Ottonello, S. (1993) J. Biol. Chem. 268, 11199-11207.
7. Draper, D. E. (1984) Nucleic Acids Res. 12, 989-1002.
8. Geiduschek, E. P., & Kassavetis, G. A. (1992) in Transcriptional Regulation. (McKnight, S. L., & Yamamoto, K. R., Eds.) Cold Spring Harbor Laboratory Press, Plainview, NY.
9. Kassavetis, G. A., Riggs, D. L., Negri, R., Nguyen, L. H., & Geiduschek, E. P. (1989) Mol. Cell. Biol. 9, 2551-2566.
10. Kassavetis, G. A., Braun, B. R., Nguyen, L. H., & Geiduschek, E. P. (1990) Cell 60, 235-245.
11. Kassavetis, G. A., Bartholomew, B., Blanco, J. A., Johnson, T. E., & Geiduschek, E. P. (1991) Proc. Natl. Acad. Sci. U.S.A. 88, 7308-7312.
12. Kassavetis, G. A., Blanco, J. A., Johnson, T. E., & Geiduschek, E. P. (1992) J. Mol. Biol. 226, 47-58.
13. Kassavetis, G. A., Bardeleben, C., Bartholomew, B., Braun, B. R., Joazeiro, C. A. P., Pisano, M., & Geiduschek, E. P. (1994) in Transcription: Mechanisms and Regulation. Conaway, R. C., & Conaway, J. W., Eds.) Raven Press, Ltd., New York.
14. Kassavetis, G. A., Nguyen, S. T., Kobayashi, R., Kumar, A., & Geiduschek, E. P. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 9786-9790.
15. Sadhale, P. P., & Woychik, N. A. (1994) Mol. Cell. Biol. 14, 6164-6170.
16. Schultz, M. C., Choe, S. Y., & Reeder, R. H. (1991) Proc. Natl. Acad. Sci. U.S.A. 88, 1004-1008.
17. Sentenac, A., Riva, M., & Thuriaux, P. (1992) in Transcriptional Regulation, (McKnight, S. L., & Yamamoto, K. R., Eds.) Cold Spring Laboratory Press, Plainview, NY.
18. Thuillier, V., Stettler, S., Sentenac, A., Thuriaux, P., & Werner, M. (1995) EMBO J. 14, 351-359.
19. Young, R. A. (1991) Annu. Rev. Biochem. 60, 689-715.