Circular dichroism evidence for the presence of burst-phase intermediates on the conformational folding pathway of ribonuclease A

Biochemistry

Volumn 35, Issue 31, 1996, Pages 10125-10133

  Houry, Walid A ^a   Rothwarf, David M ^a   Scheraga, Harold A ^a  

^a Department of Population Medicine and Diagnostic Sciences   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GUANIDINE; RIBONUCLEASE A;

ANIMAL CELL; ARTICLE; BURST FORMING UNIT; CATTLE; CIRCULAR DICHROISM; ENZYME CONFORMATION; ENZYME KINETICS; ENZYME PURIFICATION; HYDROPHOBICITY; ISOMERISM; MATHEMATICAL COMPUTING; NONHUMAN; PRIORITY JOURNAL; PROTEIN FOLDING; PROTEIN SECONDARY STRUCTURE;

ANIMALS; CATTLE; CIRCULAR DICHROISM; GUANIDINE; GUANIDINES; KINETICS; PANCREAS; PROTEIN CONFORMATION; PROTEIN DENATURATION; PROTEIN FOLDING; RIBONUCLEASES; TIME FACTORS;

ANIMALIA; BOS TAURUS; BOVINAE;

EID: 0029738416     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi960617m     Document Type: Article

References (52)

1. Adler, M., & Scheraga, H. A. (1988) Biochemistry 27, 2471-2480.
2. Baldwin, R. L. (1995) J. Biomol. NMR 5, 103-109.
3. Baldwin, R. L. (1996) Folding Des. 1, R1-R8.
4. Brandts, J. F., Halvorson, H. R , & Brennan, M. (1975) Biochemistry 14, 4953-4963.
5. Bryngelson, J. D., Onuchic, J. N., Socci, N. D., & Wolynes, P. G. (1995) Proteins: Struct., Funct., Genet. 21, 167-195.
6. Buckler, D. R., Haas, E., & Scheraga, H. A. (1995) Biochemistry 34, 15965-15978.
7. Caceci, M. S., & Cacheris, W. P. (1984) BYTE 9, 340-362.
8. Chakrabartty, A., Kortemme, T., Padmanabhan, S., & Baldwin, R. L. (1993) Biochemistry 32, 5560-5565.
9. Chavez, L. G., Jr., & Scheraga, H. A. (1980) Biochemistry 19, 1005-1012.
10. Creighton, T. E., Darby, N. J., & Kemmink, J. (1996) FASEB J. 10, 110-118.
11. Dill, K. A., Bromberg, S., Yue, K., Fiebig, K. M., Yee, D. P., Thomas, P. D., & Chan, H. S. (1995) Protein Sci. 4, 561-602.
12. Dodge, R. W., & Scheraga, H. A. (1996) Biochemistry 35, 1548-1559.
13. Dyson, H. J., Rance, M., Houghten, R. A., Lerner, R. A., & Wright, P. E. (1988) J. Mol. Biol. 201, 161-200.
14. Fersht, A. R. (1993) FEBS Lett. 325, 5-16.
15. Gryk, M. R., & Jardetzky, O. (1996) J. Mol. Biol. 255, 204-214.
16. Guijarro, J. I., Jackson, M., Chaffotte, A. F., Delepierre, M., Mantsch, H. H., & Goldberg, M. E. (1995) Biochemistry 34, 2998-3008.
17. Hao, M.-H., & Scheraga, H. A. (1995) J. Chem. Phys. 102, 1334-1348.
18. Hider, R. C., Drake, A. F., & Tamiya, N. (1988) Biopolymers 27, 113-122.
19. Horwitz, J., Strickland, E. H., & Billups, C. (1970) J. Am. Chem. Soc. 92, 2119-2129.
20. Houry, W. A., Rothwarf, D. M., & Scheraga, H. A. (1994) Biochemistry 33, 2516-2530.
21. Houry, W. A., Rothwarf, D. M., & Scheraga, H. A. (1995) Nat. Struct. Biol. 2, 495-503.
22. Johnson, W. C., Jr. (1990) Proteins: Struct., Fund., Genet. 7, 205-214.
23. Kahn, P. C. (1979) Methods Enzymol. 61, 339-378.
24. Karplus, M., & Sali, A. (1995) Curr. Opin. Struct. Biol. 5, 58-73.
25. Kemmink, J., & Creighton, T. E. (1995) J. Mol. Biol. 245, 251-260.
26. Kiefhaber, T., & Baldwin, R. L. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 2657-2661.
27. Kim, P. S., & Baldwin, R. L. (1984) Nature 307, 329-334.
28. Kim, P. S., & Baldwin, R. L. (1990) Annu. Rev. Biochem. 59, 631-660.
29. Konishi, Y., & Scheraga, H. A. (1980) Biochemistry 19, 1308-1316.
30. Manning, M. C., & Woody, R. W. (1989) Biochemistry 28, 8609-8613.
31. Matthews, C. R. (1993) Annu. Rev. Biochem. 62, 653-683.
32. Montelione, G. T., & Scheraga, H. A. (1989) Acc. Chem. Res. 22, 70-76.
33. Nall, B. T. (1994) in Mechanisms of Protein Folding (Pain, R. H., Ed.) pp 80-103, Oxford University Press, New York.
34. Neubert, L. A., & Carmack, M. (1974) J. Am. Chem. Soc. 96, 943-945.
35. Nozaki, Y. (1972) Methods Enzymol. 26, 43-50.
36. Osterhout, J. J., Jr., Baldwin, R. L., York, E. J., Stewart, J. M., Dyson, H. J., & Wright, P. E. (1989) Biochemistry 28, 7059-7064.
37. Rothwarf, D. M., & Scheraga, H. A. (1993) Biochemistry 32, 2671-2679.
38. Santoro, J., González, C., Bruix, M., Neira, J. L., Nieto, J. L., Herranz, J., & Rico, M. (1993) J. Mol. Biol. 229, 722-734.
39. Santoro, M. M., & Bolen, D. W. (1988) Biochemistry 27, 8063-8068.
40. Scheraga, H. A. (1967) Fed. Proc. 26, 1380-1387.
41. Scheraga, H. A. (1992) in Reviews in Computational Chemistry (Lipkowitz, K. B., & Boyd, D. B., Eds.) Vol. 3, pp 73-142, VCH Publishers, Inc., New York.
42. Schmid, F. X. (1986) Methods Enzymol. 131, 70-82.
43. Schultz, D. A., Schmid, F. X., & Baldwin, R. L. (1992) Protein Sci. 1, 917-924.
44. Sela, M., & Anfinsen, C. B. (1957) Biochim. Biophys. Acta 24, 229-235.
45. Silverman, D. N., Kotelchuck, D., Taylor, G. T., & Scheraga, H. A. (1972) Arch. Biochem. Biophys. 150, 757-766.
46. Swadesh, J. K., Montelione, G. T., Thannhauser, T. W., & Scheraga, H. A. (1984) Proc. Natl. Acad. Sci. U.S.A. 81, 4606-4610.
47. Takagi, T., & Izutsu, T. (1974) J. Biochem. (Tokyo) 75, 441-446.
48. Thomas, D. J. (1992) FEBS Lett. 307, 10-13.
49. Wlodawer, A., Bott, R., & Sjölin, L. (1982) J. Biol. Chem. 257, 1325-1332.
50. Wlodawer, A., Svensson, L. A., Sjölin, L., & Gilliland, G. L. (1988) Biochemistry 27, 2705-2717.
51. Woody, R. W. (1978) Biopolymers 17, 1451-1467.
52. Woody, R. W. (1995) Methods Enzymol. 246, 34-71.